Oncorhynchus kisutch (coho salmon): 109885821
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Entry
109885821 CDS
T09179
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oki04054
]
109885821
Pattern recognition receptors [BR:
oki04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109885821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
PRY
NOD2_WH
SPRY
LRR_6
PYRIN
LRR_4
Motif
Other DBs
NCBI-GeneID:
109885821
NCBI-ProteinID:
XP_031675548
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MSLSGEREEVGPDSKMNVSGEREEGGPASKMILSGEREEGGPASKMSLSGEREEDVPASK
MSLSGEHDSKVKRGVFPYMSPIKEERPASPVPSCVSLKSDWSMSQPLNFREGDFSTEQRP
IKQEKPASPVPSCVSMKSDQSMGHPIYFREGDFSTEQRNQQERSESEILSGQSSQSHQTD
LSSIFSLLEENIQTFVKNELKMFKRILSPELPEGFESQKQDKEVVDAEDEKQESSAREGA
LKITLHILRKMNQKELADTLEKYSDDPSVICQHEFKSNLKKKFQCVFEGIAKQGNPTLLN
KIYTELYITEGGTGEVNKEHELRQIETTTRKHARPETAIKCNDIFKPLTGQDKRIRTVLT
KGVAGIGKTVSVQKFILDWAEGKANQDVQFVFSFPFRELNLMKDEKITLIELLNHFSMET
KQSRISNYNKYKVLFIFDGLDECRLPLDFQKNKICCDVTGSTSVDVLLTNLIKGNLLPSA
LLWITTRPAAANKIPSGCVDQVTEVRGFNDRQKEEYFRKRFSDEDLASRIVSHIKTSRIL
HIMCHIPVFCWISAIVLEHMLKHEREEMPKTLTEMYTHLVEFHTKQKNEKYLGREETGPH
WNKESILSLGKLAFQQLVNGNLIFYEEDLKEAGIDVNEASVYSGLCTQLFKEECGLYQDK
VYCFVHLSIQEFLAAEYVFLSFINNNENLLANPRSTSRNLSVLFRDKHKLTVYRSAVDKA
LQSETGNLDLFLRFLLGLSLESNQKHLHGLLTKTRSRSQSHETTVKYIKEKIRKNPSPER
SINLFHCLNELNDHSLVEEIQSYLRAGSLSRAQLSPAQWSALVFVLLTSEKELDVFDLKK
YSRSEEGLLRLLPVVKASRAALLSGCGVTEEGCASLVSALRSNPSHLRELDLSNNDLKDS
GVKLLSDGLGNPHCKLETLRLSGCLVTEEGCASLVSALRSNPSYLRELDLSYNHPGDSGV
RLLSAGLEDPHCRLEKLNVEHGGENRMKPGLRKYACDLTLDPNTVHRLLSLSEENRKVTR
RTEEQPYPDHPERFEDCEQVLCREGLTGRCYWEVEWSGIMGADIGVTYKGINRRGGGIDC
WLGYNDKSWSLFCYDNGYYARHNNKPTTIDIPSSSSHRVGVYLDWPAGTLSFYRASSDTL
THLITFTSTFTEPLYPGFRVCYEDDLYGYSSVSLTYTH
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagcctctctggggagagagaggaggtgggccctgactctaaaatgaatgtctctggg
gagagagaggaggggggccctgcctctaaaatgatcctctctggggaaagagaggagggg
ggccctgcctctaaaatgagtctctctggggagagagaagaggatgtccctgcctctaaa
atgagtctctcaggggaacatgacagcaaagttaagaggggggtgttcccttacatgagc
ccaatcaaggaggagagaccagcctcccctgttcccagctgtgtgtccctgaagagtgac
tggtctatgagtcaacctctaaactttagagagggagatttttctactgaacaaagacca
atcaagcaggagaaaccagcctcccctgttcccagctgtgtgtccatgaagagtgaccag
tctatgggtcatcctatatactttagagagggagacttttctactgaacaaagaaaccaa
caggagagatcagagtcagagattctcagtggtcagtcttcccagagtcatcaaacagac
ctgtcctccatattcagtttgcttgaagagaatattcagacttttgtgaagaacgagctg
aagatgttcaagaggattcttagtccagaactcccagaaggctttgagagtcagaagcag
gataaggaagtggtggatgctgaagatgagaagcaggagagcagtgccagagagggggct
ctgaagatcacactgcacatcctgaggaaaatgaaccagaaggagcttgctgacacactg
gagaaatattcagatgatccttctgtgatttgccaacatgaattcaaatctaatctaaag
aagaagtttcaatgtgtatttgaggggatcgctaaacaaggaaacccaacacttctcaat
aagatctacacagagctctacatcacagagggtggaacaggagaggtcaataaggaacat
gagctgagacagattgagacaacaaccaggaaacatgcaagaccagagactgcaatcaaa
tgtaacgacatcttcaaacccttaactggacaagacaaacgtatcagaactgtgctgaca
aagggagttgctggcattggaaaaacagtctctgtgcagaagttcattctggactgggct
gaaggaaaagcaaatcaggatgtccaatttgtattttcattccctttccgggagttgaat
ttgatgaaagatgaaaaaatcactttgattgaacttctcaatcacttctcaatggaaacc
aaacaatcaagaatctccaactacaacaagtacaaagttctgttcatctttgatggtctg
gatgagtgccgactgcccctagacttccagaagaacaagatctgttgtgacgtcacaggg
tcaacctcagtggatgttctgctgacaaatctcatcaagggaaatttgcttccctctgct
ctcctctggataactacccgacctgcagcagccaataagatcccttcagggtgtgttgac
caggtgacagaggtacgagggttcaatgaccgacagaaggaggagtacttcaggaagaga
ttcagtgatgaggacctggccagcagaatcgtctcacacataaagacatcaaggatcctt
cacatcatgtgccacattccagtcttctgttggatttctgcaatagtccttgaacacatg
ctgaaacatgagagagaagagatgccgaagactctgacagagatgtacacacaccttgta
gagtttcataccaaacagaagaatgaaaagtatcttgggagagaagagacaggtccacac
tggaataaagagagcattctgtcactgggaaaactagcttttcaacagcttgtgaatggc
aatctgattttctatgaagaagacctgaaagaggctggcattgatgtcaatgaagcctca
gtgtactcaggattgtgcacacagctctttaaagaggaatgtggtctgtaccaggacaag
gtgtactgcttcgtgcatctgagcattcaggagtttctggctgctgaatatgtgttccta
tcattcatcaacaacaatgagaatctattggccaatcctcgatcaacatccaggaacctt
tctgtgctgttcagagacaagcataaacttactgtctacaggagtgctgtggataaagcc
ttacaaagtgagacaggaaacctggaccttttcctccgcttccttctgggcctctcactg
gagtccaatcagaagcacttacatggtctactgacaaagacaagaagcagatcacagagc
catgaaacaacagtcaagtacatcaaggagaagatcaggaagaatccctctccagagagg
agcatcaatctgttccactgtctgaatgaactgaatgaccattctctagtggaggagatc
caaagctacctgagagcaggaagtctctctagagcccaactgtcacctgcacagtggtca
gctctggtctttgtgttgctgacatcagaaaaggagctggatgtgtttgacctgaagaaa
tactccagatcagaggaaggtcttctgaggctgctgccagtggtcaaagcctccagagct
gctctgctgtcaggctgtggagtcacagaggaaggttgtgcttctctggtctcagctctg
aggtccaacccctcacacctgagagagctggatctgagtaacaatgacctgaaggattca
ggagtgaagctgctctctgatggactggggaatccccactgtaaactggagactctgagg
ctgtcaggctgtctagtcacagaggaaggctgtgcttctctggtctcagctctgaggtca
aacccctcatacctgagagagctggacctgagctacaatcacccaggagactcaggagtc
agactgctctctgctggactggaggatccacactgcagactggagaaactcaatgtggaa
catggtggagagaacagaatgaaacctggacttagaaaatatgcctgtgatctcacactg
gacccaaacacagtacacagactcctctctctctctgaggagaacagaaaggtgacacgg
aggacagaggagcagccgtatcctgatcacccagagagatttgaggactgtgaacaggtg
ctgtgtagagagggtctgactgggcgctgttactgggaggtagagtggagtgggataatg
ggggctgatataggagtgacatataaaggaatcaacaggagaggagggggtattgactgt
tggcttggatacaatgacaagtcctggagtctgttctgctatgacaacggttactatgcc
aggcacaataataaacccactaccatagacatcccctcctccagctcccacagagtagga
gtgtatctggactggccagctggcactctgtccttctatagagcctcctctgacacactg
acccacctgatcacattcacctccacattcactgagcccctctatccagggtttagagtt
tgttatgaggatgacttatatgggtattcctcagtgtccctgacatacacacactga
DBGET
integrated database retrieval system
