Oncorhynchus kisutch (coho salmon): 109885978
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Entry
109885978 CDS
T09179
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic-like isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109885978
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oki01007
]
109885978
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oki03016
]
109885978
Enzymes [BR:
oki01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
109885978
Amino acid related enzymes [BR:
oki01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
109885978
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
109885978
Prokaryotic type
109885978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-GeneID:
109885978
NCBI-ProteinID:
XP_031693612
Ensembl:
ENSOKIG00005001205
LinkDB
All DBs
Position
LG2:complement(3926115..3956119)
Genome browser
AA seq
693 aa
AA seq
DB search
MLVTVMLRFPVCRPSVRAVLHCQRRFSKIQASTALSERVRVFESLRERQGQQRTSGTTKQ
AFSVRLADGRTVNGTTGVTTPSIIAQNACVKGALVCRVNGELWELLRPLEADCELQLLGF
NTTEGKQAVWRTGACVVGWVLERVFGVEVCREGVSESGLYCDHLPENSALSLAELEDRCK
EAAGQKLPLSRLELNRQEVTELFQDNALRLQLIEEQMSGPTVTVYRCGDSIGVCNGPLLP
NTALLKVFKMLQVSPVTLTNPVGTSGVMRVMGVAFPREKEREEWEREQEETRKRDHRRIG
KDQELFFFNDVSPGSCFFLPKGAHIYNTLADFIRTEYRRRGFHEVVTPTLYSTALWERSG
HWEHYSENMFTVTGDTHTYALKPMNCPAHCLMFEQRVRSWRELPLRWADFGALHRNELSG
ALGGLTRVRRFCQDDAHIFCTPEQLEEEIIACLDFVRSVYRVFGFSFHCLLSTRPTPCLG
EPALWDHAEQQLERSLQQFGERWQFNPGDGAFYGPKIDIQIKDAIGRQHQCATIQLDFQL
PIRFDLQYVGGDGETHRPVMVHRAVLGSLERMIAILAENFSGKWPLWLSPAQVMIIPVGG
GSESYAQQVVRQFREAGFMADADDDHGATLNKKIRSAQLAQYNYIFVVGEKECVSGTVSV
RTRGGKQLGRRPTEKVLASLTHLRDARSNQDDF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgaccgtgatgttacggtttcccgtctgtcggccgtcagttcgggcagtgctt
cactgtcagaggcgctttagcaagatacaggcatccactgctttgtctgagcgcgtgcgg
gtctttgagtctctcagagagaggcagggacagcagaggacaagcggcaccacgaaacag
gccttcagcgtccgattggctgatggcaggacggtgaatggcaccacaggcgtgaccacg
ccctcaatcatcgctcagaacgcatgtgtgaaaggtgctctggtctgcagggtgaatgga
gagctgtgggagctgcttcgccccctggaggctgactgtgaactacagctgctaggcttc
aacaccacagagggcaaacaggcggtgtggaggacaggagcgtgtgttgtggggtgggtg
ttagagagggtgtttggggtggaagtgtgcagagagggtgtgtcagagtctggcctctac
tgtgaccacctcccggagaacagtgccctgtccctagctgagctagaggatagatgtaag
gaggccgctggccagaagcttcctctctccaggctggagctgaacaggcaggaagttaca
gagctcttccaggacaatgcactgagactccagttgattgaagaacagatgagtggtcct
actgtcacagtctacaggtgtggagacagcataggagtctgcaatggtcctctcctccct
aacactgctctcctcaaggtcttcaagatgctgcaggtgtctcccgtaacgttgaccaat
cctgttggcacgtcaggcgtgatgcgtgtgatgggtgtggccttcccaagagagaaggag
agggaggagtgggagagggaacaggaggagacacggaagagagaccacagacgcatcggc
aaggaccaggagctgttcttctttaatgacgtcagtcctggaagctgcttcttcctgcct
aaaggagctcacatctacaacacactcgctgactttatcaggactgagtacaggaggcgt
ggcttccatgaggttgtgacccctactctatacagcactgcactgtgggagcgttcgggt
cactgggaacactacagtgaaaacatgtttactgtgaccggtgacacacacacctatgca
ctcaaacccatgaactgtcctgcacactgtctgatgtttgagcagcgtgtaaggtcatgg
agggagctccccttgcgttgggccgatttcggggcactgcatcggaacgaactgtccggc
gctctgggtggtctcacccgggtccgcaggttctgccaggacgacgcacacatcttctgc
actcctgagcagttggaggaggagatcatagcgtgtttggactttgtgaggagtgtgtat
cgagtttttggattctccttccactgtctcctctccacccgacctacaccctgcctgggg
gagcctgcactgtgggaccatgctgagcagcagttggagaggagtctgcagcagtttgga
gagcgctggcagttcaacccaggagatggagcgttctacgggccgaagattgacatccag
atcaaggacgccattggtcgacagcaccagtgtgccaccatccaattggacttccagcta
ccaatcagatttgacctgcagtatgtggggggggatggagagacccacagaccagtgatg
gtccacagagctgttctgggatctctggaacgcatgatcgctatattggctgagaatttt
tcggggaaatggcctctgtggttgtctccagcgcaggtcatgattattcctgtaggggga
ggtagtgagtcatatgcgcaacaggtggtccgacagttccgtgaggccggcttcatggct
gacgcggatgatgaccacggtgccaccttaaataagaaaatccgctctgcacagctggcc
cagtacaactacatatttgtggtaggcgagaaggagtgtgtgagtggcacggtgagtgta
aggaccagaggggggaagcagctagggaggagaccgacagagaaggtcctggcatcactc
acacacctacgagatgcacggagcaaccaggatgacttctaa
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