Oncorhynchus kisutch (coho salmon): 109886001
Help
Entry
109886001 CDS
T09179
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04519
Cadherin signaling
oki04810
Regulation of actin cytoskeleton
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
109886001 (cyfip1)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109886001 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109886001 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109886001 (cyfip1)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109886001 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
109886001 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
MauJ
CsiV
Motif
Other DBs
NCBI-GeneID:
109886001
NCBI-ProteinID:
XP_031678129
Ensembl:
ENSOKIG00005013096
UniProt:
A0A8C7M651
LinkDB
All DBs
Position
LG4:1517321..1649478
Genome browser
AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPCSLMYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRLAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGHDELLAD
IVNLCVDYYENRMYLTPNEKHMLLKVMGFGLYLMDGSNSNIYKMDAKKRINLIKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKNRWSCTSTGSSPQYNICEQMVQIREDHMRFI
SELARYSNSEVVTGSGRQDAHKTDHEYRKLFDLALQGMQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTIEEKFALVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFAQLTLRDPLRQAIKKKKSVVQSVLQAIRKTICDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSCLEGPTIMDMEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRADCKNQGANIPWPASNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALYKSL
ELAINRFESEDLTSIVELEGLMNINRMTHKLLSKFLTLDSMDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKPPNAQPQYLYGSKALNLAYSS
IFGFYRHFVGPPHIKAMCRLLGYQGIAVVMEELLKVVKSLLQGTIMQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNALLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLETKYTALHLVPLIERLGTPQQIAITREGDL
LTKERLCCGLSMFEVILTRVRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIISLLGQQRRFDILDFSYHLLKVQKHDGKDEIIKSVP
LKKMVDRIHKFQVLNDEIYAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacagtgaccctggaggatgctctgtccaatgtggaccttctggaggagctg
cctctcccagaccagcagccctgcatcgagcccctgccctgctccctcatgtaccagccc
aacttcaacaccaacttcgaagaccgtaatgcctttgtgacggggatcgccagatatatc
gagcaggccaccgtccactctagcatgaatgagatgctggaggagggccaggagtatgct
gtgatgctgtacacgtggaggagctgctctcgagctatcccacaggtgaagtgtaatgag
cagcccaacagagtggagatctatgagaagacagtggaggtgctggagcctgaggtcacc
aagctcatgaactttatgtacttccagcgattggctatagaccggttctgtggggaggtg
cgtcgtctctgccacgctgagaggaggaaggactttgtctccgaggcctacctcctgacc
ttggggaagttcatcaacatgttcgctgtgctggatgaactcaagaacatgaagtgtagc
gtcaagaacgaccactctgcatacaaacgagctgcccagttcctcaggaaaatgtcagaa
ccctcatccatccaggaatctcagaacctctccatgtttctggccaaccacaacaagatc
actcagtctctgcagcagcagttggaggtgattaacggccacgatgagctgctggctgac
atagtcaacctgtgtgttgattactatgagaacaggatgtacctgacccccaacgagaaa
cacatgctgctcaaggtgatggggtttggtctgtacctgatggatggcagtaacagcaac
atctacaaaatggacgccaagaagaggatcaacctgatcaagattgacaagttcttcaag
caactgcaggtggtgcctctgtttggtgacatgcagattgagctgtccaggtacatcaag
accagcgcacactttgaagagaacaagaaccggtggtcatgtacctcaacaggcagcagt
cctcagtataatatctgtgagcagatggttcagatcagggaagaccacatgaggttcatc
tctgagctggctcgctacagtaacagtgaggtggtgacggggtccggtcgtcaggatgcc
cacaagacagaccatgagtacaggaagctttttgacttggctctgcaggggatgcagcta
ctgtcccagtggagcgcacatgtcatggaagtgtactcgtggaagctggttcatccaacg
gataagtactcgaacaaggagtgtcctgacaacgcggaggagtatgaacgagctacacga
tacaactacaccattgaggagaagtttgcccttgtcgaggtgatggccatgataaagggt
ttacaggtcctgatgggtcgtatggagtcggtgtttaaccacgctatccgccataccatc
tactcagccctgcaggacttcgcccagctcaccctgagagacccgctacggcaggccatc
aagaagaagaagagcgtggtgcagagtgtcctgcaggccatcaggaagaccatctgtgat
tgggagacagggcgtgagccccacaatgaccctgccctgcgaggagagaaagaccccaag
ggaggctttgacatcaaggtcccccgccgtgccgtcggcccctccagcacacagctgtac
atggttcgtaccatgctggagtctctgatagctgataaaagtggttctaagaagaccctc
cgcagctgtctggagggacccaccatcatggacatggagaagttccacagagagtccttc
ttctatactcacctgctcaacttcagcgagaccctacagcagtgctgtgacctgtctcag
ctgtggttcagagagttcttcctggagctgaccatggggcgcaggatccagttccccatc
gagatgtccatgccctggatcctcacagaccacatactggagaccaaggaggcctctatg
atggagtatgtgctgtatcctctggacctctataatgacagtgcccactacgccctgacc
aagttcaagaagcagttcctctacgatgagatagaagcagaggtcaacctgtgtttcgat
cagtttgtctacaagctggctgatcagatatttgcctactacaagattctagctggaagt
ctgttgctggacaagcgtctgagagcggactgtaagaaccagggagccaacatcccctgg
cctgcgtccaaccgctacgagaccctgctgaaacagcgccatgtacagctgctgggtcgt
tccatagacctgaaccgtctgatcacccagagagtgtctgctgctctctacaagtctctg
gagctggccatcaaccgctttgagagcgaggacctcacatccatcgtggaactagaaggt
ctgatgaacatcaaccgtatgacccacaagctgctgtctaagttcctgacgctggacagt
atggacgccatgttccgggaggcaaatcacaatgtctccgccccctacggacgcatcaca
ctccatgtcttctgggaactcaactacgatttcctccccaactactgctacaacggatct
actaacaggtttgtccgcacggtcctgcccttctctcaggagttccagagggacaagccg
cccaacgcccagccccagtacctgtacgggtcaaaggctctgaacctggcgtacagcagt
atctttggtttctacagacactttgttggtcctcctcacatcaaggccatgtgtcgtctg
ctggggtaccagggcatcgctgtggttatggaggaactgctcaaagtggtcaagagcctg
ctccagggcaccatcatgcagtatgtgaagaccctgatggaggtgatgcctaagatctgc
cgtctccctcgccacgagtacggctcgccgggtatcctggagtttttccaccaccagctg
aaggacatagtagagtacgccgaactgaagaccgtctgcttccagaacctcagggaggtg
ggaaatgcactgctcttctgtctgctcagcgaacagagcctgtctcaggaggaggtgtgt
gacctgctacatgccgcaccattccagaacattcttcccagggtccatgtcaaggagggt
gagcgtcttgatgccaaaatgaaacgtctggagactaaatacacagccctgcatctggtt
cctctgatagaacgcctgggaaccccacagcaaatagccattacccgtgaaggtgacctg
ctgaccaaagagcgtctgtgctgtggcctgtccatgttcgaggtcatcctcacacgtgtc
cgcggtttcctggacgaccccatctggcgcggcccgttgcccagcaacggcgtgatgcac
gtggacgagtgtgtggagtttcaccggctgtggagtgccatgcagtttgtttactgcatc
cctgtaggagcacacgagttcaccgtggagcagtgtttcggagacggtctccactgggct
gggtgtatgatcatctccctactgggtcaacagagacgctttgacatcctggacttcagc
tatcacctgctgaaggtgcagaaacacgatggaaaggatgagatcatcaagagtgtgcct
cttaaaaagatggtggacagaatccacaagttccaggttctcaacgatgagatctacgcc
attctgaacaagtacctgaagtcaggcgacggggaaaatatgcctgtggagcatgtccgg
tgtttccagcctcctatccaccaatccctggccagcaactga
DBGET
integrated database retrieval system
