KEGG   Oncorhynchus kisutch (coho salmon): 109886103
Entry
109886103         CDS       T09179                                 
Name
(RefSeq) LOW QUALITY PROTEIN: bromodomain-containing protein 4
  KO
K11722  bromodomain-containing protein 4
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:oki01001]
    109886103
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oki03021]
    109886103
   03036 Chromosome and associated proteins [BR:oki03036]
    109886103
Protein kinases [BR:oki01001]
 Serine/threonine kinases: Other
  BRD family [OT]
   109886103
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Brd4/P-TEFb complex
     109886103
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    109886103
SSDB
Motif
Pfam: Bromodomain BET BRD4_CDT
Other DBs
NCBI-GeneID: 109886103
NCBI-ProteinID: XP_031667325
LinkDB
Position
Unknown
AA seq 1576 aa
MGDGLEAGSSLDPAPRSLSCNPPPPETWNPSRPKRQTNQLQYLLKVLLKTLWKHHFSWPF
QAPVDAIKLGLPDYYQIIKVPMDMGTIKKRLENSYYWNAQECIQDFNTMFTNCYIYNKPG
DDIVLMAESLEKMFLQKISEMPQEETEIAMVTKGRRAGQREAGLLSKSDSGQDSSPSSTP
HTRGFSSPSPGPQTRCLPVSQGPPTLPLALPPQTQPPRVPPTPPSHAPQLGPPFPISPLD
VLAQGLTSVPHHPPAHPGLHPAAPPIPQSIAPPAKQRKSQKRKADTTTPTANDQLSESSP
VATEPPRPRRESSSRPLKQPKRDPAQPDSQPPGARRGGSWGGALTSHGGSPKRQEQLLFC
GGLIRDMLSKKHIAYAWPFYKPVDAHALGLHDYHHIIKHPMDLGTVKDKLDSRQYRDAQH
FAADVRLMFSNCYKYNPPDHDVVNMARKLQDVFEMRFAKMPDELEETAPFPSPALKPLPI
ISPALHPLPVPALHPLPTPSARQPPAPRPPYSSDDSSSSSESESSEGGLEHERTQRLAEL
QEQLKAVHEQLAALSTPQATKPKRKEREKEKNKDKFKKKIGGEEPPEIPPPAILQPIRKS
KNSKELVTTPKKIKKPSKKEGMKSSRLGAPHQTGSIPLAPSASLEAEDHMSVFVGGAADR
CKPMSYEEKRQLSLDINKLPGDKLGRVVHIIQSREPSLKNTNPDEIEIDFETLKPSTLRE
LETYVWTSLRKNKKKSQPVEKALEVTSVMKMKTGSSSGSSDSSDSDDTGLAPQQQKSSSS
NIYSKRPHQSSRGGVSITAPLDSSSSPQTPLVQSKPPQQQHQHPFAPSPPPSIPTVPVTS
LDSSLTFDPLAHFLAPHLSQQVGESPRNELGAPAAVPPHLNATNTHTSESTQPFLNQQAV
MPSVMLSPALHNALPQQPSRPSNRAAPKPPQPPPSSLSNPSTPPPPQASLHIPQPSLPRP
CVPSPLTPHGILGVSAQPPQALFEDDEEAVPTNSETPPLPLSQVHMYLQSSRPPAHIHPH
TQSPVRVQTRAPSHTQSPGGVQSRAPAHIQSPGRVQSRAPAPAHIQSPGRVQSRAPAHIQ
SPGRVQSRPPAHTQSPGRVQSRPPAHTQSPGGVQSRPPAHTQSPGGVQSQLMSRPPAHTQ
SPGGVQSRPPAHTQSPGRVHSQLMQAMQTQSQAAAAPTQQQQRLATHSHSHPHSHAHSHP
HSHAHAHMQQAGQGMSFPQQQSTMHPAQKGIRQILHPQPSPRILHPQPSPRILHPQPSPR
ILHPQPSPRILHPQPSPRILHPQPSPRIKTEPFNTGPLRESPSPLMIHSPQMPPFPPMRQ
SPSQPKKPNQRVKEEKPLPSPVPPPSPFSPTQRHHKPQDNKHTHRSDVKLLDSSRPGLRL
PDSPAPPPSHQDSKLKQEAKTPITAKKTQDVKLKNMGSWASLAQRSQSTPTSAVRSSSDS
FEQFRRAAREKEREKQLKAQAEQARREQEKLRSRDDEDSVEQQGRVRVQDSRRRQEQLSP
QAPTPPASTPPAVSPQAPPTEQATPHXSAAAQNAMDQQRELARRREQERRRREAMADTID
INFQSDLMAIFEENLF
NT seq 4731 nt   +upstreamnt  +downstreamnt
atgggagacggcctggaggcgggcagcagcctagaccccgccccccgctctctctcctgt
aaccccccgccccccgagacatggaacccctcgaggccgaaacgacagaccaaccagcta
cagtacctgttgaaggtgctgctgaagacgctgtggaaacatcacttctcatggcccttc
caggctcccgtagatgccatcaaactcggcctgcctgattactatcagatcatcaaggtt
cctatggacatgggcaccattaagaagagactggagaacagctactattggaacgcccag
gaatgtatacaggacttcaacaccatgttcaccaactgttacatctacaacaagcctggt
gatgacatagtgttgatggcagagtctctagagaagatgtttcttcagaagatctctgag
atgccccaagaggagactgagatcgccatggttaccaaggggcggagggcggggcagaga
gaagcaggtctcctgtctaagtctgactccggccaggattcatctccctcctccaccccc
cacacccgaggtttctcctccccttcgccgggccctcagactcggtgtctccccgtatcc
caggggccccccaccctccccctcgccctcccccctcagacccagccccctcgcgttccc
cccacccctccctcccacgccccccagctgggaccacccttccccatcagccctctggat
gtcctggcccagggcctcacctccgtaccccaccaccccccagcccacccaggccttcac
cctgctgccccacccatcccccagagcatcgcacccccagctaagcagaggaagagccag
aagaggaaggctgacactaccacacccaccgccaacgaccagctcagcgagtcgtctccc
gtggcgacggagcccccccgaccccgccgtgagagcagcagccgcccgctgaagcagccc
aaacgagaccctgcccagcccgactcccagccacctggggctaggcgggggggttcctgg
ggtggagcgttaactagtcacggcgggagccccaaacgacaggagcagctgctgttctgt
ggcggtcttatcagagacatgttgtcaaagaaacacattgcatacgcgtggcccttctac
aagcctgtcgacgcgcacgccctcggcctccacgactaccaccacatcatcaaacaccct
atggacctcggaaccgtcaaggataagctggacagcaggcagtacagagatgctcagcac
tttgctgctgatgtccggttgatgttctccaactgttacaaatacaaccccccagaccat
gacgtggtcaatatggcacgcaaactacaggacgtgtttgagatgcgctttgccaaaatg
ccagacgagcttgaggagacggcccccttcccctccccagccctcaaacccctccccatc
atctcccctgccctccaccccctccccgtccccgccctccaccccctccccaccccctcg
gccagacagccccctgccccccgacccccctactcctccgatgacagctcctcctcatcg
gaatcagaatcctctgagggaggtttggaacacgagagaacacagagactggctgaacta
caggaacagctcaaagctgttcacgaacagctggccgctctgtccacgccccaggccacg
aagcccaagagaaaagagagggagaaggagaagaataaagacaagttcaagaagaagata
ggaggggaggagccaccggagatcccgccccctgccatcctccagccaatcagaaagagc
aaaaacagcaaggagctggtgaccacgcccaagaagatcaagaaaccgagtaagaaagaa
ggtatgaagagcagccgtctgggcgccccacatcagaccggctccatcccccttgccccc
tcagcctcgctggaggcagaagatcacatgagtgtgtttgtgggcggggcagctgacagg
tgtaagccaatgtcctacgaggagaaacgccagctcagtctggacatcaataaactgccc
ggcgacaagctgggccgtgtcgtccacatcatccaatcacgagagccatcgctcaagaac
accaacccagacgagatagagatcgactttgagacgctgaaaccctcgacactccgagag
ctggagacatatgtctggaccagccttagaaagaataagaagaaatcacagccagtagag
aaggctctggaggtgaccagtgtgatgaagatgaagacaggatcttcatcaggcagcagt
gactcctctgacagcgacgacacagggctggccccccagcagcaaaagtcctcctctagc
aatatatacagtaagagaccccaccagtccagcaggggcggggtcagcatcactgcccct
ctggactcctcctcctccccccagacccccctagttcagtccaaacccccccagcagcag
catcaacacccctttgccccctctcctcctccctccatccccactgtccccgtgacctct
ctggactcctctttgacctttgaccccctagctcacttcctggccccccatctgagccag
caggtgggggagtccccccgtaatgaactgggggcccctgccgccgtacccccccacctc
aacgctaccaacacacacacctctgagagcacacagcccttcctcaaccagcaggccgtc
atgccctccgtcatgctctccccagcactccacaacgctctcccccagcagccgtcccgc
cccagcaaccgagcggcccctaaaccccctcagcctcccccctcctccctctccaacccc
tccactcctcctcccccccaggcctccctccacattccccaaccctcgctccctcgccct
tgtgtcccctctcccctcaccccccacggaatcctgggggtgtcggcccaaccccctcaa
gccctatttgaggacgacgaggaggccgtgcccactaactctgaaacccctcccctcccg
ctcagccaggtgcacatgtacctgcagtcgtctcggcccccggcacacatacacccccac
acacagtctcctgtgcgggtccagacccgggccccgtcccacacacagtctcctgggggg
gtccagtcccgggccccggcccacatacagtctcctgggcgggtccagtcccgggccccg
gccccggcccacatacagtctcctgggcgggtccagtcccgggccccagcccacatacag
tctcctgggcgggtccagtcccggcctccggcccacacacagtctcctgggcgggtccag
tcccggcccccggcccacacacagtctccggggggggtccagtcccggcccccggcccac
acacagtctcctgggggggtccagtctcagctcatgtcccggcccccggcccacacacag
tctcctgggggggtccagtcccggcctccagcccacacacagtctcctgggcgggtccat
tctcagctcatgcaggccatgcagactcagtcacaggcagcggccgctccaacccagcaa
cagcagaggctcgcaacacattctcactcacaccctcactcacacgctcactcacaccct
cactcacacgctcacgcacacatgcagcaggcgggacaggggatgtcgttcccccagcaa
cagagcaccatgcacccggcacagaaagggatcagacagatactacatccacaaccatca
ccacggatactacatccacaaccatcaccacggatactacatccacaaccatcaccacgg
atactacatccacaaccatcaccacggatactacatccacaaccatcaccacggatacta
catccacaaccatcaccacggatcaaaactgagcctttcaacacaggtcctctgagggag
agcccctcccctctgatgatacattctccccagatgcctccgttcccaccaatgagacag
tccccttcccagcccaagaaacctaaccaaagggtgaaagaggagaagccgctcccctcc
ccggtgccgcccccctcccctttcagccccacccagcgacaccacaaaccacaagacaac
aaacacacacacagatcagatgtgaagctattggacagttctcgtccggggctccgcctc
ccggactccccggcccctcccccttcccatcaggacagcaaactgaagcaggaggctaaa
acacccatcaccgccaagaagacacaggatgtcaagttaaagaacatgggttcctgggcc
agcttggcccagcgttcgcagtccacccccacctccgctgtccgctcctctagcgacagc
ttcgaacagttccgtcgcgccgcccgagagaaggagagagagaaacagcttaaagcacag
gccgagcaggccaggagagagcaggagaaactacgtagccgtgacgacgaggactctgtg
gaacagcaggggagggtgcgtgtccaggactctcgccgtcgccaggagcaactttcgcct
caagcccccacgccccctgcctcaacccctcccgccgtctccccacaggcccctcccact
gaacaggccacaccccacncctcggccgcagcacagaacgccatggaccagcagagggag
ctggcaagacgccgcgagcaagagaggaggaggagagaggcgatggcggacaccattgac
atcaacttccagagcgacctgatggccatctttgaagagaacctgttctga

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