Oncorhynchus kisutch (coho salmon): 109886246
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Entry
109886246 CDS
T09179
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
109886246
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109886246
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109886246
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109886246
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
109886246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
7tm_3
MAP17
DUF6377
EphA2_TM
Big_9
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
109886246
NCBI-ProteinID:
XP_020333557
Ensembl:
ENSOKIG00005041131
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MDLTDFYLLAALVACFWMDPSIAQELIYPIREELQENVLIGNIPKDLNVSHTNAATGASA
NLVYRLVSKAGDNPLLRVQSSTGEIFTTSNRIDRERLCPGPSFEENECSFEIEVVILPND
YFRLIKIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYQL
VNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGMPQKSSTAILQVT
VTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADVGANAEIKYMFGTQVSPATKR
LFALNGTTGLITVQRPLDREETAIHKLSVLASDGSSSPARATVTINVTDVNDNPPNIDLR
YIISPINGTVFLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDFEGTKEYNFKIIASDSGKPSLNQTALVRVRLEDENDNSPIFSHPVIELAVMEN
NKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFT
VTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDSDA
GENAAVTLSILSDNENFILDPYSGVIKSNVSFDREQQSSYTFDVRAVDSGRPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
TKGLFRIDPVTGNITLEEKPAISDIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNA
TFIYDLIRRTMETPLDRNIGESSETYQSGDYLTIMIAIVAGAMVVIVVIFVTVLVRCRHT
SRFKAAQRKKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEENKPDDPAHEPIN
GNISLPAELEEPGHFDWNAAPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKHHM
IQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGSVHPSRQVKDNFYWSIS
TAYNCPVQQC
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggatctaacagacttttacttgttggctgctctcgttgcttgtttctggatggaccct
tctatagcccaggaactgatctatcctattagagaggaactgcaggaaaacgttctcatt
ggaaacataccaaaggacctgaacgtctcccatacaaacgctgctaccggagctagcgct
aacctggtctacaggctggtgtctaaagccggcgacaaccctctgctcagagtgcagagc
agcacgggagagatatttacgacctccaatcgcatcgacagggagaggctctgtcccggc
ccctcgttcgaggagaacgaatgctccttcgagatcgaggtggtgattttacccaacgac
tacttcagattgataaagattaagatcgtagtcaaggacaccaacgataacgctcccatg
ttcccgtctcccgtcatcaacatctccattccggagaatacgctgatcaacagtcgtttc
gccatcccctccgccaccgaccccgacaccggccccaacagtgtacacaagtaccagctg
gtgaacgggcaaagcgccttcgggttggacatcgtagagacgcccgagggggagaagtgg
ccgcagctcatcgttcagcagaacctggacagggaacagaaggatacgtacgtcatgaag
atcaaggtggaggacggcggcatgccacagaaatccagcaccgccatcctccaagtcacc
gtcacagacgttaatgataacaagccggtgttcagggagaaccagatcgaggtccacata
ccggagaactcgcctatagggacgtccgtagtccagctacaggctacggacgcagacgtc
ggggcgaatgccgaaatcaaatacatgttcgggacacaggtctccccagctaccaagaga
ctatttgctttaaacggtaccacgggtcttataaccgtacagcgacccctcgatagagag
gagaccgccatacacaagttatccgtgttagcgagcgacggcagctccagcccagccaga
gctaccgtaactataaacgtgacggacgtgaacgacaatccgccgaacatcgatctgaga
tatatcatcagtccaataaacggcaccgtgttcctctcggagaaagacccaatcaacacc
aagatagctttgatcaccgtgtcggacaaggacacggacgtcaacggcaaggtcatctgt
ttcatcgagaaggacgtcccctttcacctcaaagcggtgtacgacaaccagtatttacta
gagacgtcggcgctgctcgactttgaggggaccaaagagtacaacttcaaaatcatagcc
tccgactctggcaagccgagcttaaaccagacagcgttggtaagggtgaggctggaggat
gaaaatgacaactcgccgatcttcagccatcctgtcatcgagctggccgtcatggagaac
aacaaacgcgatctcttcctcacgactctcagcgccaccgacgaggacagtgggaaaaat
gcggagattgtctaccaactgggccctaacgcctcgttctttgacctggaccgtaaaacc
ggtgtcctcacggcctcccgggttttcgatcgtgaggaccaggatcggttcctcttcacg
gtaacggcccgagacaacgggacgcctccactccagagccaggcggcagtcatcgtgaca
gtgctcgatgaaaacgacaacagccccaagttcacccacaaccacttccagttctttgtg
tcagagaacctgcccaagtacagcacggtgggggtgataaccgtcacagactcagacgcc
ggggaaaatgccgccgtcacgctttcgatactcagcgacaacgagaactttatcctagac
ccgtactctggagtaataaagtccaacgtgtcctttgaccgggagcagcagagctcctac
accttcgacgtccgggcggtggatagcgggcggcccccgtgttcctcggccgccaaggtg
acaatcaatgtcatcgacgtaaacgacaacacccccatcgtcatctaccccccttccaac
acctccttcaaactggtccccctctcgtccatccctggatcggtggtggccgaggtcttt
gctgtggacggtgacacagggatgaacgcagagctcaagtacaccatcgttagcggcaac
accaaaggtctgttccggatcgaccctgtgacaggaaacatcaccctggaggagaagcct
gctatctccgacatcggcctccatcggctggtcgtgaacattagcgacctgggctaccct
aagtccctgcacaccctggtgctggtgttcctctacgtgaacgacacggtcggcaacgcc
acgtttatctacgacctcattcgccgcaccatggagacgcccctggacaggaacatcggg
gagagcagtgagacttaccagagcggagattatctcaccatcatgatcgccatcgtagcc
ggggcgatggtggtgattgtggtgatcttcgtgacagtcctggtgcgctgtcgtcacacc
tcgcggttcaaggcggcccagaggaagaagcagggcgctgagtggatgtctcccaaccag
gagaacaaacagaacaagaagaagaagcgcaagaaaaggaagtcgcctaaaagctccctc
ctgaactttgtcaccatcgaggagaacaagccggacgacccggctcacgagcccatcaac
ggcaacatcagcctgcctgccgagctggaggagccgggacactttgactggaacgctgct
cctacgaccaccttcaagccctccagtccagacctggcacggcactacaagtccgcttct
ccgcagtccgcgttccacctcaaagcggacacgccggtctccgtgaagaaacaccacatg
attcaggagctccctctggacaacaccttcgtagggggctgtgatactctctccaagaga
tcctccactagttcagaccacttcagtgcctcggagtgcagttcccagggaggattcaag
actaagggatccgtacacccatccagacaggtaaaagataacttttactggtctataagt
actgcgtataactgcccggtccaacagtgctga
DBGET
integrated database retrieval system