Oncorhynchus kisutch (coho salmon): 109886334
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Entry
109886334 CDS
T09179
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109886334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109886334
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109886334
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109886334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
109886334
NCBI-ProteinID:
XP_031671238
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MKRGRRCFGGNRSRKRTRPTPQQLQEMPLEVEAGSEGKGCIPSILDVRVHSHLGSARRRE
INAVTNSMFSATRKRFVEGVESDYPDDTVYYGQTSMFPHPSDKDMLASPSPSSSGQLSQL
GASLYGPQSALGFPMRGMSNTAQLNRSLPQGNQLPSHVTPASGVAPTMSIHTPPSPSRGI
LPMNTRNMMNTPQQVGRQEVMVGGMPSGGRTNSLGSSGLGSPNRASPSIICMPKQQQSRQ
PFTINSMSGFGMNRNPSFGMNNSLPSNIFNGTDGSENVTGLDLSDFPALADRSRREGGGN
PTPLLNPLAGRAPYVGMVTKPSNEQSQDFSIHNEDFPALPGPNYKDPTSNNDDSKTNLNS
SGKTSSSTDGPKFPGDKSSTAQNNNQLKKGIQVLPDGRVTNIPGGMVTDQFGMIGLLTFI
RAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTN
IHIRDKVCTSETE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagggagacgatgcttcggtggcaacagaagcagaaagcgcacccgcccaaca
ccgcaacagctacaggagatgcctttggaggttgaggcagggtcagagggtaaaggctgt
atacccagcatcctcgatgttagagtacacagccatcttggatctgcgaggagaagagaa
attaatgcggtgactaacagcatgtttagtgctaccagaaagaggtttgtagaaggggtg
gagagtgactaccccgatgacacagtgtattatggccagacatccatgttccctcatcca
tcagacaaagacatgctggcatctccatccccatcgtcgtcaggtcaattgtcgcagctt
ggtgccagtttatacgggccacaaagtgccctagggttccctatgaggggcatgagcaac
acggctcagttgaatcgtagcttaccacagggcaaccagctaccgagccacgttacccct
gcctctggagtcgcccccacaatgtccatccatactcctccatcgccaagcaggggcatc
ctgcccatgaacacgcggaacatgatgaacacccctcagcaggtggggcgccaggaggtc
atggtggggggcatgcctagtgggggcaggaccaacagcctgggcagctcgggcctgggc
agccctaaccgtgcctctcccagcatcatctgcatgcccaagcaacagcagtcacggcaa
cctttcaccatcaacagtatgtcggggtttggaatgaaccggaatccatcgttcgggatg
aacaactcgttacccagcaacatcttcaacggaacagatggaagtgaaaacgtgacaggt
ctggacttgtcagacttcccagcgttagcagaccggagtcggagggaaggaggtgggaac
cctactcctctcctcaacccactggctgggagggctccttatgttggaatggtcaccaaa
ccctcaaacgaacagtcccaagacttctccatccataacgaggacttccctgcactgcct
ggtcccaactacaaggaccccacgtcgaacaacgacgacagcaaaacgaatctaaactct
tcaggtaagacttccagcagcacagatgggcccaagttccccggggacaagagctcaaca
gcccagaacaacaaccagttgaagaaaggcatacaggtgttaccggacggtcgtgtgacg
aacattcccgggggcatggtaacagaccagtttgggatgattggcttgttaacgttcatc
agggcagcggagacggaccctggcatggtgcacctggcactgggcagtgacctgacaaca
ctaggactcaacctcaactcgccagaaaatctgtaccccaagtttgcatctccctgggcg
tcagcaccgtgtcgaccccaggacatcgacttccatgttccatctgagtatttaaccaac
attcacataagggacaaggtatgtacctcagagacagaataa
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