Oncorhynchus kisutch (coho salmon): 109886397
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Entry
109886397 CDS
T09179
Name
(RefSeq) nuclear pore complex protein Nup107-like isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109886397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109886397
03036 Chromosome and associated proteins [BR:
oki03036
]
109886397
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109886397
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109886397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
NACHT
WH_MCM3_C
Motif
Other DBs
NCBI-GeneID:
109886397
NCBI-ProteinID:
XP_031671882
Ensembl:
ENSOKIG00005021220
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MDWDQNELLSPIVRDAEVTRAARRKSSVQKKAQFNFLSPRDDNQGSTTTPARSLPCHTPG
SLFKQSCKSALVKQSFTPKSAARNPDVSAILATGRRTPRFIHTPRPPLGSMSMNLDDSDW
TNSLYPSPLSGLGLGDTSFTDDINMSSVMLEEEDPGEAASVSLFPEFLQSYLRHSSTAVF
DLLGEYEAICQDKVGMLQRLVSRAAPGQQKSSKTAGMRWLLQQEMVTWRLITSLYRDRIQ
SELEDDIMMDVAAPGVSEKVVMEQLFQRDAVVRQSQLVVDWLESIAKDEIGDFSDNIEYY
AKSVYWENTLHALKLRRNTSSTGFNVPLVTELDPDAPIRQRRPLADLDREDDARLLKYLF
TLLRAGMTDEAQRLCKRCGQAWRAATLEGWKLYHDPNINGGGAELLPVEGNPQRCVWKVC
CWRMADSEHFSRYERAIYAVLSGNLKRLLPVCESWEDSVWAYFRVLVDSLVEQEVRSSGM
GSEELEELPREYLEANWTLEKVFEELLATESKKVLEETKEHYHIIQKLVILGDLDGLLEE
FSNWLTRSPALPSHLLRFMTHLVLFYRSLGMQLKEEVSVDVLKAYISLLMREKHVDLIAF
YVSHLPPDLATAQYALFLEEVTEAEQRQRCLELAREAGLDVAAVTKMVVENIRERDTEEF
AHHDLTPALDTGTSAEDQRKIDVIDWLVFDPAQRAEALKQSNAIMRKFLACKKHHAAKVV
FGKVPEDSMREIYRQWEELGLDTPLPAEDENAIREHLCVRAYLEAHEAFNEWFHHMNSPP
QKPSLPAQAKFTEKVAYEMKENEYQLEHDSWTGRLEALTEDVKERIYNVLLFVDGGWMVD
VREDTEEDPERGHQMVLLRRLCLPMMSFLLQTVLQRTQRHQESLRLADIIASDQHRLYEV
FSKDELRKFLQKMRESSLLLLDKGLDPLGYEIQP
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggactgggaccagaatgagttgctgtcgcctattgtacgagatgccgaagtgaccaga
gcagcacgccgaaagagttcagttcagaagaaggctcaattcaacttcctttctcctcgt
gatgacaaccaaggtagtaccaccacacctgcccgttccctgccctgccacacacctgga
tccctcttcaaacagtcctgtaagtctgccctcgtcaaacagtccttcaccccgaagagt
gctgctaggaacccagatgtgtcggccatcttggcgacagggcgcaggactcctcgtttc
atccatacgccacgacctcccctgggcagtatgagcatgaacctggatgacagtgactgg
accaacagcctgtacccgtctcctctgtccggcctgggactgggggacaccagctttact
gacgacatcaacatgtcctctgtgatgctggaggaggaggatcctggagaggctgcatca
gtcagtctgttcccagagttcctccagtcctatctcagacactcctccactgctgtcttt
gacctgctgggggagtatgaagccatctgtcaagacaaggtgggcatgctccagaggctg
gtatcgagggcagctccagggcaacagaagtcctctaagactgctggtatgagatggctt
ttacagcaggagatggtcacctggcgcctcatcacttctctatacagagacaggatccag
tcagagctggaggatgacatcatgatggatgtggctgctcccggtgttagtgagaaggtg
gtgatggaacaacttttccagagagatgctgtagtacgccagagtcagttggttgtggat
tggttagagagtatcgccaaagatgaaatcggggacttctccgacaacattgaatactac
gccaagtctgtctactgggagaatacccttcatgctctgaaactgagaagaaacacatcc
agcacaggcttcaatgttcccctggttactgagctggaccctgacgcccccatcagacag
agacgtcccctggcagacctggacagagaggatgatgccagactgctgaagtacctcttc
accctcctcagagcgggcatgactgacgaggcccagaggctgtgtaagcgctgtggccag
gcatggagagctgctactctggagggatggaagctgtaccacgaccccaacatcaacgga
ggcggtgcagagctgctaccggtggaggggaaccctcagcgctgtgtgtggaaggtctgc
tgctggaggatggctgatagtgaacacttcagcagatatgagagagccatctacgctgtt
ctgagtgggaacctcaaacggctgctcccagtgtgtgagtcgtgggaggacagtgtgtgg
gcctacttcagggtcctggtagactctctggtggaacaggaggtccggtcctcagggatg
ggcagcgaggagctggaggagctgccacgagagtacctggaggccaactggacactagag
aaggtgtttgaggagctgctggcaacagagtcaaagaaagtcctggaagagacgaaagaa
cactaccacattatccagaagttagttatcctgggtgacctggacggtctgttggaggag
ttcagtaactggttgaccaggagtcctgctctgccctctcacctgctgcgcttcatgaca
cacctggtgttgttctaccgtagtctgggcatgcagctcaaggaggaggtatcagtggat
gtcctgaaggcctacatctctctgttgatgagggagaagcacgttgatctgatagccttc
tatgtcagtcacctgccgccagacctggccaccgcccagtacgctctcttcctggaagag
gtcaccgaggctgagcagagacaacgctgtctggagctggccagggaggcaggtctggac
gtggcagcggtcactaagatggtggtggagaacatcagagagagagacactgaggagttt
gctcatcatgacctcacccctgcactggacactggcacctcagcggaggaccagaggaag
atcgatgtgattgattggctggtgtttgaccccgcccagagagctgaggcactcaaacag
agcaacgccatcatgaggaagttcctggcctgtaagaaacaccatgcagctaaggtggtg
ttcggtaaggtccccgaggactccatgagggagatctaccgccagtgggaggagctaggc
ctggacacgccccttcccgcggaggatgagaacgccatcagggaacacctgtgcgtccgc
gcttacctggaagctcatgaggcgtttaatgagtggttccatcacatgaactccccccct
cagaagcccagcctgccggctcaggccaagttcactgagaaggtggcctacgagatgaag
gagaacgagtaccagctggaacatgacagctggaccggccgtctggaggctctgactgaa
gacgtgaaggagaggatctacaacgtcctgctgtttgtggacgggggctggatggtcgac
gtcagagaggacacggaggaggacccagagagaggccaccagatggtgctgcttcgtaga
ctctgtctgcccatgatgtccttcctgttgcagacagtactgcagagaacacaacgtcac
caggagagtctcagactggctgatatcatcgcctcagaccaacaccgtctctacgaggtg
ttctccaaggatgagctgaggaagttccttcagaagatgagggagtcgtctcttctctta
ttggataagggtctagacccgctggggtacgagatccaaccataa
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