Oncorhynchus kisutch (coho salmon): 109886477
Help
Entry
109886477 CDS
T09179
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109886477
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109886477
03041 Spliceosome [BR:
oki03041
]
109886477
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109886477
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109886477
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109886477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
PWI
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
109886477
NCBI-ProteinID:
XP_031671763
Ensembl:
ENSOKIG00005043306
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MMSCVYQLPKPLGVTREKLPRLVNMHFKSTVESDFPFKYHSRPVTGVGPVSERLLDRIQE
LTSCDADPSALAKYVVALVKKDKSETELKALCVDQLDVFLQKETQTFVDRLFEAVNSKSY
LPQQDHQPGSAGKAEGHLTRTDKDDQRKDEPSREEDRDKKFSRRVNYSPPSSSRYSRDSR
RGDDRKRDDRTRKRNDYDRIPPRRDSYRDRYNRRRGRSYSRSRSRSKDRARDRERDRDRS
SRSHSRTHSKSRERDAGRSKYEPDRGDRGTEVGAGEGLLPIPTATATFPVPTLSSTITVI
APQGNHSNSIASVTDSWSDFHPDQSLDRPLPPQRKRCRDYDEKGFCMRGDICPFDHGIDP
VVVEDVNLPNMFQAPPPIPGVAQPPPGLPPPPGPPPLMTPPPVNLRPPVPLTGSLPPGLP
PSLPPGPPHQASGMGAPPGPPHQASGMGAPPGPPHQASGMDAPPSSIANSVPTIVTTGTR
PSIPLPPAPLFPPGQYDSDMYNPEDPSLTNTSRPVYRHRVNAQRPNLIGLTMAEDLPHRD
RDQMPNRMRIVLDSASRKRSAVSHHGAMQKPWADKPNFNQQNLQGGFHNKNPQNQNQKAP
FGSNTKLSVLQIPQGLNNISKLNQHFSKFGTIVNLQVTYGNDPEGALIQFDSHEEAKRAL
QSPEAVLNNRFIRVLWHCEDEMGQQGMGQQGQQHHQPLMVQQPATSLKQSVKDRLGPLPA
DSSEPNQDSRVASQNDFKSNLSMKERLGFASKPGSTPSGPAGKVFSTSTGLTKTVYNMAA
LKAAQKTALFAGVAATEEAMKNKQEALRLQQEMRKKKQEILEKHIETQKLLICKLEKNKT
MKAGDKAVIMTTLGTLTKSITKLQQEIKGLSNPSGVRGAPKSKAQAQKELLDTELDLYKK
TQSGEDTVQLKIRYTQLQLEAAKRGILAPGRGRGAHARGRGGLRGRGRGRGGRGRGLPVH
STVDHRPRALEISGFTETDLQDLLPHFAQFGELEDCQIDEPSCLAVITYRSRPEAEQAAL
HSVRLNGSDLRLSWHKPAVSLTSQEPDEQETDHDEFQEESLIDDALLQDDDEEDDDNEPR
PWRR
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatgtgtgtatcagttaccaaaacccctgggtgtcaccagagagaagttgccc
aggcttgtcaacatgcattttaaatcgacagttgagtctgattttccgtttaaatatcac
tctcgtcctgttactggtgttgggccagtaagtgaaagattgctggatcgaatccaagag
ttgacaagttgtgatgcagatccatctgccctcgctaaatacgtcgttgccttggtgaag
aaagacaaaagtgagacggaactcaaagccctgtgtgtcgaccagttggacgtatttcta
cagaaagagacgcagacctttgtcgatagactctttgaagccgtcaactccaaaagctac
ctacctcagcaggaccatcagccaggttccgctggcaaagcggagggacacctgaccagg
acggacaaagacgaccagaggaaagatgagccaagtcgcgaggaggaccgggacaagaag
ttctccaggagagtgaactacagccccccgtccagctcccgctacagtagagacagcaga
cgaggggatgaccgtaaaagggacgaccgtaccaggaaacggaacgattacgaccgcatc
cccccgagacgggactcgtaccgggaccgttacaaccggaggaggggccgtagctacagc
cgcagtaggagcaggagcaaggaccgggccagggaccgggagagagaccgagaccgcagt
agcaggagtcacagcaggacccactccaagagcagagagcgggatgctgggaggtcaaag
tacgagcccgatcgaggagaccgggggacggaggttggagctggtgaaggcctcctgccg
atccccacggcaaccgccacgttccccgtgccgaccctcagcagcaccatcacggtgatc
gcccctcaaggtaaccacagcaacagcatcgcctcggtgacggacagctggtcggacttc
cacccggatcagtcactggaccggccccttccgccacagaggaaacgttgccgtgactac
gacgagaaaggcttctgtatgcgcggggacatttgcccattcgaccacggtatcgatcca
gtggtggtggaggacgttaatctacctaacatgttccaagcccctccccctatcccgggg
gtcgcccagccccctcccggcctaccgcccccgccaggacctccccctctcatgacccca
cctcccgtcaacctccgcccccctgtgcccctgacaggcagcctgccgcccggcctgccg
cccagcctgccgccaggtccccctcaccaggcatcagggatgggtgcccccccaggtccc
cctcaccaggcatcagggatgggtgcccccccaggtccccctcaccaggcatcagggatg
gatgcccctcctagctccatcgccaactctgttcccactattgtaaccacagggacacga
ccctccatccccctgcccccggctcctctcttcccaccaggccagtatgactctgacatg
tataaccctgaggatcccagcctcaccaacacctccagaccagtgtatcgccacagagtc
aacgcccagagacccaacctcataggactgactatggctgaggacctgcctcacagagac
cgagatcagatgcccaacagaatgaggatcgttctggactcggcctccaggaagagatct
gctgtctcacaccacggagcaatgcagaaaccctgggccgacaaacctaacttcaaccag
cagaacctccagggtgggttccacaacaagaaccctcagaaccagaaccagaaggctccg
tttgggtcaaacaccaagctgtcggtcctgcagatcccccagggactcaacaacatctcc
aagcttaaccaacacttcagcaagttcgggactatcgtcaacctgcaggtaacctatggt
aatgacccggagggggccctgatccagttcgacagtcacgaggaggctaagcgtgccctg
cagagtcctgaggctgttctcaacaaccgcttcattagagtcctatggcactgtgaggac
gagatgggacagcagggaatgggacagcagggacagcaacaccatcagccactcatggtg
cagcagccagccactagtctgaaacagtccgtcaaagatcgtctgggccctctgcctgcc
gacagctcagagcccaaccaagactctcgtgttgcctcacagaatgactttaaatccaac
ctatcaatgaaggagaggctgggcttcgcctctaaaccaggaagtacccctagtggaccg
gcaggaaaggtgttctccacctctacggggctgactaagacagtgtacaacatggctgct
ctgaaagcagctcagaagacggctctgttcgctggggtcgctgctacagaggaggctatg
aagaataaacaggaagccctgcggctccaacaggaaatgaggaagaagaagcaggaaatc
ctggagaaacacatcgagactcagaagctgttgatctgtaaactggagaagaacaagacg
atgaaggcgggagacaaggcggtgatcatgacaacgttgggaacgctgaccaagagtatt
accaaactacagcaagagattaaagggctctctaacccttcaggagtacggggggcgccg
aagagcaaggctcaggctcagaaggagttgctggacacagaactggacctgtataagaag
acccagtctggagaagataccgttcagctgaagatcagatatacacaactacagttagag
gcagctaagagggggatcctggctccagggcggggcagaggggcccatgctcgaggccgt
gggggcctgagaggcagggggaggggaaggggtggccgggggaggggtctccctgtccac
tctacagtagatcacagacccagagccctggagatctctggctttactgagactgacctc
caggatctactgccacactttgctcaatttggagagttggaggactgtcagatagacgag
ccatcctgtctggctgttatcacctacaggagcagaccagaggctgaacaggctgcgcta
cacagtgtccgtctgaacggcagtgatctgcgtctgtcctggcacaagcctgccgtctcc
ctgacctcccaggagcctgatgagcaggagacggatcatgacgagttccaggaagagtcg
ctgattgatgatgcgttgctccaggacgacgacgaggaggatgacgacaacgaaccccgc
ccctggcgcagatga
DBGET
integrated database retrieval system
