Oncorhynchus kisutch (coho salmon): 109886492
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Entry
109886492 CDS
T09179
Symbol
trpm1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109886492 (trpm1)
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109886492 (trpm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
LSDAT_prok
Ion_trans
YVC1_C
Cpta_toxin
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
109886492
NCBI-ProteinID:
XP_031668615
Ensembl:
ENSOKIG00005020675
LinkDB
All DBs
Position
Unknown
AA seq
1576 aa
AA seq
DB search
MERWSVLKHTQATPTDTYGIMEFQGGGHVNKAMYIRVAYDSKPDNMLHLMVKDWQLELPT
LLISVHGGLQNFDLQPKLKQVFGKGLIQAAVTTGAWILTGGVSTGVIRHVGDALKDHSSK
SRGKVCAIGIAPWGIVENKEDLIGRDVTRPYQAMSNPMSKLSVLNNSHSHFILADNGTHG
KYGAEVRLRRQLEKHISLQKINTRLGQGVPLVCLILEGGPNVISIVLESLREDPPVPVVV
CDGSGRASDIISFAHRYSEDDGLVSDSVKDQLLVTIQKTFNYNRGQAQQIFLMVLECMKK
RSLITVFRMGSEGQQDIEMSILTALLKGTNASAPDQLSLALAWNRVDIARSQIFVYGHHW
PMSGNAANTTASQEKTKSPVPARGGGGGAGKGKARVKKGKGGKAKPEPPEETDPRKLELR
NWVNSLEQAMMDALVLDRVDFVKLLIENGVNIHHFLTIPRLEELYNTRLGPTNTLHFVVR
DVKKGNLPPDYQITLIDIGLVLEFLMGGAYRCNYTRKQFRTLYNNLYGLKRPKALKMLGL
EDDEPGGKGKRKKKKKKEEEIDIDVDDPEVSRFQYPFHELMVWAVLMKRQKMALFLWKRG
EEAMAKALVACKLYKAMAHESSQSELVDDIFQDLENNSKEFGQLAYELLDQSYKHDEQVA
MKLLTYQLKNWSDSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGCLRMGKRNGFKVIFGI
IFPPSILLMDFRLGEEVTCQAPAENEEEAKDKDDDNKSSKEVNADGVSRKGDEEESAVKK
RRVPIGKKIYEFYNTPFTKFWFNTISYLAYLCLYNYIILVKMERWPSLQEWIVISYIITL
GMEKVRQILMSEPGKLKQKINVWAEEYWNITDAAAIFTFLLGLMLRLQSEPLLGIGRVIY
CVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVLMSFGVARQAILHPD
EIPTWRLARNIFYMPYWMIYGEVFADSIDLYAMEINPPCGDNMYDEDGKKLPPCIPGAWL
TPAIMACYLLVANILLVNLLIAVFNNTFLEVKSVSNQIWKFQRYQLIMKFHDRPLLPPPL
IIFSHIHIVLKHVCRRCKRRTEGEQDDRDNKGLQLLLNAEELKALYDFEEQCVEEYFREK
EDEEQSSSNERIRVTSERVENMSMRLEEVNEREHSMKASLQTVDLRLGQLEEFSGRMMNA
LEKLAGVDHNDLVRTQSGVSSVCDTSSLLRHSSINSSDGYSLYRYHLEMGDDTRSEAGDI
RSPERKGSQRKVVERKRSMRETTTGITASVKEYGATLDVVGPRERNHSSSSVSVCEGAKE
TPTQRPEVPTEPFPLPCSPAASMDAALEKAGVTTEKIKLEATISYPLERVRSLQYQSPET
HSDCLTSRPRSRSTMVYNPADGGDEGATWATDVNNLTGDQETVTSRSPTIGHWAARFEYK
VHPCPFGHMPKVSMEKLVPTTTDTKDEAEAKETTTDSEPQEPGKSQSESNQDGGEEKQEA
EAKDTGGGLLLVAEDRMYPSLRSKSLNTNPRKVKARGDWAQRTKSDSSVKDLTAMLGGTG
ETETEVETEVETDRQY
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggaacgctggtccgtgcttaaacacacacaggccacgcccacagacacatacggcatc
atggagtttcagggaggaggacatgtcaacaaggccatgtacatccgtgtggcgtacgat
tccaaaccagacaacatgctccacctgatggtgaaagactggcagctggagctccccacc
ctgctcatctccgtccacgggggactgcagaactttgacttgcagcccaaactaaaacag
gtgtttggaaagggtctgatccaggctgcggtcaccaccggagcctggatactcactggt
ggagtcagcactggggtgatccggcatgtaggagatgcgttgaaggaccactcctcaaag
tccagggggaaagtatgtgccatcgggatcgctccatggggcatcgtggagaacaaggag
gatctgataggaagagacgtgacacgtccgtaccaggccatgtccaaccccatgtccaag
ctgtctgtcctcaacaacagccactcccacttcatcctagcagataacgggacccacgga
aagtacggcgcagaggtccgtcttcgccgtcagctggagaaacacatctccctgcagaag
atcaacacacgtctgggtcagggggtgcctctggtctgtctgatcctggaggggggtccc
aacgtcatctccatagtcctggagagcctgagggaggacccccctgtcccggtggtggtc
tgtgacggcagtggacgggcctctgacatcatctccttcgcacacagatactctgaggac
gacggcttggtcagtgatagcgtgaaggaccagctcctggtcaccatccagaagacgttt
aactacaaccgtggtcaggcccagcagatcttcctcatggtgttggaatgtatgaagaaa
cgatctctgatcactgtgtttcgtatgggctcagagggccagcaggatatcgagatgtcc
atactgacagccttgctcaaaggcaccaatgcctctgcccctgaccagctgagtctagcc
ctggcctggaacagagtggacatcgctaggagccagatcttcgtctacggtcaccactgg
cccatgagtggcaacgcggccaacaccacggcatcccaggagaagaccaagagcccggtc
ccagcccgcggtggaggtggtggggcagggaagggcaaggccagggtcaagaagggcaaa
ggaggcaaggccaaacctgaacctccggaagagacggaccccaggaagctggagctacgc
aactgggtgaactctctggagcaggccatgatggatgccctggtgctggacagggtggac
ttcgtcaagctgctgatagaaaacggtgtcaacatccaccacttcctcaccatcccccgt
ctggaggaactctacaacacgaggctgggcccaacgaatacactgcactttgtagttaga
gacgttaaaaagggaaatcttccaccggattaccagatcaccttgatcgatatcggattg
gtcctggagttcctgatgggcggggcttatcgctgtaactacaccaggaaacagttccgc
accctctacaacaacctttacggtttaaaaagaccgaaagctttaaaaatgttaggactg
gaggacgacgagcctggaggaaaaggcaagaggaagaagaagaagaagaaagaggaagag
atcgacatcgatgtggacgacccggaggtcagccgcttccagtacccgttccatgagctg
atggtgtgggccgttctcatgaagcgtcagaagatggctctgttcctgtggaagaggggg
gaagaggccatggccaaagctctggtggcctgtaagctgtacaaggccatggcccacgag
tcgtctcagagtgaactggtggacgacatcttccaggacctggaaaacaattccaaagag
tttggccagctggcctacgagctcctagaccagtcctataagcacgatgagcaggtggcc
atgaaactactgacctatcagctaaagaactggagcgactctacctgcctgaaactggct
gtagccgccaagcacagagacttcatcgcccacacctgcagtcagatgctgctcactgat
atgtggatgggatgtctgagaatgggcaagaggaacgggttcaaggtgatatttggcatc
attttcccaccttcgattctcctcatggattttcgactcggggaggaagtgacatgtcaa
gccccagcggagaacgaagaagaagcgaaggacaaagacgatgacaataaatccagcaag
gaagtgaatgctgatggggtgtccagaaagggggatgaagaagaaagtgccgtaaaaaag
agaagagttccaatcggaaagaagatctatgaattctacaacactcctttcaccaaattc
tggttcaacacgatctcctaccttgcctacctgtgtttgtacaactacatcatcctggtc
aagatggaacgctggccgtccctgcaggagtggatcgtcatctcttacatcatcactctg
ggaatggagaaagtcagacagatcctgatgtcagagccggggaagctgaagcagaagatc
aacgtttgggccgaagagtactggaacatcacagacgcggcggccatctttaccttcctc
ctgggcctgatgctgaggctgcagagcgagcccctgttgggcatcggacgggtcatctac
tgcgtggacattatcttctggtacatcagggtgctcgacatcttcggggtcaacaagtac
ctgggcccctacgtcatgatgatcgggaaaatgatgattgacatgttgtacttcgtggtg
atcatgctggtggtgttgatgagtttcggcgtggcgcggcaggccatcctgcaccctgat
gagatcccaacatggcgtctggccaggaacatcttctacatgccttactggatgatctat
ggggaagtgttcgctgactccatagacctctatgcaatggaaatcaatccaccatgtggt
gataacatgtacgatgaggatgggaagaagctacctccttgtatccccggagcctggctc
actccagccatcatggcctgctacctgctggtggccaacatcctcctggtcaacttactc
atcgctgtcttcaacaacaccttcttagaggtcaagtccgtctccaaccagatctggaag
ttccagcgttaccagctgatcatgaagttccacgaccggcccctcctccctccgcccctc
atcatcttcagccacatccatatcgttctgaaacacgtctgtcgtcgctgcaagaggaga
acagagggagagcaggacgacagggacaacaaaggactacagctgctgctgaacgccgag
gagctgaaggctctgtatgacttcgaggagcagtgtgtggaggagtatttcagagagaag
gaggacgaggagcagtcgtctagcaacgaacgcatccgggtcacatcggagagggtggag
aacatgtcgatgcgtctggaggaggtgaacgagagggagcactccatgaaggcttccctg
cagacggtggacctgcgactgggtcagctggaggagttctctggacgtatgatgaacgcc
ctggagaagctggccggggtggaccacaacgacctggtcagaacccagtcgggggtctcc
tcagtctgcgacacgtcctctctgctccgtcacagctccatcaacagctctgacggctac
agtctgtaccggtaccacctggagatgggagatgacacccgctctgaggctggggacatc
aggagccctgagaggaaggggagccagaggaaggtggttgagaggaaacggagtatgaga
gaaaccacgaccggcatcacggcctctgtgaaggagtacggagccacgttagacgtggtg
ggccccagagagaggaatcattccagctccagtgtctctgtctgcgaaggggcgaaggaa
accccaacccagaggcctgaggttcctacagagccttttccactgccctgcagccctgca
gcctcgatggacgcagccctggagaaggcaggagtgaccacggagaagatcaagctagaa
gcaaccatctcataccctctggagagggtcaggtccctgcagtaccagtcacccgagacc
cacagtgactgtctcacctccaggcccagatccaggagcactatggtgtacaacccagcc
gatgggggagatgagggggctacttgggccacagacgtcaacaacctcacaggggatcag
gaaacggttacctccagatctccgactattggtcactgggcagcgcgcttcgagtacaaa
gtccacccctgcccgttcggccacatgcccaaagtctccatggagaagctagtccccacc
accacagacacaaaggacgaggcagaggccaaagagacaacgacagacagtgaaccacag
gagccagggaagagtcagtcagagagcaaccaagatggaggtgaggagaaacaggaagcg
gaggctaaagatactggtggaggccttctgcttgtggcagaggacaggatgtatccatca
ctgaggtctaagagcctgaacaccaaccccaggaaagtgaaggccagaggggactgggca
cagagaaccaagtcagacagcagtgttaaagacctaacagctatgttaggagggactggg
gagacagagacagaggtagagacagaggtagagactgacagacagtattaa
DBGET
integrated database retrieval system
