Oncorhynchus kisutch (coho salmon): 109886561
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Entry
109886561 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-7
KO
K16498
protocadherin delta 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
109886561
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109886561
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109886561
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109886561
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
109886561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Glyoxalase
Motif
Other DBs
NCBI-GeneID:
109886561
NCBI-ProteinID:
XP_031675245
LinkDB
All DBs
Position
Unknown
AA seq
1131 aa
AA seq
DB search
MRRTGVGVCGGAVFSCSVTLTGPGELFHLLVLLLLTMTQLPVADSALRYRVAEEGPADVM
IGNVAADLGLSAGTGSGDVTFALESGSEFFKIDNVXGELTTGQRRIDREKLSQCQMIFDE
NECFLDFEVSVIGPLQSWVDLFEGRVVITDINDNTPSFPSSVLTLSVEENRPIGTLYLLP
TATDRDFGRNGIDRYELIQDGSSSGSAGSGLGSARRAAGGPMGRADGTGGGGDRRRGALD
NNGGGAGGGAGGGVRSSVFELQVADTPDGEKQPQLIVKGPLDREARDSYELVLRVRDGGN
PPRSSQALLRVAITDVNDNSPRFERAIYEAEMAENAPPGTPVLQVRASDRDVGVNGQVEY
VFGAATESVRRLLRLDEATGWLSVLHRIDREEVAQLRFTVTARDRGQPPRTDRATVVLVV
RDENDNVPIVEIRKIGRILVRDGVALVPENVLVDTPVALVQVSDRDQGENGAVTCTVVGD
VPFTLKPAGETALLPLPADDAFDRNRKKYFLHTSALLDYEATKEYSVTIVAVDSGSPSLS
SNSSLMVRVVDINDHTPTFAQAVVEVHFAENNQPGERVVTVVAADADSGKNAEIVYSLDP
SVTGLFYIDADNGDIRATGVLDREVRERYEFQVIARDKGFPSLQGSATVVIMVTDRNDNT
PKFVQEVFTFYVKENLLANSPVGMVTVTDADEGENAELSLFVEMEEEEGEEVDGGGGEKN
KGVGEEGGGRGGRGEDTFSIENNTGTIFSSVTFDRERRSTYTFRVRAIDGGAPPRSATAT
VSLIVTDENDNAPSVTSPTNDSYTLLPPASSTRTIVRTVAASDSDFGRNADLRFSLVGGN
PFRLFEIGLASGVITVAEPLERRHRGLHRLVVRVNDSGEPSLCATALVHVFINESLVNAT
LVDAQVARSLAAPLYLDIAGDPDSERALGKQRLSVAIGVLAGAAAVILVILLVVMARQCG
AQGKNGYEAGKKEPEEDFFSPQPAVPQTRGGTLDRGRKPRRDKRNGGAGGAGNKTERPLY
SGVVTVNGLRRHGNDHHVANIDDDDEDVSSASERLAARYCAWTETPGAHPYSPPAEGKKH
QAVQELPPSNTFVGSGGSSGSGGSGNADAMSLGSDQCSEYGSQTGNKYSKQ
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcggaggacaggggtaggtgtctgtggtggagcagtgttctcctgctcggtaactcta
actggaccgggggagttgttccacctcctagtccttctcctactaacgatgactcagctc
ccggtcgctgactcggctctccgttaccgggtggctgaggagggccccgcagacgttatg
atcggtaatgtggctgccgacctcggcctgtccgcgggcaccggctccggagatgtcaca
ttcgccctagagagcggctcggagttcttcaagattgataacgttnacggggagctgacg
accgggcagcggaggattgaccgggagaagctgtcccagtgtcagatgatcttcgatgag
aacgagtgtttcctggacttcgaagtgtctgtgattggtcccctccagagttgggtggat
ctctttgagggccgtgtggtcatcaccgacatcaacgacaacactccttcgtttccgtcg
tcggtgctgacattatctgtcgaggagaaccgtccaataggcacgctgtatctgttaccc
acggcgacggatcgcgacttcgggcgcaatgggattgatcgttatgagttgattcaagat
ggcagctcttccgggtcggcggggtcagggttggggtcagcgaggagggcagctggtggg
cctatgggaagagcggatggaacaggaggaggaggggataggaggagaggagcattggat
aacaacggaggaggtgcaggaggaggtgcaggaggaggtgtgaggagcagtgtgtttgag
ctccaggtcgccgacacgcccgacggcgagaagcaaccgcagctgatcgtgaaaggccct
ctggaccgtgaagcacgcgactcgtatgagctggttctacgggttcgggacggtgggaac
cctcctcgctcttcccaggcgctcctccgtgtcgccatcaccgatgtcaacgacaacagc
ccgcgcttcgagagagccatctatgaggccgagatggcggagaatgcgcctcccggaacc
cccgtcctccaggtgcgcgcgtcggaccgcgacgtcggcgtcaacggacaggtggagtac
gtcttcggagctgccacggaatctgtccgccgtcttctccgactggacgaggctaccggt
tggctgagcgtcctccacaggattgaccgggaggaagtggcccagttacggttcacggtt
acggcaagggatcgtggtcagccaccgcgcaccgaccgggcgaccgtagtcctggtggtc
cgggatgagaacgacaacgttccgatcgtggagatcaggaagatcggacggattctggtg
agggacggagtggcgctggtaccggagaatgttctggtggacacgccggtggcgctggtt
caggtgtcagaccgggaccagggggagaacggagcggtaacctgcacggtggtcggggat
gtaccgttcaccctgaaaccagcgggagagacggcgctcctgcctctgcccgcggacgac
gccttcgacagaaaccgtaagaagtatttcctccacacgtcggccctgttggattacgag
gccactaaagagtacagcgtgaccatcgtggcagtcgactccggttccccgtctctctcc
agcaacagctctctcatggtcagggtagtggacatcaacgaccacactcctaccttcgcc
caggccgtggtggaggtccactttgccgagaacaaccaaccaggagagcgtgtggtcacc
gtggttgcggcggatgccgattccggaaagaatgcagagattgtgtattcattggatccg
tccgttaccggcctgttctatattgatgctgataatggggatatccgtgcgacgggggtt
ctggaccgggaggtcagggagaggtacgagttccaggtgatcgccagggataagggattc
ccctcgctgcaggggtcggccacggtggtaatcatggtgaccgaccgcaacgacaacact
ccgaagttcgtccaggaagtgttcacgttctacgtgaaggagaacctccttgccaacagc
ccagtcggcatggtaacggtaacagacgcggatgagggtgagaacgcggagctgagtctt
ttcgtagagatggaggaagaagaaggagaagaggtggacggaggaggaggggagaagaac
aagggagtaggagaggagggaggaggaagaggaggaagaggtgaagacacgttctccata
gagaacaacacagggacgatcttctcctccgtgacctttgaccgggaacgccgttctacc
tacaccttccgcgtccgggccatcgacggcggggctccgcctcgctccgccacggcgaca
gtctccctcatcgtaactgatgagaacgacaacgccccctccgtgacctcacccaccaac
gattcctacaccctcctccccccggcctcctccacccggaccatcgtcagaaccgtggcc
gcctcggactcggactttggccgcaacgctgacctgcgcttctccctggtaggagggaac
cccttcaggctgtttgagatcggcctggccagtggagtgatcaccgtggcagagccccta
gagaggagacacagggggctgcatcgcctggtggtcagggtcaacgacagtggagagcca
tcgctctgcgccaccgcgctggtccacgtcttcatcaacgagagtctggtcaacgctaca
ctggtggacgcacaggtggctcgtagtctggccgcccctctctacctggacatcgcgggc
gaccccgacagcgagcgagcgttggggaaacagcgcctctcggtggccatcggtgtcctg
gcgggcgccgcggcagtcatcctggtcatcctcctagtggtgatggcccgccagtgcggc
gcccagggcaagaacggatacgaggccgggaagaaagaaccagaggaggatttcttcagc
cctcaacctgccgtgccacaaaccaggggagggacgttggaccgcggacggaagccccgc
agggacaaacggaacggaggcgccggaggagccggtaataaaaccgaacggccgctctac
agcggcgtcgtcacggtcaacgggctccgtcgccacggcaacgaccaccacgtcgccaac
atcgacgatgatgacgaggacgtgagcagcgccagcgagaggttggcggcgaggtactgc
gcgtggacggagaccccgggagcccacccctacagccccccagccgaggggaaaaagcac
caggctgtacaggagctgcccccctctaacaccttcgtggggtctggagggtccagtggt
agtggtggaagtgggaacgctgatgccatgtctctggggtcagaccagtgttctgagtat
ggatcccaaacggggaataagtacagcaaacag
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