Oncorhynchus kisutch (coho salmon): 109886761
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Entry
109886761 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 3-like
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109886761
Membrane trafficking [BR:
oki04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109886761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
109886761
NCBI-ProteinID:
XP_031675946
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MMDRIGAPGLLLVIWILIRFASVCVASCSGKVELHTERRGVIYSPSWPLNYPPGMNCSWN
IEGDRGEVITISFPNFDLEESGQCQGDWLLLGPTWREEYRVCGSLLPPPFISSRGRVWLY
FHSQANSSGLAQGFRLSYIRGPLGQSSCQSDEFLCGNGKCLPRTWRCNGLDECGDATDER
SCAPPPTPPRTSLCPPGTAPCTQAQSTRCLPPSLRCNGARDCPDGSDEAGCPDTACGKRL
GNFYGTFASPDFFRPNRSAVGVLRCSWLLDTQDPKPIVLQLDLGLGPGDSLHVYDGLVQR
AERLLQALSHHNNRRPALLESSRGQMSLQYLAQPLSPGHGFNATYQVKGYCFPGEHPCGL
DQGCYSERQRCDGYWHCPTGRDEEECPVCQEGEYPCEGGSGACYPASERCNNQKKCPDGS
DEKNCFDCHPGNFHCDTNLCIFETWHCDGQEDCLDGSDERDCLGAVPRKVITAALIGSLV
CGLLLVIALGCAFKLYSLRTREYRAFETQMTRLEAEFVQREAPPSYGQLIAQGLIPPVED
FPVYNPTQASMLQNIRTAMRRQIRRHSSRRATSHRRLGRLWNRLFHRGTRLRGQIPLLTP
PGSQVALGLHSYHTSEGPGARAGDGGGGAGMVGGMAGMGPARTPSRCSAAVGFALHAHTQ
ALSQSQSSHPSLESPNSPPSPSDSEPSEGSPCSPESPGSRVRLPLSELSTPGQQSDSLTS
APSILSQQCPLEGSTCHYTRRASRKLVLGLAANLRGVALRRYSPMGLTSPVTPPVLPPPD
SLPPCHHPLTSPQTSSPSGSSDDSQRFHALELPTRERRRRGIGVPNGLNTSSSEEEEEEE
EEEEDGDETLLIC
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcggattggagcgccggggcttctcctggtcatatggatattaatacggttc
gcttcggtctgtgtcgcgtcatgcagtgggaaggttgagcttcatacagagagaagaggt
gtaatctacagcccctcctggcccctcaactacccccccggaatgaactgttcctggaac
atagagggggacaggggagaggttatcaccatcagcttccctaactttgacctggaggag
tcaggtcagtgtcagggggactggctgctcctaggccccacctggagagaggagtaccgg
gtgtgtggctccctcctcccacctcccttcatctcctccaggggaagagtctggctctac
ttccactcacaggccaacagctcaggactggctcaggggttcagactgtcttatatcaga
ggtcccctgggccagtccagctgtcagagtgatgagttcctgtgtggtaacggtaaatgt
cttccccggacgtggcgctgtaacggcctggatgagtgcggcgacgctaccgacgaacgg
agctgtgccccccctccgacccctccccgcacctccctctgcccccccggcaccgccccc
tgtacccaggcccagtccactcgctgcctgcccccctcactgcgctgcaacggagcccgg
gactgccccgacggctcggacgaggcagggtgccccgacacggcctgcgggaaacgcctg
gggaacttctacggaacattcgcctccccagacttcttccgtcccaaccgaagcgctgtg
ggggtgctgaggtgctcctggctactggacactcaggaccctaagcccatcgtgttgcag
ctggacctggggttagggccaggggactccctccatgtctatgatgggctggtccagaga
gcagagcgcctcctgcaggccttgtcgcatcataacaacaggagaccagccctgttagaa
tccagtagaggacagatgagtctacagtacctggcccaaccactcagccctgggcatggg
ttcaacgctacataccaggtgaaaggttactgtttccctggggaacacccgtgcggattg
gaccagggctgttactctgaacgccagcgctgtgacgggtactggcactgccctacgggg
cgcgacgaggaggagtgcccagtttgccaggagggggagtacccctgtgaggggggcagt
ggggcctgctaccctgcctctgaaagatgtaacaaccagaagaagtgcccagacggttct
gatgagaagaactgttttgactgccatccgggtaacttccactgtgacaccaacctgtgt
atcttcgagacgtggcactgtgatggccaggaggactgtctggatggtagtgacgagaga
gactgtttgggagctgtgcccaggaaggtgatcactgctgccctgattggttctctggtg
tgtggcctcctccttgtcatcgctctgggctgtgccttcaaactctactccctccggaca
agagagtacagagcatttgagacccagatgacccgtctggaggcggagtttgttcagaga
gaggctccgccctcctatggtcagctgatcgcccagggcctcatccctccggtggaggac
ttccctgtgtacaaccccactcaggcctccatgctccagaacatccgtacagcgatgcgt
aggcagatcagaagacactcctcccgccgggccacgtcacaccgccgcctggggcgcctt
tggaaccgtctgttccaccgagggacccgtctccgcggccagatcccactcctcacaccc
cccgggtctcaggtggctctgggcctgcactcctaccacacctcggagggacctggagcc
agggctggggatggaggtggcggggcgggcatggtgggaggcatggcgggcatgggacca
gcaaggaccccctcccgctgctctgcagcagtaggcttcgccctgcatgcccacacccag
gccctgtcacagtcccagtcctcccacccctccttggagtctcccaactccccaccctcc
ccctctgacagtgaaccatccgaggggtctccttgttccccagagagcccgggtagcagg
gttaggttgcccctcagcgagctctccacccctgggcagcagagtgactcattaacgtct
gcccccagcatactgagccagcagtgccccctagagggcagcacatgtcattacactcgc
cgggcctccaggaagctggtcttggggctggctgccaacctgagaggggtggctctacga
cgctactcccccatggggctcacctcccccgttaccccccctgtccttccccctccagac
tccctgccgccctgccaccaccccctgacctccccccagacgtcatccccctcggggtct
tcagacgacagtcagaggttccatgccctggaattgccaacccgggagaggaggaggagg
ggtataggggtgcctaatggactgaacaccagcagcagtgaggaagaggaggaggaggag
gaggaggaggaggatggagatgagactctactgatctgctag
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