Oncorhynchus kisutch (coho salmon): 109886812
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Entry
109886812 CDS
T09179
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04137
Mitophagy - animal
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109886812
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109886812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109886812
03009 Ribosome biogenesis [BR:
oki03009
]
109886812
04131 Membrane trafficking [BR:
oki04131
]
109886812
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109886812
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109886812
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109886812
Membrane trafficking [BR:
oki04131
]
SNARE
SNARE associated proteins
Others
109886812
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109886812
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109886812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
CDC48_2
AAA_22
AAA_33
AAA_2
TIP49
RNA_helicase
AAA_14
NPHP3_N
AAA_28
nSTAND3
ATPase
AAA_17
Mg_chelatase
Vps4_C
Parvo_NS1
ATPase_2
AAA_18
AAA_7
IstB_IS21
ABC_tran
ResIII
AAA_24
DUF815
SLFN-g3_helicase
Sigma54_activat
Viral_helicase1
TsaE
NACHT
NB-ARC
Rad17
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
109886812
NCBI-ProteinID:
XP_031667280
Ensembl:
ENSOKIG00005039478
UniProt:
A0A8C7JPJ0
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MPAPGGTDPKGEDFSTAILKQKHRPNRLVVDEAHNEDNSIVSLSQAKTEELQLFRGDTVV
LRGRKRRETVCIVLTDDTCPDERVRMNRVTRNNLRVRLGDVISVHACPDVKYGVRIHVLP
IDDTIEGLTGNLFDVFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVETDPAPHCIVAP
DTVIHCEGQPINREDEEESLTDVGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSP
AIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKQRTHVIVMAATNRPNSIDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLSDDVDLERVSMDAHGHVGSDLAALCSEA
ALQAIRKKMTLIDLEDDTIDAELLNSLAVTNDDFRWALGQSNPSALRETVVEVPNVNWED
IGGLGEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDAGGAAD
RVINQILTEMDGMSNKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDTASRTAILN
ANLRKSPIARDVDLAYLSGITQGFSGADLTEICQRACKLAIREAIEAEIKAERQRQTHPG
TAMDEDCDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSGSQ
SGGQGSGAGGQFRDEVEDDLYQ
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccctggaggaacagatcctaagggggaggatttctccactgctatcctgaag
cagaaacacagacccaatagactggtggtggatgaagcccacaatgaagacaacagcatc
gtcagcctctcacaggcgaagacagaggagctgcagttgttccgtggcgacacggtggtc
ctgcgggggaggaagcggcgtgagacggtgtgtatcgtgttgacagacgacacctgtcca
gacgaacgcgtccgcatgaaccgcgtcacacgcaacaacctgagggtacgcctcggtgat
gtcatcagtgtccatgcatgcccagatgtgaagtacggcgtgcgtatccatgtcctgccg
atagatgacaccatcgaagggttaacgggaaacctgtttgacgtcttcctgaaaccctat
ttcttggaagcctatcggcctgtacacaaaggcgacatcttcctggtgcgagggggcatg
cgggcagtggagttcaaggtggtggagacagaccccgccccccactgcatcgtcgccccg
gataccgtcatccactgcgagggacagccaatcaacagagaggacgaggaggagagtctg
actgacgtaggctatgatgacattggaggttgtcgtaaacagttagctcaaatcaaagaa
atggtggagcttcctctcagacatcctggactattcaaggctataggagtcaagcctccc
aggggtattctgctgtatggacctccaggtacagggaagacactggttgcccgggccgtt
gccaacgagactggagcattcttcttcctcatcaatggtcctgagatcatgagtaagatg
gccggggagtcagagagcaacctgaggaaagccttcgaggaggcagagaaaaactctccc
gccattattttcatagacgaactggattctatcgctcctaagagagagaagacccatggg
gaggtggagaggcgtatcgtatcacagctcctcaccctgatggatggactgaagcagaga
actcacgttatcgtcatggcagccaccaacagacccaacagcatcgaccctgccctgaga
cgctttggcaggtttgacagagagatcgacatcggcatcccagactccactggtagactg
gagatactgcagattcacaccaagaacatgaagctatctgacgacgtggacctggagagg
gtttccatggatgcgcatggccatgtggggtcagatctggcagctctgtgttctgaggcg
gctctgcaggccatcaggaagaagatgaccctgattgacctagaggacgacaccattgat
gctgaactgctcaactcactggcagttaccaacgatgacttcaggtgggcgttggggcag
agtaacccgtcagctctgagggagacagtagtggaggttcctaatgttaactgggaggat
ataggaggactgggagaggtcaagagagaactgcaggaactagtacagtacccggtggag
tacccagataagttcctgaagttcggtatgaccccgtcacgaggagtgttattctatgga
cccccaggctgtggaaagaccctgctagccaaggcgattgctaacgagtgccaggccaac
ttcatctccatcaagggacctgagctgctcaccatgtggttcggagagtcagaggctaat
gtcagggacgtcttcgacaaggccagacaggcggccccctgcatcctgttctttgacgag
ctggactccattgccaagtccagagggggcggagccggggacgcagggggcgcggccgac
agggtcatcaaccagatcctcacggagatggacggaatgtccaacaagaagaacgtcttt
attataggagctaccaacagacctgatataatagactctgctatcctccgtccagggagg
ctggatcagctcatctacatccctctaccagacacagcctcccgtactgccatcctcaac
gcaaacctacgcaagtcccccatcgccagagatgtagacctggcctacctgtctggtatc
acccagggtttcagtggggcagacctgacagagatctgccagagggcctgtaagctggcc
atcagagaggccatagaggctgagatcaaagcagagcgccagagacagacccacccaggc
accgccatggatgaggactgtgaccctgttccagagatcaggaaggatcactttgaagag
gccatgaggttcgcccggcgctccgtcagcgacaacgatatcaggaagtatgagatgttc
gcccagacactacagcagagcagaggctttgggaacttcaggttcccctctggctctcag
tccggaggtcaagggtcgggggcaggggggcagttcagagacgaggtagaggacgacctc
taccagtga
DBGET
integrated database retrieval system
