Oncorhynchus kisutch (coho salmon): 109886960
Help
Entry
109886960 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: slit homolog 2 protein-like
KO
K06839
slit 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109886960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oki00536
]
109886960
Glycosaminoglycan binding proteins [BR:
oki00536
]
Heparan sulfate / Heparin
Axon guidance molecules
109886960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
Laminin_G_2
Laminin_G_1
LRR_5
LRRNT
LRRCT
LRR_9
EGF_TEN
LRR_1
hEGF
EGF_TGFA-like
LRR_14
Laminin_G_3
EGF_3
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
cEGF
Motif
Other DBs
NCBI-GeneID:
109886960
NCBI-ProteinID:
XP_031670904
Ensembl:
ENSOKIG00005038820
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MSPPTMRGHNVAEVQKKEFVCTGHQSSLSCSVLQCPDSCTCSNNIVDCRGKSLTEIPDNL
PETITEIRLEQNSIKAIPAGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN
KITEISKGLLEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFAS
LRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQIKSKKFRC
SGTEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTKIPEHIPQYTQELRLNNNEFS
VLEATGFFKRLPQLKKINLSNNRISDIEEGTFEGATGVNELILTSNRLENIHQGMLQGLN
GLRTLMLRSNRIRCVSNSSFVGLSSVRLLSLYDNLITSMTPGAFDTLHALSTLNLLANPF
NCNCHLAWLGDWLRRKRIVTGNPRCQNPYFLKEIPIQDVAAQDFTCDDGNDENSCSPVLR
CPAECSCLDTVVRCSNKGLSTLPKGLPKDTTELYLDGNQLTQVPVELSNYKHLTLIDLSN
NQISTLSNYSLRNMTELLTLILSYNRLRCVPVRAFDGLKSLRLLSLHGNDISVIPEGAFK
DLASLSHLALGANPLYCDCRMQWLSDWVQSGYREPGIARCAGPGDMTDKLLLTTPSKKFT
CTGPLDVGIQAKCDPCLSNPCHNDGTCSNHPVTFYRCSCPYGFKGQDCEEPLHACIGNPC
QNAGTCHLKEGERSNSWCVCAEGFEGDVCEINVDDCEDNDCENNSTCVDGVNNYTCMCGL
EYTAATNEVERGELCEEKLDFCAPELNPCQHDSKCILTLQGYKCECTPGYVGDQCELDYD
DCEENKCQNGAQCIDAVNGYTCVCPEGYSGLFCEFSPPMVLPRTSPCDDHECMNGAQCVV
VETDPRCQCLHGYEGEWCETLASVNFVNRRSYLQLPSSLITPETNITLQIATDEDSGVLL
YKGDKDHITIELYRGRLRVSYHTGTNPASAIYSVETVNDGVFHVVELVASDQTVSLSIDG
GPVKSINSLSKQSTLSIDSPLYLGGMPDRWSVSAALQSGVGGQNGTSFHGCLRNLYINGQ
LQDLGVGLEQGQTGVEAGCQPCQAGVCGQGECHPTGQRGFSCTCHPGWTGDRCQDQVNNP
CDGNKCIHGSCLPINSYSYSCRCQPGFLGVLCDEADQEVLDPCQLTRCKHGKCRLSGLGK
AYCQCSPGYTGDACDRASSDPPPPGRGVTQRWSVEGNGSELSTSSRGAIRRVKPRRRSPV
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctcctaccatgaggggacacaacgtggctgaggtccagaagaaagagttcgta
tgcacaggccaccagtcctccctctcctgcagtgttctccagtgtccggactcctgtacc
tgcagtaacaacatagtggactgtagaggaaagagccttactgagatacctgacaacctg
cctgagaccatcacagagattcggttggaacagaattctatcaaggctattcctgctgga
gccttctctccttacaagaagctacgcagaatagatctcagtaataaccagatatccgaa
ctggcaccagatgctttccaaggcctgagatctctcaactctctggtgctctacgggaat
aagatcacggaaatctccaaaggattgttggagggactgttttctcttcagctactgctg
ttgaatgctaataagatagcgtgcctgcgtgtcgatgcgttccaagacctccacaacctc
aacttgctctctctatacgacaacaaactacagaccatcgctaagggaacgtttgcttca
ctacgagccatacagaccctccacctggcccagaacccgtttatctgtgactgccatctg
aagtggctggcagactacctccaagacaacccgattgagaccagcggagctcgctgcacc
tccccccgtcgcctcgccaacaaacgcatcggacagatcaagagcaagaagttccgctgt
tcaggtacggaggactaccgcagtaagctgggaggagactgttttgccgacctggcctgt
ccggaaaagtgtcgatgcgaagggaccacggttgactgttccaaccagaagctgaccaag
atacctgaacacatccctcagtacacacaggaacttcgtctgaacaacaatgagttttca
gtgctggaggcgaccgggttctttaagaggctgcctcagctcaagaagattaacctcagt
aacaaccgtatcagtgacatagaggagggtacatttgaaggagcaacgggagtcaatgag
ttgatcctgacttctaacagactggaaaacatccaccagggcatgttacagggtctcaac
ggactacgcacacttatgttgaggagtaatcgtatcaggtgtgttagtaacagcagcttt
gtgggtctgagttctgtcagactgctgtcactctacgacaacctgatcacctctatgacc
ccgggagccttcgacacactacacgcgctgtccacactgaacctgctggccaatcccttc
aactgtaactgccacctggcatggcttggtgattggctaaggaggaagcgtatcgtcacg
ggcaacccccgctgtcagaacccttacttcctgaaagagatccctatacaggatgtagcc
gcacaggacttcacctgcgacgacggtaatgatgagaacagttgtagtccagtgttgagg
tgtcctgcagaatgcagctgtctggatacagtggtccgctgtagtaacaagggcctcagc
acccttcctaaaggactgcccaaggacaccacagaactgtatctggatggtaaccaactc
acacaggttccagtggaactctcaaattacaagcacttaacactcatcgatctgagtaac
aaccaaatcagcacgttgtccaactacagcctgagaaacatgacagaactactgacacta
atcctaagctacaaccgtttgaggtgcgtaccagtcagggccttcgatggactcaagtct
ctacggttactgtctctccatggaaacgacatatctgtgataccggagggagctttcaaa
gacctggcctcgctctctcacctggctctgggggccaaccccctgtactgtgactgtagg
atgcagtggctgtctgactgggtgcagagtgggtatagggaaccgggtatcgcccgctgt
gccggtcctggagacatgacagacaaactactgctgaccacaccgtccaagaagttcacc
tgcacaggtcctctagatgtgggtatccaggcaaagtgtgacccgtgtctctccaacccc
tgtcacaacgacggtacctgctccaaccaccccgtcaccttctaccgctgtagctgcccc
tacggattcaagggtcaggactgcgaggaacctctccatgcctgtatcggtaacccctgt
cagaacgctggtacctgccatctgaaagaaggggaacgcagtaactcctggtgtgtgtgt
gcggagggtttcgagggggatgtgtgtgagatcaacgttgacgactgtgaagacaacgac
tgtgagaacaactcaacctgcgtcgacggagtcaacaactacacctgcatgtgtggcctg
gagtacacagctgctaccaatgaggtggagagaggtgagctgtgtgaggagaaattagat
ttctgtgctccagagttgaacccctgccagcacgactccaaatgcatcctgacccttcag
gggtacaagtgtgagtgtaccccaggctacgtgggggatcagtgtgagctggactatgat
gactgtgaggagaacaagtgtcagaacggagctcagtgtattgatgcggtcaacggatac
acctgtgtctgtcctgagggatacagcggtctgttctgtgagttctctcctcccatggtt
ctgccgcgcaccagtccctgtgacgaccacgagtgtatgaacggagcgcagtgcgttgtc
gtggagacggacccccgctgtcagtgtctccatggttacgagggcgagtggtgcgagacg
ctagccagtgtcaacttcgtcaaccgacggtcttacctgcagctgccctctagtctaatc
acacctgagacaaacatcacactacagattgctacagatgaggacagtggtgtgttgctg
tataaaggagacaaggaccacattaccatagagttgtatagaggacgtctccgtgtcagc
taccacactggaacaaaccctgcctctgctatatacagtgtggagacagtaaatgatggt
gtattccatgtggtagagttggtggcatcagatcagactgtgtctctgtctattgatgga
ggaccagtcaagtctatcaactctctgagtaaacagtcaacactcagcatcgattctcct
ctatacctgggaggtatgccagatcgttggtccgtctctgcagcgctgcagtctggagtt
ggggggcagaacgggaccagcttccatggctgtctcaggaacctctacatcaacggacag
ctgcaggacctgggggtcgggctggagcagggacagactggggttgaagcgggatgccag
ccatgccaggcaggtgtgtgtggccagggtgagtgccacccaaccggtcagagaggcttc
tcctgtacctgccaccctgggtggaccggagaccgttgtcaggaccaggtcaacaacccc
tgtgatgggaacaagtgtatccatggttcatgtcttcctatcaattcctactcctactcc
tgtcgctgccagccaggattcctcggggtgctgtgtgacgaggcagaccaggaagtgctg
gacccctgtcagctgaccaggtgtaaacatgggaaatgtaggctgtctggcctgggcaag
gcctactgtcaatgtagcccaggatacacgggggacgcctgcgacagagcctcctctgat
ccaccgccccccggcagaggggtcacccagaggtggtctgtcgaggggaacggctccgag
ctgtctaccagctccagaggggctattcggcgtgtgaaacccaggagaaggtctcccgtc
tag
DBGET
integrated database retrieval system
