Oncorhynchus kisutch (coho salmon): 109886989
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Entry
109886989 CDS
T09179
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecule (CAM) interaction
oki04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109886989
04517 IgSF CAM signaling
109886989
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
LRR_14
LRR_9
LapA_dom
Motif
Other DBs
NCBI-GeneID:
109886989
NCBI-ProteinID:
XP_031680208
Ensembl:
ENSOKIG00005050749
LinkDB
All DBs
Position
LG5:8676706..8688083
Genome browser
AA seq
867 aa
AA seq
DB search
MPRILTSPHGSTSLTQASFGLATVFPTLHNGYNGQKMLPRILFLCSFFAAACFQDIHPSK
VFLSESCDSLCTCEEKDGILYLNCEERNISKISQIKVPSALPFHLNLYKNDLVELNAEDL
EGLKNAVSLHLGANSIQELEPGVFSALGSLKKLHINSNFLVTLKEDTFHGLVNLEFLQAD
TNFIRVVEPGAFSKLIRLKVLILNDNAIEFLPSNIFRFVPLTHLDLRGNQLQTLPYVGFL
EHIGRIMELLLEDNDWMCDCEILHLKIWMENMRAQSAIGEVVCSSPHHLRGTILAKIKRD
VLCPSHADINLEEPSKSLDMVVTPSSKVAEIPKLDDVVKFPTPSYVPGSPCVEHCSCHNH
PVAGFLMHCQDRGIQRISDIGILEQSPTKLVLTGNMIQRLLKYDFVTYDSLELLNLANNR
IDYIDNETFLSLSNLKKLYLNGNRIETLSATMFIGLHNLEYLYLEYNIIKEIVPGAFNPL
PNLKLLSLNNNLLTSLPLQIFRNVPLTKLNLRKNLLMHLPVSNVLDQLDSLEQIYLEDNP
WDCSCDLISLKQWVEKLRKDTVVGSILCHTPRKVEKAELRALRNELLCRGLVTYSLPTDE
DETTTVATDGSRSGFFSSITDSVPLSVLILSLLVIFLMVIFCSAGIVAFLVHRQRRRVKK
KQAEEQPRESSSPIHLQYSMYGQKTTHHTLGQRTGSTVYDERSHSPIVQICRNPTYCTQH
KEYESDLNELDEPKHICRSIMETENTSPLTGSNLKFRAVTSDCPTEFVTLGDASSLYKNI
LERERVRELQQLGITEYLRKNMAQLQPTVEMQVPGHHEELKLMETIMLSRPRKVMVEQTK
NEYFELKANLHTEPDYLEVLEHQTAFN
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcatccttacgtctccacatggatcaacctctctaacccaagcatcatttgga
ttagccacagtctttcccactctgcacaacggatacaacggacagaaaatgctaccccgc
atccttttcctttgctcatttttcgctgctgcttgtttccaagacatccacccctccaag
gtatttctgagtgaatcctgtgactcattgtgtacttgtgaagaaaaagatggcatcctg
tatcttaactgtgaggagagaaatatcagcaagatctcccaaatcaaagtgccgtcagct
ctacctttccacctcaatctgtacaaaaacgacttggtggagttgaatgcagaagacttg
gaaggtttaaagaatgccgtttcacttcatctcggggctaatagcatacaagagcttgaa
cctggggtctttagtgcactgggctccttgaagaagctccacatcaacagtaatttcctg
gtcacgttgaaggaagacacttttcacggcttggtaaatttggagtttctccaagcggac
acaaacttcatccgcgtggtcgagccgggggcattcagcaaactcatccgcctcaaagtt
ctgatcctcaacgacaacgccatcgagtttcttcccagcaatattttccggtttgttccg
ctcacccacttggacctgcgggggaaccagttacagaccctgccttacgttggcttcctg
gagcacattgggcggatcatggagcttcttctggaggacaacgactggatgtgcgattgt
gagatccttcacctgaagatctggatggagaacatgcgggcccagtcggccattggggag
gtggtctgcagcagcccccaccacctcaggggcaccatcctggccaaaatcaaacgggat
gttctctgcccctctcacgctgatatcaacttagaggagccttccaagtcactggacatg
gtggtcactccgtcttccaaagtggcagagattccgaagttagatgatgtcgtaaagttt
ccgacaccttcttatgttccagggagtccttgtgtggagcactgttcttgtcacaatcac
cctgtggctgggtttttaatgcattgtcaggatagagggattcaacggatttcagatatt
ggaatacttgagcaaagccctaccaagctggtgctcacaggaaacatgattcagagactg
ttgaaatatgactttgtcacatatgacagtttagagttattgaatttagccaacaatcga
attgattacattgacaatgaaacttttctcagcttaagcaatttgaaaaaactttatctc
aacggcaacagaattgaaaccctttccgcgaccatgttcattggactccacaaccttgaa
tacctatatttggaatataacattatcaaagaaattgttccaggagcttttaatcctttg
ccaaatctcaaactcttgtctttgaataacaatctgctgactagtctcccattgcagata
tttcgcaacgtgcccctcaccaaactgaacctgagaaaaaatctgctcatgcacctgcct
gtaagcaacgtgctggaccagcttgactctttagagcagatttatttagaggacaacccc
tgggactgcagctgtgacttaatcagtctcaaacagtgggttgagaagctgaggaaggac
acagtcgtaggttccattttgtgtcacacaccgagaaaagtggagaaggctgagttgagg
gcccttagaaatgagttgctgtgccgcggcctagtgacctactccttgcccacggatgag
gacgagacaaccacagtggcgactgacggctctaggagcggtttcttcagctcaatcacg
gactcagttccgctctccgttctgatccttagcttgctcgtcatcttcctcatggtcatc
ttctgttcagcagggattgtggcattcctcgtgcacagacagcgaaggagggtgaagaag
aaacaggcggaggagcagccgcgggagagcagcagccccatccacctgcaatacagtatg
tacggccagaaaaccacccaccacacactggggcagaggaccggaagcaccgtgtacgat
gagcgctcacacagccccatcgtccagatctgccgcaaccccacctactgcactcagcat
aaagaatatgagtccgacctcaatgaactggacgaaccaaagcacatctgtcgtagcatc
atggagacagagaatacttcccctcttacaggctctaatttgaagttcagagctgtgacg
tcagactgcccaactgagttcgtaacactcggagacgcgagctccctctataaaaacata
ctagagagggagagggttagggagctgcagcagctcggaattactgaatacctcaggaaa
aacatggcccagctacaaccaacggtagagatgcaggttccaggacaccacgaggaactg
aaattaatggagactattatgctgtcgagaccgaggaaggtcatggtggaacaaacgaaa
aacgagtactttgaactcaaagctaacctacacaccgagccagattatttggaggttctg
gagcatcaaactgcatttaactga
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