Oncorhynchus kisutch (coho salmon): 109887162
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Entry
109887162 CDS
T09179
Name
(RefSeq) lethal(2) giant larvae protein homolog 1-like
KO
K06094
lethal(2) giant larvae protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109887162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109887162
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109887162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Lgl_C
WD40_CDC20-Fz
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
109887162
NCBI-ProteinID:
XP_031677290
Ensembl:
ENSOKIG00005046416
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MMKFRFRRQGNDPQREKIKQELFAFNKTVEHGFPHQPCALAFDPQLQLMAVGTKSGAMKI
YGSPGVEFTGLHRDAAAVAQIHFLQGQGRLLSLLDDNTLHLWELGGASRDRGGAKSEGVV
YLEEKRNYSLLGRPGLESCSASRVTVLLLLRSCDLLCVGTEGGGIHFLDLPRLSLRDNQS
LLLDQVMQSVPEDYRCGKSLGPVESLQEHPKQPGKILIGYSRGLVVLWDLSTCNAEHMFL
GKQQLESLVWERSGSSFVSSHSDGGYSVWAVASGNTYTHQPVSSSIPYGPFPCKAINKIL
WRTIQSGCPVVLYSGGMPRASYGDRHCVTIQQDKQHVTLDFTSRVIDFFTVHTTDLEHDY
DDPKALVVLLEEELVVIDLLTTGWPSVPPPYLAPLHSSAITTSCHLDNVPAKLWDRLAAA
GNSQGAQPGVRHAHGSWPICGGKNLAPPPRQQELLLTGHEDGTVRFWNVSAVAMTPLYKL
STANVFHTDCDPNDDPLDPTNDPEALQEEEWPPFRKVGCFDPYSDDPRLGIQKISLCKYS
CRLVVAGTAGQVIVLGLSDEWSDHTVDVSTVDLLQDREGFTWKGHDRLEPRASPAPFPPG
FQPLVLVQALPPASVTSVMLHAEWNLVAFGTSHGFGLFDYHRRTAVLARCTLHPNDSLAM
EGPLSRVKSLKKSLRQSFRRIRKSRVSGKKRPIPTPTSKIQEANAALADQEEVAPVQRRI
EPRSADDSLSGVVRCLCFADTYLRDGTHHGPTLWAGTNSGSVYAYALEVPGVGSGRGRPG
GEGSGCVEAVLGKEIQLMHRAPVVSVCVLDGRGKPLPEPYQASLDLATAPDMTNPHSVLI
ASEEQLKVFSLPKVGAKTKFKLTAHEGCRVRRVAMVTVCSTAQEDYSETSLVCLTNLGDL
HLFNVPALRPQVRYDCIRKEDISGIASCVFTRNGQGFYLISPSEYQRFSLSAKVITEPLC
TVELERPLETHISDDAAIPLRANGTHRNQAEGLTEDPQCGLSSPPPLSPLDSPLSMADVS
LDTTGELTVEDVRDFLTSVDEVENNLRNITEEDGCSLGVLIT
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtttaggttccgtcggcagggcaacgacccacagagagagaaaattaaacag
gaattgttcgccttcaacaagaccgtggaacatgggttcccccatcagccctgtgctttg
gcctttgacccccagctgcagctcatggccgttgggaccaagtctggagccatgaagatt
tatggatctccaggggtggagtttacaggactacacagagacgctgcagccgtagcgcag
atacacttcctccaaggacagggccgtctgttgtcgctgcttgatgacaacacgctgcac
ctgtgggagctgggcggagcttcccgggacaggggaggggctaagagcgagggtgtggtc
tacctggaagaaaaacgcaactacagtctcctgggacgacctggactagagagctgcagt
gcgagccgtgtgacagttctgctgttgttgaggtcatgtgacctgctgtgtgtcggcacc
gagggagggggcatacacttcctggatctgccacgcctctcgttgagggataaccaatca
ctcctgctggaccaggtgatgcagagcgtacctgaggactacaggtgtgggaagtctctg
ggaccggtggagtcgttacaggaacaccccaagcagccagggaagattctgattggctac
agcagaggcctggtcgtcctatgggatctcagcacctgcaacgcagaacacatgttcctg
ggaaaacagcagctggagtccctggtgtgggaacgttccggtagctccttcgtcagttcc
catagcgacggggggtacagcgtgtgggctgttgccagtggtaacacgtacacacaccag
cctgtgtcctcgtccatcccctatggtccgttcccttgtaaagccatcaacaagatctta
tggaggacgattcagtcagggtgtccagtagtcctctacagtggaggaatgcccagggcc
agttatggagaccgtcactgtgtgaccatccaacaggacaaacaacacgtcactctagac
ttcacatccagagttatagacttcttcactgtccacaccactgacctggagcacgactat
gatgatcctaaagccctcgtggtgttactggaggaggagctggttgtaatagacctcctg
accaccgggtggccctctgtccctcctccctacctggctccactccactcctccgccatc
accacatcctgtcacctggacaacgtccccgccaagctctgggaccgcctggccgccgcc
gggaacagccagggcgctcagcctggagtgagacacgcacacgggagttggccgatatgt
ggagggaagaatctagcgcccccgcccagacaacaggagttgctgctgacggggcatgag
gacggtacagtgcggttctggaatgtgtctgctgttgccatgactcctctctacaagctc
agcacggctaacgtcttccataccgactgtgaccctaacgacgaccccctggaccctacc
aacgaccccgaagcactgcaagaggaggagtggcctcccttcaggaaggtgggctgtttc
gatccttatagtgatgatcctcgcctggggatccagaagatcagtctgtgtaaatacagc
tgtagactggtggtggccgggaccgctggacaggtgatcgtgctgggtctgagtgatgaa
tggtcggaccacacggtcgatgtctccacggtcgacctgcttcaggaccgagaggggttc
acctggaagggccatgataggctggagccccgagccagccccgcccccttccctccaggc
ttccaaccattggtcctggtgcaggccctgccaccagcctctgttacctccgtgatgctg
catgcggagtggaacctcgtagcgttcgggacgagtcacggcttcggactgtttgactac
cacagacgcactgctgttctggccaggtgtaccctgcaccctaacgactccctagcgatg
gagggtcctctcagcagagtgaagagtctgaagaagtctctcagacagagcttcagacgc
atcaggaagagtagagtgtctgggaagaaacgccccatccccacccctaccagcaagatc
caggaggccaacgcagcgctagctgaccaggaggaagtagctccggtgcagaggaggatc
gagccgagatcagctgacgactctctatcaggagtggtgcgatgcctctgtttcgctgat
acgtacctcagagacggtacacaccacggcccgacgctgtgggcggggacaaactcaggg
agtgtgtatgcttacgcgttggaggtcccgggtgtggggtcgggccgtggacggccgggg
ggtgaggggagcgggtgtgtggaggccgtgttggggaaagagatccagctgatgcacagg
gctccggtcgtgtccgtctgcgttctggacggacgggggaaaccgttaccagaaccttac
caagcctctctggacctggctactgctccagacatgactaacccacactctgtcctcatc
gcttcagaggaacaactcaaggtgttcagtcttcctaaggtcggtgcgaagaccaagttc
aagctgacggctcatgagggttgtcgtgtgcggagggttgccatggtgacggtgtgttcc
acagcccaggaggactacagtgagaccagtctggtctgtctgaccaaccttggagacctg
cacctgtttaacgtacctgccctacggccacaggtacgttatgactgtatccgtaaagag
gacatcagtggcatcgcttcctgtgtcttcacaaggaacgggcaggggttctacctgatc
tctccatcagagtaccagcgtttctccctgtcagctaaagtcatcacagaacctctgtgt
actgtggagctggagagacctctggagacacacatcagcgacgacgcagccatacctctc
cgggccaacggaactcaccggaaccaggctgaagggttaaccgaggacccccagtgtggc
ctgtcctccccgcctcccctctcccctctggactcccccctcagcatggctgacgtcagc
ctggacaccaccggagaactcactgtagaggacgtcagggacttcctcacttccgtggac
gaggtagagaataacttgaggaacatcacagaggaggacggatgctctctaggagtcctg
atcacctga
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