Oncorhynchus kisutch (coho salmon): 109887187
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Entry
109887187 CDS
T09179
Symbol
rarb
Name
(RefSeq) retinoic acid receptor beta isoform X1
KO
K08528
retinoic acid receptor beta
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109887187 (rarb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oki03310
]
109887187 (rarb)
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109887187 (rarb)
Nuclear receptors [BR:
oki03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
109887187 (rarb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109887187
NCBI-ProteinID:
XP_031644613
Ensembl:
ENSOKIG00005004510
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Position
LG14:64827679..64984010
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AA seq
495 aa
AA seq
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MKTASWARPRSPSPQPRPPRSPSPGPQLVQMRQYRPGVGAYPFLFPSVISALPLANRRAS
PPALRLQVQQPSSSSSTPSPAAIETQSTSSEELVPSPPSPLAPPRVYKPCFVCQDKSSGY
HYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFGVGMSKESV
RNDRNKKKKESPKPELTENYELSAEQEAIIEKIRKAHQETFPSLCQLGKYTTKSSAEQRV
RLDLGLWDKFSELATKCIIKIVEFAKRVPGFTGLTIADQITLLKAACLDILILRICTRYT
PDQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFAHQLLPMEMDDTETGLLSAICLISGD
RQDLEEPSKVDQLQEPLLEALKIYVRKRRPSKPHMFPKTLMKITDLRSISAKGAERVISL
KMEIPGSMPPLIQEMLENSEGQDGQSSTEGEDGSSPKKGIPKGGKSCPVSPDPDPDASDS
EGPTAAPKEEEEEDP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagccagttgggcccggccccgctcccctagcccccagccccgaccaccacgc
tcccccagtcctgggccccagctcgtccaaatgaggcagtacaggcctggggtgggggcg
taccccttcctgttcccctcggtcatcagcgctctgcccctggctaaccgacgggcttcc
cccccggctctgaggctgcaggtccagcagccctccagcagcagtagtactccatcgcct
gcagccatcgagacccagagcaccagttctgaggagctggtcccaagtcccccgtccccc
ctggccccgccccgcgtctacaagccctgcttcgtgtgccaggacaagtcctcggggtac
cactatggtgtcagcgcctgcgagggctgcaagggttttttccgtagatccatccagaag
aacatggtgtacacgtgtcaccgggacaagaactgcatcatcaacaaggtgaccaggaac
cgctgtcagtactgccggctccagaagtgctttggcgtgggcatgtccaaagagtctgtc
cggaacgaccgcaataagaagaagaaggagagtcccaagccagagctgaccgaaaactat
gagctgagtgcagaacaagaggccatcatagagaagatacgcaaggctcatcaggagacc
ttcccatcgctctgccagctggggaaatacaccacgaagtcgagtgcggaacaacgcgtg
aggctggacctggggctgtgggataagttcagtgagctggctactaagtgcattataaag
atcgtggagtttgccaaacgagtgcctggcttcacaggactcaccatagctgaccagatc
acgctgcttaaagctgcctgccttgacatactgattctacgtatctgtacgaggtacact
ccggaccaggacaccatgacgttctcagacggtctgaccctgaaccggacccagatgcac
aacgcaggattcggcccgctcaccgacctggtgttcaccttcgcccaccagctgctgccc
atggagatggacgacacagagacaggcctgctcagcgccatctgcctcatctctggagac
cggcaggacctggaggagccctctaaggtagaccagctccaggagcctctactggaagct
ctgaagatctacgtgaggaagaggaggcccagcaagccacacatgttccccaagaccctg
atgaagatcactgacctccgcagcatcagcgccaaaggtgcggagcgggtcatctcgctg
aagatggagatccctgggtccatgcctcctctgatccaggagatgctggagaactcagag
ggccaagacggccagagcagcaccgagggcgaggacggcagcagccccaagaagggaatc
cctaaggggggtaaatcctgccctgtgtcccctgaccctgacccagatgcttcagacagc
gaagggcccacagcggcccccaaggaggaggaggaagaggacccctag
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