Oncorhynchus kisutch (coho salmon): 109887216
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Entry
109887216 CDS
T09179
Name
(RefSeq) synaptic vesicle glycoprotein 2A-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109887216
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109887216
Transporters [BR:
oki02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
109887216
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
MFS_2
MFS_4
Pentapeptide_4
Motif
Other DBs
NCBI-GeneID:
109887216
NCBI-ProteinID:
XP_031642615
Ensembl:
ENSOKIG00005029023
LinkDB
All DBs
Position
LG13:60005148..60055021
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AA seq
736 aa
AA seq
DB search
MDDDYGRDGRQDFIRGAKDIAKVVKKQAGKKVGRSVDKMADEYTKRSYKRFEEEDDDDDY
PVQQSQDGDGYYRNDSRANDDEGGHSDSTEGHDEDDEIYEGEYQGIPRAESGKTVPVDGI
APQAQIRDLAQFEAERRKDQEELAQQYETILQECGHGKFQWTLYFVLGLALMADGVEIFV
VGFVLPSAEKDMCLSEESKGMLGLIVYLGMMVGAFLWGGLADRIGRRQTLLISLSINSVF
AFFSSFVQGYSSFLLCRLLSGVGIGGSIPIVFSYYSEFLAQEKRGEHLSWLCMFWMIGGI
YASAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVAAISALTTMPESPRFFLENG
KHDEAWMILKQVHDTNMRAKGYPERVFSVTTIKTVKQMDELVDMGEGTAWHQRWRMKLAD
LFNQVWSNFLAIFSPEYRRTTLMMMAVWFSMSFSYYGLTVWFPDMIKYLQKQEYSSRTKV
FIKEKVEHVTFNFTLENQVHRNGEYFNNKFMNLKMKSMVFEDSLFEECYFEDITSSNTFF
KNCTFIATLFYNTDLFKYRLINSKLVNSTFLHNKEGCMLSDFSDENSAYMIYFVSFLGTL
AVLPGNIVSALLMDKIGRLRMLAGSSVISCVSCFFLSFGNSESAMIALLCLFGGISIASW
NALDVLTVELYPSDKRCTAFGFLNALCKLAAVLGISIFTSFVGITKAVPILFASGALAAG
SFLAFKLPETRGQVLQ
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgactatggacgagacggacggcaggacttcatccgcggcgccaaagacatc
gccaaggtggtgaagaagcaggcgggcaagaaggtgggccgcagtgtggacaaaatggcc
gacgagtacaccaagcgctcgtacaagcgcttcgaggaagaggacgacgatgacgactac
cccgtgcagcagagccaagatggcgacggctactaccgcaacgacagccgggccaacgac
gacgagggcggccacagcgactccacggaaggtcacgacgaagacgatgagatctacgag
ggcgagtatcagggaatcccccgggcagagtccggaaaaacggtaccggtggacgggatt
gccccccaagctcagatcagggacctggcccagttcgaggcagagaggaggaaggatcag
gaggagttggcccagcagtacgagaccatcctacaggagtgtggccatgggaagttccag
tggacgctgtactttgttctggggctggcgctgatggcggacggtgtggagatcttcgtg
gtgggctttgtgctgcccagcgcagagaaggacatgtgtctgtcagaggaaagcaagggc
atgttgggtcttattgtgtacctggggatgatggtgggggccttcctgtggggcggcctg
gccgaccggatcgggcggcgacagaccctcctcatttctctctccatcaacagtgtgttt
gccttcttctcctccttcgttcaaggatacagctccttcctcttatgccgtctgctctcc
ggcgtgggcatcggtggctccatccccatcgtgttctcctactactccgagttcctggcc
caggagaagagaggagagcacctcagctggctctgcatgttctggatgatcggtggcatc
tacgcctctgccatggcctgggccataatcccccactatggctggagtttccagatgggc
tctgcgtaccagttccacagctggcgtgtgtttgtgttagtgtgtgccttcccctctgtg
gcagccatctctgccctcaccacaatgcccgagagcccacgcttcttcctggagaatggg
aaacacgatgaggcttggatgattctgaagcaggtccatgacaccaacatgagggcgaag
ggctacccagagagggtcttctctgtgaccaccatcaagacagttaagcagatggatgag
ctggtggacatgggagagggcaccgcctggcaccagaggtggaggatgaagctggctgac
ctgttcaaccaggtgtggagcaacttcctggccatattctctcccgagtaccgtcgcacc
actctcatgatgatggctgtgtggttctctatgtcgttcagttactatgggctgacagtg
tggttccctgacatgatcaagtatctccagaagcaggagtactcctcgcgcaccaaggtc
ttcatcaaggagaaggtggagcacgtcaccttcaacttcaccctggagaaccaggtgcac
cgcaacggagagtacttcaacaacaagtttatgaatctgaaaatgaagtccatggtgttc
gaggattctctgtttgaggagtgctactttgaagacatcacctccagcaacaccttcttc
aagaactgcacctttattgctaccctcttctacaacacagatctgttcaaatacaggctg
atcaacagcaaactggtcaacagcaccttcctgcacaacaaggagggctgcatgcttagc
gacttcagcgacgagaacagtgcctacatgatttactttgtcagcttcctgggcacattg
gccgtgttgcctggcaacattgtgtcggcgctgctcatggacaagattggacggctgagg
atgttggcgggctccagtgtgatctcttgtgtcagctgtttcttcctgtcgttcggcaac
agcgagtcggccatgatcgctctgctctgtctgttcgggggcatcagcatcgcctcctgg
aatgccctggacgtgctgacggtggagctctacccctctgacaagagatgcacagcgttt
ggctttctaaacgccctctgtaagctggcagccgtgttgggcatcagcatcttcacctct
ttcgtgggcattaccaaggctgtgcccatcctgtttgcctccggggcgcttgcagcgggc
agcttcctggcgttcaagctgccggagacacggggccaggtgctgcaataa
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