Oncorhynchus kisutch (coho salmon): 109887340
Help
Entry
109887340 CDS
T09179
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04020
Calcium signaling pathway
oki04080
Neuroactive ligand-receptor interaction
oki04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109887340
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109887340
04082 Neuroactive ligand signaling
109887340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109887340
Ion channels [BR:
oki04040
]
Ligand-gated channels
Glutamate (ionotropic)
109887340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
109887340
NCBI-ProteinID:
XP_031693970
LinkDB
All DBs
Position
LG13:complement(73693185..73822881)
Genome browser
AA seq
1865 aa
AA seq
DB search
MVAIPTLSLLLALAEWAGLVTPSPHLLLRPRERERDPGTVMNFNIAVIHAGASVQVEAAA
GPGGRVLYPGFGRAHSSLGESVITQWGSANVIWLQVNDSSPKTLLSQLCDLLSARPLQGL
VYEEERPPPTAWGPLAPMLEFVSAQTGLPIVAVGGGAGLGRMQQVRLLYCSQEEAELVFK
AAWAAGQAGPSHMWFAVGPALSGLGMEGLPRALFAVRPQGWKDKPRMRIARGVSILTHGA
VALRRDYGASGGPNFVTNCMTESNQTHRVRGRMRYFSNITLGGRDYSFDSDGYLANPVLE
VISYTPGKGWEDVGMWENGKLDLVYPAWSRYGPFLQPPDGAQHLRVVTLEERPFVIVELA
DAASNTCIRDSVPCRRPLNASIPVQDPPKKQCCKGFCIDILKRLAKIVGFTYDLYLVTNG
KHGKKIDGVWNGMIGEVVGQRADMAIGSLTINEERSEVVDFSVPFVETGISVMVSRSNGT
VSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEFFSPVGYNRSLSSGKKAGGSTFTIGK
SVWLLWAIVFNNSVPVENPRGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEEYIDTVS
GLSDKKFQHPTEQYPPLKFGTVPNGSTEKNIRSNYPGMHHYMVKYNQRGVEDAINNLKTG
KLDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALLQLV
GDDEIEMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYW
RLRHCMATSSGRLDFLLAISRGMYSCCSFEDETTPGGAKSSMAMLPHHHGTMVTVPPPPH
LVSASSTNPALTMAQQQQQQQSQPVYKTQLPGSPPTVVHSGTALGPSNTPMLGAPLPCST
FLPRPDRRLAVVDRWRLPKAGTATNPMAVRGTVADMGPFPQKVAPTWGTTAGGVGVGGGG
GLDGYKRYYGPIDPEGLGPCMDQPTGSQTPKTAPRSHPQPPPATVAFYSEKGPDQGVGKR
VVGGGGTGCQGKGGVKPLGTPRLPPKSQAVGVTPVPLPTNPPLPQPSPPLPSSFWRKRRP
KKPKEPGGPLYENILPLGRRGGGRDGARDGGGRRGRPLSPPLPLPVTVPMSPTYTPPSPS
TSLPYTSSTSSSSSNTSSTSSSTSSSRSSSPSSSSSLTSQSTREGLDAEDDDEDEELTEE
SSLLLGRGRDRQRSIISSRSLSHGRQPPPIPPRKPRPARGERDRERERGGSQLAQLQEWW
AGWGERERDRSGGVGNDERKREKKRRKDKEKKKKKKKRKKREERERERDKERKRRKVKKK
RKKKALKTKKKSTGRSEQEEGDVEADREGIGDGGREGGMPDYSSFPTQYRSTFGEKGRDS
AWAGERERGRREGEEEEGGDREEDSSRSRERRPKSSRSHSRHRPPSKRYPKLPASVKFWV
SGGNGEGGDPNSGTPPSSLPPLIPLSKRRRSGGVERREGGREGEKRPLLMHYEKGRANTQ
EGLSFHEWDSEEDDEEDVGEERQRDRARERVEERVRRAGGRGAVSESERDRARTEESYSD
EGSSGEFGRFERYWEGREGAGGPGSSGIGGIGGGSWFFGTYPSREKGGSINSRDDSILGR
VEGWGGAGGDSWGSGPGVGWASGGGSGGLGSQWPPPPANLPHPRRYWSVDKLPMKGEKKW
KRGGRGKGKGRARDRNQGSGVSCSCSQYPHPHVHPHPQGRSHGHGKRGSTALSHSQEELL
PHCHSFSGGSRPKPPPKPDQGQAKSGSQASLSTQQPGVLVDHPPQPSLSPPQPQPSAPSS
SSSLPVPIPPPPSSSSASASAKLLYQRLRSVPQPGRFYSPHLPLKAKSLCSRRGSAHFSS
LESEV
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcaatacccaccctctctctcctattggccctggcggagtgggcaggactggtc
acgccctccccacacctcttgctccgcccccgggagcgggagagagacccggggactgta
atgaacttcaacatcgctgtgatccacgcgggggccagcgtgcaggtagaggcggcggcc
gggcccgggggaagggtgctctaccctgggtttggtcgggcacacagctccctgggggag
agcgtgatcacccagtggggctctgcaaacgtcatctggctccaggtgaatgacagtagt
cctaagactctgctgtcccagctgtgtgacctgctgtcagcgaggcccctacagggcctg
gtctacgaggaggagaggccaccacccaccgcctggggacccctggcccccatgttagag
tttgtctctgctcagactggactacccatagtggctgtaggaggaggagcagggctgggg
aggatgcaacaggtacgtctgctctactgttcccaggaggaggccgagctggtgtttaaa
gcagcctgggccgcgggtcaggctggtccctctcacatgtggttcgctgtggggccagcc
ctgtccggccttggcatggagggtctccccagggccctgttcgccgtgcgtccgcagggc
tggaaggacaagccccgcatgaggatcgcccggggcgtgtccatactgacccacggggcg
gtggcactgcgccgtgactatggggcctctggagggccaaactttgtcaccaactgcatg
acggaatccaatcaaacacacagggtgcgggggaggatgaggtatttcagcaacatcacg
ttgggtggcagagactactctttcgacagtgacggttacctggccaaccccgtcctagaa
gtcatctcctatacacctggcaaaggctgggaggatgtagggatgtgggagaacggtaag
ttggatttggtttatccagcgtggtcgcgttacggtccattcctccaaccgcctgatggc
gcccagcacctgcgcgtggtcactctggaggaacgtccgtttgtcatcgtggagctggct
gacgccgcctccaacacctgcatcagagactctgtaccctgccgacgacccctgaacgcc
agtattcctgtccaggatcccccaaagaaacagtgctgtaagggcttctgcatcgacatc
ctcaaacgattggctaagatcgtgggtttcacctatgacctctacctggtgaccaatgga
aagcacgggaagaagattgatggagtgtggaacggcatgattggagaggtggtgggacag
cgagcagatatggccatcggatccctcaccatcaacgaggagaggtcagaggtcgtggac
ttctctgtccccttcgtggagacgggcatcagtgtcatggtctcccgtagcaatggaacc
gtctcaccctctgccttcctggagccctacagtccagcggtgtgggtgatgatgttcgtc
atgtgcctgaccgtggtggctgtgaccgtcttcatatttgagttcttcagtccagtcggc
tacaaccgcagcctttccagcggaaagaaggcaggaggctctacgttcaccataggaaag
tctgtgtggttgctgtgggccattgtgttcaataactcggtcccagtagagaaccccaga
ggaaccaccagtaagatcatggtgctgatctgggccttcttcgctgtcatcttcctggct
tcctacacagccaacctggctgccttcatgatccaggaggagtacatagacactgtctct
ggactctcagacaaaaagttccagcaccccacagagcagtacccccctctgaagtttggc
acggtgcccaatggaagtacagagaagaacatccgcagtaactaccctggcatgcaccat
tacatggtcaaatataaccagagaggggtggaggacgccattaacaacctcaagactggg
aagttggatgcctttatctacgatgcagctgtgttgaactacatggccaggaaagacgag
ggttgtaaggtgatgaccataggctctgggaaggtatttgccaccacaggctacggtatc
gccctgcacaagaactcccgctggaaacgccccctcgacctggccctgctgcagctggtg
ggagacgatgagattgagatgctggagcgtctgtggctgtctggtatctgtcacaatgat
aagattgaggtgatgagcagtaagctggacatagacaacatggcgggtgtcttctacatg
ctgctggtggctatggggctcagtctgctggtatttgcctgggagcacctggtctactgg
aggctcagacactgcatggctaccagctccgggagactggacttcctactggccatcagt
aggggcatgtacagttgttgtagctttgaggatgaaaccacgccgggcggggccaaatcc
tccatggctatgctcccccaccatcatggcaccatggtaacagtcccgcccccgccacac
ttggttagtgcgtcatcaaccaacccggccctgaccatggcgcagcagcaacagcagcaa
cagtcacagcccgtctacaaaacacaactacctggatcccctcccactgtggtgcattct
gggacggcgctggggccctccaacactcccatgctgggggcgcccctgccctgctccaca
ttcctcccccggcccgatcgcagactggccgtggtggaccgctggaggctgcccaaggct
gggaccgccaccaaccccatggccgtgcgcgggaccgtcgcagacatgggacccttcccc
cagaaggtggctccgacctggggcacgacagctggaggagtgggagttggtggtggtggg
gggctggatggatataaacgctactatggacccatcgaccctgagggtctggggccctgt
atggaccagccgacagggtcccagacccccaaaacagcccccaggagccaccctcaaccc
cctcccgccactgtggccttctactcagagaaaggtcctgatcagggggtggggaagagg
gtggtgggaggtggtggtactgggtgtcaggggaagggaggggtcaaacctttggggacg
cctcggctccctcctaaaagccaagccgtgggcgtgaccccagtccctctgcccactaac
cccccgctgccacaaccctccccccctctcccctcatccttttggaggaagcgccggccc
aagaagcccaaagagccaggcgggcctctgtacgagaacatcctaccgctggggcgcagg
ggaggaggaagggatggagctagggatggtggagggaggaggggacgccccctctctcct
cctctcccactccccgtaaccgtgcccatgtcccccacctacactcccccttccccctcc
acctcactcccctacaccagctcaacatcctcctcttcctctaacacatcgtctacctct
tcctctacctcctcctctcgctcctcctctccttcctcctcctcctccttgacctctcag
agcacgcgggaaggtttggacgcagaggacgatgatgaggatgaggagctgaccgaggag
tccagtcttctcctggggagggggagggacagacagcgttcaattatctcctctcgctct
ctcagtcacgggcgccagccaccacctataccaccccgaaaaccacgccctgcccgaggg
gagagagacagggagagggagagaggaggtagccagttggcccagttacaggagtggtgg
gcgggctggggtgagagagagagggatcgcagtggaggagtaggaaatgacgagaggaaa
cgagagaagaagaggaggaaagataaagagaagaagaaaaagaagaagaagaggaaaaag
agggaggagagagaacgagagagagacaaagagaggaagagacggaaggtgaaaaagaag
aggaagaagaaggcgctgaagacgaagaagaaatcgactgggcgttctgagcaagaagag
ggtgatgtggaggcagatagggagggaataggggatggagggagagaaggagggatgcca
gactactcttcctttccaacccagtatcgtagtacgtttggggagaaagggagagattca
gcatgggcaggagagagggagcgaggaaggagggagggagaagaggaagaggggggtgat
agagaggaggatagcagcaggagcagggagaggcggcccaaatcatcccgttcccactcc
agacatcgaccccccagtaagcgctaccccaaactccccgcctcggtcaagttctgggtg
agtggaggaaacggggaagggggggaccccaactctggaacacccccctcctccctccct
cccctcatcccactctccaagaggaggaggagtggaggggtggagagaagggagggaggg
agagaaggagagaagaggcctctgttgatgcactatgagaaaggcagggctaacacccag
gaggggctctccttccatgagtgggactctgaggaggatgatgaggaagatgtgggggag
gagaggcagagagacagagcgagggaacgggtggaggagagggtgaggagggcgggtggg
agaggtgctgtgtcagagtcagaaagagacagggcaagaacagaggagagttactctgat
gagggctcatcaggggagtttgggcgatttgagaggtactgggaggggagggagggggct
ggaggaccagggagtagtgggataggggggatagggggagggagctggtttttcggaaca
tacccctccagagagaaagggggcagcatcaacagcagagacgactctatactagggcga
gtggagggctgggggggggcggggggagattcttggggttcggggccaggagtagggtgg
gcgtcagggggagggagtggaggtctggggtcccagtggcccccccctccagcaaacctc
ccgcacccccgacggtactggtctgtcgacaaactcccaatgaagggagagaagaagtgg
aaaaggggaggaagggggaagggcaagggacgcgcacgagacagaaaccaggggtctggg
gtgtcatgttcatgtagtcagtacccccacccccatgtgcacccgcacccccaagggcgg
tcacacggccatgggaagagaggaagcacggccctgtcccacagccaggaggagttgctc
ccccactgccacagcttcagcgggggctcacggcccaaaccccctcccaaaccagaccag
ggccaggccaagtcaggcagccaggccagcctcagcacacagcagccaggagtgttagtg
gatcacccccctcagccctccctctcaccccctcaaccccaacctagtgccccttcctca
tcctcctccctgccggtgcccatccctcctcctccctcctcgtcctctgcctcggccagt
gctaagctcctgtaccagagactacggtcagtacctcagcccggacgcttctactccccc
cacctgccactcaaggccaagagcctatgctcccgacgaggctccgcccatttctccagc
ctggagagcgaggtatga
DBGET
integrated database retrieval system
