Oncorhynchus kisutch (coho salmon): 109887461
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Entry
109887461 CDS
T09179
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109887461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109887461
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109887461
mRNA degradation factors
5'-3' decay
Decapping complex
109887461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
109887461
NCBI-ProteinID:
XP_031674974
Ensembl:
ENSOKIG00005041773
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MTASSSGGNTCLTAKGLDISLAALQRQDPYINNIVDVASQVALYTFNNRSNEWEKTDVEG
TLFVYTRLASPRHGFTIMNRLSMENLTEPITKDLDFQLQDPFLLYRNARLAIYGIWFYDK
ADCQRIAELMKYLTKQEQALAQRGQQGQGGLVSPRALEAAGDPGKGQGVDILQMLTKARN
EYDKGGQPEPKEIGGCSVLNANPSLIKPIPVKPMESYPQPGLQERPVQDGRGEPRPLSLA
TLFGVQQPRAELVSPMAGSGGPGSQPQGKPGGVRPAVARSLSYDDPVQAQLRLQAQEGGL
ISGSSPPQHCPAFQKLMKDAASSSQPQKQLQRGGPMEQLQPVSESPENRLHENGAPSVLH
HQTQARQDPIQRLFQNQPTSTTPSMTTSAPCCPRPPPLIPGLQSARPQPLLVDALGFPGS
QHHHLPPHQARPLYFSPTKPPQMLVPMLPSHPSQPQPPHQPQPGHPQSQPCHPFHPFQHP
QPLYLQPLPGHPQPGQLTGVVSPHELLQRLQLVQQEQSLVPEPTRTSSNLAPRFHEPAPL
APSAPPAMGQHGQQSAHSTARSLDSLADKNSAGTAAQKFQVISPQRIPATVAPTLLLSPS
VFSQAKRPQAQASGDTHCPPGPHPPSALLAPQAPDDPQPRGLSKSQLQATLLHLIQNDSS
FLDTIYESYAHRFSTDATANKF
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaagctcatcgggtggaaacacctgtctcactgctaaaggtttggacattagt
ctcgcagccctgcaaagacaagatccttacatcaacaacattgtagatgtggcgagtcaa
gtggcgttgtatactttcaacaaccgatcaaatgaatgggagaagactgacgtggagggg
accctgtttgtctatacaaggctagcatctcccagacatggcttcaccataatgaacagg
ctgagtatggagaacctgactgaacccatcactaaagacctggacttccagctgcaggat
ccgttcctgctctacaggaatgctcgcttagctatctatggcatctggttctatgataag
gcggactgccagcgcatcgcagagcttatgaagtatctgacgaaacaggaacaggccctg
gcccagcggggtcaacagggtcaggggggcttggtgtctcctcgagccctggaggcagca
ggggaccctgggaagggacaaggtgtggacatcctgcagatgctgaccaaagcacgcaat
gagtatgacaagggtggccaaccagagcctaaagagataggagggtgtagtgtccttaat
gccaaccccagcctgatcaaacctatccctgtcaaacctatggagagttatccccagcct
gggctacaggagaggcctgttcaggatggtcgaggagagcccaggcctctctctctggcc
actctgtttggtgtccagcagcccagagcagagctggtctctcccatggctgggtcagga
ggtccagggtcccagccccaggggaagcctggaggtgtccgcccggcggtggcccgctcc
ctgtcctacgacgacccagtccaggcccagctccgtctccaggcccaggaagggggtctg
atctcaggtagcagccccccgcagcactgccctgccttccagaagctcatgaaggatgcc
gcctcctcctcccagcctcagaagcagctccagagaggaggtcctatggagcagctccaa
cccgtctccgagtcacccgagaacagactgcatgagaacggagccccctctgtcctccac
catcagacccaagccagacaagaccccatccagagactgttccagaaccagcccacttcc
accaccccttcaatgaccacctccgctccctgttgtcctcgtcctcctcctctcatccct
ggtctccagtctgcccgtcctcagcctctcctggtggatgctttgggcttccctggttct
caacatcatcacctccctcctcaccaggcccggccgttgtacttcagccccaccaagccc
ccccagatgctggtccccatgttgccctcacacccctcccagcctcaacctccccaccaa
ccccagcctggtcatcctcagtcacagccctgtcaccctttccaccccttccagcacccc
cagcccttatacctccaacccctgccaggtcatccccagccggggcagctaaccggtgtc
gtctccccccatgagctgctccagaggctgcagctggttcaacaggagcagagtctggtc
ccggagcccactaggacttcctctaacctggctcctcgcttccacgagccagcccctcta
gccccctcagcccccccagccatggggcagcacggccagcagtcggctcattctacagcc
aggtctctggacagtttggctgacaagaactctgcaggcaccgctgctcagaagttccag
gtgatctccccccagcgtatcccagccacggtggcacctaccctgctcctgtcccccagt
gtcttctcccaggccaagcgcccccaggcccaagcctctggggacacccactgcccccct
ggccctcatcctccctcagccctcctggccccacaggccccggacgacccccaacccagg
ggcctctctaagagccagctccaggccaccctgctgcacctcatacagaacgacagttcc
ttcctggataccatctatgagtcctacgcccaccgcttctccacggacgccaccgcgaac
aagttctga
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