Oncorhynchus kisutch (coho salmon): 109887474
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Entry
109887474 CDS
T09179
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109887474
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
109887474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
109887474
NCBI-ProteinID:
XP_020362649
Ensembl:
ENSOKIG00005008248
UniProt:
A0A8C7DH41
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All DBs
Position
LG17:complement(9447463..9460078)
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AA seq
697 aa
AA seq
DB search
MKIGAISMLSPVKDVLPWKEFSHAARLSPTEPHDTVGWLSTLPALHSHHPPCPICERMHP
SGTHCSAPEESGKTSTEPGEAQLDFYLKLGYSPAQVWTVLQKFGLNTDTNRVLGELVRTG
ASLEGLEKEQEKEGAPSFLVDRGETLSNLPLTPPPSRGDVPSEEGDALRPIVIDGSNVAM
SHGNKEMFSCLGIQLAVNFFLDRGHTDITVFVPSWRKEQPRPDVLITDQHILRELERKKI
VVFTPSRRVAGKRVVCYDDRFIVKLAHETAGIIVSNDTYRDLQGERQDWKRFIEERLLMY
SFVNDKFMPPDDPLGRHGPTLENFLRKVPRLPRKQPCPYGRKCTYGMKCKFYHPERANQS
RCSLADELRKKAKLSLSEQKHPTAGAGPAYGLSLEEGMAQKLPLEQRNGSLKKGHISENV
LLIKGSHRSSQRSPTKKDKTNRHLTNLDTAMPSGSQSPTDLDSALPSGSQERLDSGLGSF
ESQVSDPSRDHCDRYGNAGFRNCLSPPSMRQQIYSLPSNLPSSCSSHPPQPLLGPSTGYQ
QHRSRGPASTHNNTHSPHHSMGPASTYHPGKITYSPTYYLSYGAPIYPVGKHQYRYPNDF
QQENRAHPPQQTYWSDPFGTYPQTLHSTDQMEKQRHWLLPQTHPHPHGESREREEVRKKL
LAIFNGRLVDKVMDMFPQLMDPQRLAAEILILQSPGL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaagattggtgctatctcaatgctgagcccggtcaaagatgtcttaccatggaaagag
ttctcccacgcagcccgtctgagccccacagagccccacgacacagtcggatggctgtcc
actctgcctgcccttcacagtcatcatccaccctgtcccatctgcgagagaatgcaccct
agtggtacccactgctctgccccggaggagagcggcaagacctccacagaacctggagag
gctcagttggacttctaccttaaactgggctactccccagcgcaggtctggaccgtgttg
cagaagtttggcctgaacacagacactaacagggttctgggggagctggtgcggacggga
gccagtctagaagggcttgagaaggagcaggagaaggagggagccccgtctttcctggtg
gaccgaggggagaccctcagtaacctgcccctcacccctccacccagccggggcgatgta
cccagtgaggagggagatgccctgagacccatagtgatcgatgggagcaacgtggctatg
agccacgggaacaaggaaatgttttcctgcctgggaatccaactggcggtaaacttcttc
ctggacagaggtcatacggacatcactgtgtttgttccctcatggaggaaggagcagcct
agaccagatgtcctcatcacagatcaacacattttgcgtgagctggagaggaagaagatc
gtggtgttcaccccttcgcggcgtgtagcgggcaaacgtgtggtctgctatgacgatcgc
ttcatcgtcaagctggcgcatgagaccgccggcatcatcgtgtccaacgacacctaccgt
gaccttcagggcgagagacaggactggaagcgcttcattgaggagaggctactcatgtac
tccttcgtcaatgacaagttcatgccccctgatgaccctctgggtcgtcatggtcccacc
ctggagaactttctacggaaggttcctcgtttgccacggaaacagccgtgcccttatgga
aggaaatgcacttatgggatgaagtgtaaattctaccacccggaacgagccaaccaatcc
cgttgctctctggctgacgagctgcggaagaaggccaaactatctttatcagaacaaaaa
caccccactgcaggtgctggacctgcctatggcctttctctggaggaggggatggctcag
aaactgcctctagaacagaggaatggctccctgaagaaaggccacatcagtgagaatgtg
cttctgatcaagggaagccatcgttccagccagaggtccccaactaagaaggacaagacc
aaccgacacttgaccaatctggacacggccatgcccagtggctctcaatccccgacagac
ctggactcggccctgcccagtggctctcaggagcgactagattctggtctgggctccttc
gagagccaggtgtctgacccctccagggaccactgtgaccgttatgggaatgctgggttc
aggaactgcctgtccccccccagtatgagacaacaaatctattccctgcctagcaacctg
ccttctagctgcagctctcatcctcctcagcctttactgggccccagcacaggataccaa
caacatcgcagcaggggcccagccagcacccacaacaacacccacagcccacatcacagc
atgggcccagccagcacctaccacccaggcaagataacctacagccccacctattacctc
agctatggggcaccgatatatccagttgggaagcatcagtacaggtatcccaatgacttc
caacaggagaacagggcccaccctccacagcagacctactggtccgatccgttcgggact
tatcctcagactctccatagcactgatcaaatggagaagcagagacactggctcctccct
cagacacacccccacccccacggggagagcagggagagagaggaggtcaggaagaagctg
ctggctatctttaacggccgtctggtggacaaggtcatggacatgtttccccagctcatg
gacccacagagattggctgctgagatcctcatcctgcagtctccgggcctgtga
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