KEGG   Oncorhynchus kisutch (coho salmon): 109887693
Entry
109887693         CDS       T09179                                 
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    109887693
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oki01009]
    109887693
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oki04515]
    109887693
Protein phosphatases and associated proteins [BR:oki01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109887693
Cell adhesion molecules [BR:oki04515]
 Cadherins
  Protocadherins
   109887693
SSDB
Motif
Pfam: Cadherin Ig_CLSTN Cadherin_FAT4_N Ig_Cad99C_N Cadherin_CELSR2_9th Cadherin_2 Epiregulin_C
Other DBs
NCBI-GeneID: 109887693
NCBI-ProteinID: XP_031671744
Ensembl: ENSOKIG00005049570
LinkDB
Position
Unknown
AA seq 892 aa
MFNKTGPGLSSRGVLWGLCILLLYTSPLCCFANFSQAKELVYKIKEGLPSGTLIGSMGSD
LHLDLSLDPHVLFNLPQKKPSDQYVTLNSTTGQLFTSGNEIDRETLCPDSSEYNQGCVLS
LDVFVLPQQYFQLVKVKILVEDVNDNRPRFPTGEIRVSVPENTQVNARFAVEQSATDPDL
GFHGVQTYWLVNDFGVFTLDVEENEGGELTPFLIVTDELDRERQEEYITDIIAEDGGLPP
LLGTATLRIIITDVNDNCPQFTESQVNVTLYGNTTKGKHLSRLHAFDPDQGANAVISYAY
SDRVPREARALFHLDRITGVIKLAGQINTATGKFYKLTVLANGPGCVPAVATVTVHVIRV
ASGPPVIMPRYIAAEKDGVVTMKESEPPFSPIAFFTVSNTDQRGQGTECLLEGSGPFRLT
PYKRLKNEYLLETTEPLDHEQRQDYELTVVLRNPRGLAIKTFVKILVLDENDNAPVFKQS
LYEVSVEENNPPNSFLTQLQATDQDSEARGEVIYTLGSDAPSIFLLERLTGVLTVSTSLD
REEKQTYRFMVRAVDRGTPRRESIATVVITVLDRNDNSPRFINKDFTFFVPENFPGFGEI
GVLSVTDADAGENGWVALSIVNGSDIFVIDAGRGALRARTPLDREQQGTYYLWIEAVDGG
EPSLSCLTVVTVLLLDVNDNPPVVLFPQSNQSYMLVLPSTLPGTSITEVYAVDKDTGMNA
VIAYSIIKRKGGEPGSFDIDPDTGNITLKRELSDRGLYSLLVKVSDHGQPEPLHSTVLVN
LFVNETVSNESYIQSLLTGEEAEIQMEEKQWYVGKLTERPGREDLFPCQPLLIALSVTCL
GLFCIAVTLTAYICCKKLKKWRKCQMKRLEVEMPLKVNGDDADRKRTEISNI
NT seq 2679 nt   +upstreamnt  +downstreamnt
atgttcaacaaaacaggacccggacttagctcgagaggagtactgtggggtttgtgtata
ctcctcctttacaccagccccctctgctgttttgctaatttcagccaagccaaagagctg
gtctataagataaaagaaggattaccgtcggggacactcatcgggtccatgggctccgac
ttacacttggatttatccctcgatccccatgttttattcaatctgccccagaagaagccc
agtgatcagtatgtcactctgaacagcactacgggacagctgtttacgtctgggaatgag
atcgacagggagacgctctgccccgactcctcggagtacaaccagggctgcgtcctctcc
ctggatgtgttcgttctaccccagcagtatttccagctggttaaggtcaaaatcttggtt
gaggatgttaacgataatcgtccgcgcttcccgacgggcgagattagggtttccgtcccg
gagaacacccaggtcaacgcgaggttcgcggtggagcagtcagcgacggaccctgatctg
gggtttcacggggtccagacttactggctggtcaacgacttcggggtgttcactctggac
gtagaggagaacgaggggggtgagctgacacccttcctcatcgtgaccgacgagctggac
cgggaacgacaggaggaatacataacggatattatagcagaggacggtgggttaccacct
ctccttggcactgccacgttgaggattataatcactgatgtcaacgataactgtcctcag
ttcacagaatcacaggtcaacgtgacgctctacgggaatacgactaaaggaaagcacctg
tccaggttacacgccttcgaccccgaccagggcgccaacgccgtgatcagctatgcgtac
agcgaccgcgttccccgggaggctagagccctgttccatctggaccggattaccggggtg
atcaaactggccggtcagatcaacaccgcaaccgggaagttctacaaactcactgtcctc
gcgaacggacctggttgcgtccctgccgtcgccacggtgacggtgcacgtgatccgggta
gcttccggtccgcctgtcattatgccgcgctacattgcggcggagaaagacggcgtggtc
acgatgaaggagtccgaaccgccgttttccccaatcgcgtttttcaccgtgtcgaacacg
gaccagagaggacaagggacggaatgtctacttgaaggatccggcccgttccgactgaca
ccttacaaacggttgaagaacgagtatctgttagagacgacggagccgctggaccacgag
cagaggcaggactacgagctgaccgtagtgctcaggaaccccagaggtctcgccattaag
accttcgttaagatcctggttctggatgagaacgacaacgcgccggtcttcaaacagtct
ctgtatgaggtctctgtggaggagaataaccctcccaacagcttcctgacccagctccag
gccacagaccaggacagtgaggccagaggagaggtcatctacacgctggggtcagacgct
ccctccattttcctcctggagaggctgaccggcgtgctgaccgtgtccacatctctggac
cgagaagagaagcagacctacaggttcatggttcgggcggtggaccgagggacccccagg
agagagtctatagctacagtggtcatcactgtgctggaccgcaatgacaacagcccgcgc
ttcatcaacaaagacttcacattctttgtgccggagaatttcccgggttttggcgagatc
ggcgtcctctcggtaacggacgcggacgcaggtgagaacggctgggtggccctctccatc
gtcaacggcagcgacatctttgtgatcgacgcggggcgcggtgctctaagggcccgtacc
cctctggaccgggagcaacaggggacgtactacctctggatcgaggcagtcgacggaggg
gaaccctctctctcctgcctcaccgtggttaccgtcctcctccttgacgtaaacgataac
cctcccgtcgtcttgttcccccagtctaaccagtcctacatgctggtgttacctagcacc
ctaccagggacctccatcacagaggtttacgccgtggataaagacacaggaatgaacgcc
gttatcgcctacagcatcatcaagaggaagggtggcgagccggggtcgtttgatatcgac
ccggacacagggaacatcacgttgaagagagaactgagtgaccgcggtctctacagtcta
ctggttaaagtctcggaccacggtcaacccgaacctctccactccacggtcctggtcaac
ctcttcgtcaacgagacggtttctaacgagagctacatccagagtcttctcaccggggag
gaggctgagatccagatggaggagaagcagtggtacgtgggtaaactgacagagaggccc
ggcagggaggacttgttcccctgtcagccgctactcatagctctgtcagtgacctgtctg
ggactgttctgcatcgccgtcacattgactgcttatatatgctgcaagaaactgaagaaa
tggaggaaatgccaaatgaaaagactagaggttgaaatgcctttgaaggtgaacggtgac
gacgcagatagaaagcggacggaaatctcaaacatttga

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