KEGG   Oncorhynchus kisutch (coho salmon): 109887872
Entry
109887872         CDS       T09179                                 
Name
(RefSeq) ras-related protein Rab-40C-like
  KO
K07928  Ras-related protein Rab-40
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oki04121]
    109887872
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:oki04031]
    109887872
Ubiquitin system [BR:oki04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Target recognizing subunit
     109887872
GTP-binding proteins [BR:oki04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab40
    109887872
SSDB
Motif
Pfam: Ras Roc SOCS_box Arf
Other DBs
NCBI-GeneID: 109887872
NCBI-ProteinID: XP_031655320
Ensembl: ENSOKIG00005027801
LinkDB
Position
LG20:48851442..48859132
AA seq 293 aa
MRGMMATQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYPYSSGIDYKTTTI
LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDGIDRWIREIDEHA
PGVPRILVGNRLHLAYKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLM
RHGMEKFWRPNRVFSLQDLCCRSIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMM
HGRSYSVATNAAGGGVSGNNSSSKGNRLKRSKSFKPPSRPPKTSSSKSNCNIT
NT seq 882 nt   +upstreamnt  +downstreamnt
atgcgtgggatgatggctacacagggcagccctgtcaagagttacgactacctcctgaaa
ttcttgctggttggagacagtgatgtggggaaaggagagatcctagacagtctgcaggac
ggatcagcagagtctccctatccctacagcagtgggattgactacaagactaccacaatc
ctgttggatgggagaagagtcaagttagagttgtgggatacgtctggacagggtcgattc
tgcacaatcttccggtcatattcacgtggggcacagggaatcctgctagtttatgatatc
acaaatggctggtcgtttgatggcattgaccgctggatccgggagatcgatgagcatgct
ccgggggtgccccgcatcctagttggcaaccggctccacctggcctataagaggcaggtg
cccacggagcaggcccgcgcctacgccgagaagaatggcatgaccttctttgaggtcagc
cctctgtgcaacttcaacgtcatcgagtcgttcacggagctgtcgcgcatcgtgctgatg
aggcacggcatggagaagttctggagaccaaatcgagtgttcagcctccaggacctgtgt
tgccgctccatcgtctcatgcacccccgtccacctcattgacaagctgcctctcccggtg
gccatcaagtcccacctcaagtccttctccatggccaacggaatgaatgctgtcatgatg
catggacgctcctactccgtggccaccaatgcggcgggcggcggcgtgagcggcaacaac
agcagcagcaagggaaaccgtctcaaacgctccaagtcctttaaaccgccatcgagaccc
cccaagactagtagcagcaaaagtaactgtaacatcacctag

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