Oncorhynchus kisutch (coho salmon): 109887890
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Entry
109887890 CDS
T09179
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109887890 (zc3h13)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
109887890 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
109887890
NCBI-ProteinID:
XP_031669086
LinkDB
All DBs
Position
Unknown
AA seq
2189 aa
AA seq
DB search
MSKIRRRVTVENSKTISDSSSSQTTTTPSRRPSVFERLGPSTGSNAVEVCTSTPASNPLT
DTTHACPEKTNCRNWLKTGNCSYGNTCRYTHGTQPRGKGFSGSFSRSAERPTGDLRERMK
NKRQDVESDATKRDPEEPTSPTARQRDSSRGRHREKEDIKITKERSPASEEETTEWEANR
EDSDNGDYDYELSLEMKRQKIQRELMKLEQENMEKREEIVIKKEVPEPTTKTRTTIISKT
SPERSSSKGSPSSRKSSGSPKHTKGPKASGSRKKEKKTSVSSSASATARSSKGGHGKKKG
PRTPSPPPPVLPLVNPVVAAGGKKHKGKHKNKEKCEEKPPKEGKERGRDVEKHKEKKEKR
RDRSDSSHKAKRSVMSEERSGSVSSLSRDREASPSARKNKSTSPKVASQKTLAPASPPHR
SPPPRHKRTPTPPRHHSPSSHSGSSAQRHSPSPRRRRSASPAYNRDPPAASSPPGQRCSS
RSPAASRDTSSPQRRTSPGGRNHSRGRERGRSERGRSPPAQENRHERRDESRGKREKDGT
RDDRDYEVAETSSSRDAAREDRETKEGRERRGDGRSDRRGDSTSTSRDPTRDRDRDTKDS
TREPRTTETTSTRSGRDPLEYRDREREREREKEKERERERGEREKTDRKEEAVPEEGRGY
GRGHGREEGGRTEGRGETRTESRAERPGRGRGREADASDKGSTRNARGSQLESGGHDGWE
SRSGGGFREKSAERSTDRGAERGGAERGGGAERGGVDRGGAERDRYDGDRRGGEQATGRD
SSYDRRGGHTDRGDRRENRERDQRASSPGRHPARGEEPDREETRGRDERRGEEKGGDRRE
DRAREREREREREREKEREREKEKEREAERERVREREREREREREKEREREKEKEREKER
EREREREEREREREERDRERKEREREREREREREREQRERERQREWEEREKGRDERRERT
RDEPRDDRSVRDSHEDRKTSRKRHRVETTPSPTRPSPKRARDATPGDGEEYNSPEEKSER
LIGGGQPKVRPTSGSGPITILPVTVPVCPPPPVLDSVEKHRLLSQVVLPPQDPLLRSPPS
TSVAEDAKPSRWKDEERRGGGDKREGRSRRNEEADARGDRGGAGRGGERRGEHPSDSSTP
VSASGSDSRRGKERDGREPTPPPPPVALVTEDRDAPVPAGHEEGKKKTKSQKKGLKKGRK
EEAVAGGVSGAPERFTNPEPPSSMALSDGPPPPLLSPRKAPKKKALDKKRKRSRGAESDA
SEEEPGSSHLPPGKRNKRGPRTPPPAPKEALLSQRAMPHSVAEPLPQPVKMDANFSDWSD
EDVLERGGGSAPVKAPPTVPTERTPTEALPRRGGPRGGKERLERPVPLPIAPLLSQDPPM
LLQTLPPQPLMSQPLLRKHPPEQKRSSSMGSNQSRASSRRLRSPSNESAHREDPQQGQGP
GRPRRGHQLQGANSRDRERERERERERDRERERERGERERGPVLTEPPVVRGEERKSRID
QLRRGEPSRSTSSDRQDSRSHSSRRSSPESERQVQSRAGSYDGREREREREREREQFERE
RERKDLRQQQGPPGPLPPLQQQGQQRDWEPEGPREWGGRGREPLLMRGGNRERDLRDMRG
ERERLLPEGLLQQHERERERERGGNRGIGRGGDHGNDRERERILLMDLPPHGDPKNRMDM
RGDRPDMRGDRPDMRGDRPDMRGDRPDMRGDRPDLRGDMRGDMRPDMRGDIRGDMRGDMR
GDIRGDMRPDMRGDIRGDMRPDMRGDMRPDIRGDIRGDMRPDMRGDMRPDIRGDIRGDMR
PDMRGDIRGDMRPDMRGDMRPDIRGDIRGDMRGDIRGDMRPEIRGDIRGDMRPDIRGDIR
GDMRPDIRGDIRGDMRGGPDIRPDIRPDHMRPDIRGPDRAEFSLLLPHEALGHGGMDQDK
AGNSHHPVGGQIQEAEKQDSVADEDDAKADDAVSVVSGGEEYEPISDDELDEILADSAQK
REDGQEEEKTPGPLDVIDVDWSSLMPKQKQEPRAAGAALLRFTPGAVLLRAGVSKRLAGP
ELLERVREVCKKELDDPKDADKLFEHDLGALNKAALNRKIERAGLLRNLGPCCKALCARR
DMAIRRQLLKNEKGLAKQMYPSVPVVDSELFQLSMRLFKKTVAAARSNQPPLGPPAGPEK
ADKGPPGLVPAASPVAKPSTPQPPEMCVS
NT seq
6570 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagataaggcggagggtaacagtggagaattctaaaaccatatctgacagcagc
agtagccagaccaccaccaccccgtctcgccggcccagcgtgtttgaaagacttggcccc
agcactggtagtaatgctgtcgaggtgtgtacctctacacctgcatctaacccactgaca
gatacaacacatgcatgtccagagaagactaattgtagaaattggttgaagactgggaat
tgcagttacggcaatacttgtcgctacacacatggaactcagccacgaggcaaaggattt
agtggatcttttagcaggtcagcggagagaccaactggcgatctgcgagagaggatgaag
aataagaggcaggatgttgaatcagatgctacaaagagagacccagaggagcctacgtcc
cccacagccagacagcgagactcgtcccgaggccgccacagggagaaggaagatataaaa
atcactaaagagagaagccctgccagcgaagaagagaccaccgagtgggaagccaaccgc
gaagactcggataacggcgactacgactacgaattatccctagagatgaagagacagaag
attcagcgggagctcatgaagttggagcaggagaatatggagaaaagagaggagattgtt
atcaagaaagaggtaccggagccgaccaccaaaactaggaccactatcatatcaaagaca
tccccggagcgttccagctcgaaaggttccccctcctccaggaagtccagtggatctccc
aaacacactaaaggacctaaagcttccggttctaggaagaaggagaagaagacctctgtg
tcgtcctctgcatccgccacggccagatcttccaaggggggccacgggaagaagaaaggt
ccccgcacccccagcccccctcctccggtgcttccgctggtgaaccctgtcgtggcagcc
ggggggaagaaacacaaggggaagcacaagaacaaggagaagtgtgaggagaagccgccc
aaggagggaaaggagagggggagagacgtggagaaacacaaggagaagaaggagaaacgc
agagaccggtcagacagctcccacaaggccaagcggtcagtgatgtctgaggaacgatcc
ggcagcgtgtcctctctttccagagaccgagaggcgtccccgtcagccaggaagaacaag
tccacctccccaaaagtagcctcccagaagacccttgcgcctgcctccccacctcacagg
tctccccctccccgccacaagcgcacccccactccgccccgccaccactccccctcctcc
cactctggctcctcagcccagagacactctccttccccccgccgacgccgctcggcatcc
cccgcctacaaccgcgatcccccagccgcctcctcacctcctggccagaggtgttcctcc
cgctcccctgcagcctcccgggacacctcctctcctcagaggaggactagccccggagga
cgaaaccactctcgggggcgtgagagaggacgcagcgagagggggaggagcccacctgcc
caggagaaccgacacgagcgtcgagacgagagccgcgggaagcgagagaaagacggtacc
cgtgacgaccgggactacgaggtggcagagacgagctcttctcgtgatgccgcccgtgag
gaccgggagacaaaagaggggcgagagcgccggggtgacgggcgcagcgaccgacgagga
gactccaccagtacctccagggaccccaccagggatagagaccgggacaccaaggactcg
acccgggaacccagaaccacagagaccacgtcaacacgctccggacgagaccctctggag
tacagggaccgagaacgggagagggagcgagaaaaggagaaagagagggagcgggagaga
ggagagagggagaagacggacaggaaggaggaggctgtcccggaggaggggaggggctat
gggaggggccacgggcgagaggaaggagggaggactgaagggaggggggagacgaggaca
gagagtagagctgagagacctggcaggggtaggggccgcgaggctgacgcatctgacaaa
ggctccacccggaatgcccgaggctcccagctggagagcggtggtcatgacggctgggag
tcacgtagcggcggaggcttccgtgagaagagtgcggagaggagcaccgaccgtggggcg
gagagaggaggcgcagagagaggaggaggcgccgaaagaggaggtgtcgacagaggagga
gcggagcgtgaccgttatgacggagacaggagaggaggggagcaggcgactgggagagac
tcatcctacgaccgtagaggtggtcacaccgaccgtggtgaccgcagagagaacagggag
agagaccaaagagcttcctctcctggtcggcacccagccagaggagaagagccagacagg
gaggagaccagagggagggatgaacgcagaggagaggaaaagggaggggacaggcgagag
gacagggcccgagagagggagcgagagagggaacgggaaagagagaaggagagagaaaga
gagaaggagaaggagagggaggcagagcgggagagggttcgggagagggagcgagagagg
gagcgagagagggaaaaggaaagggagagggaaaaggagaaagagagggaaaaggagcga
gagagggagcgggagagggaagagagggagcgggagagggaggagcgagatagggagagg
aaggagagagagcgggagagggaacgagagcgggagagggagcgagagcaaagagagagg
gagaggcagcgggaatgggaggagcgtgagaaaggaagggatgagcgacgggaacggact
agggatgaaccaagggatgaccgctctgtccgagactcgcatgaagaccgcaagaccagc
cggaagaggcatagggtagagaccacacccagcccgactcgcccctctcccaagcgagca
agggacgccaccccaggagacggcgaggaatacaacagccctgaggagaaaagtgagcgt
ttgattggtggaggtcagcccaaggtccgccccacctctggctctggcccaatcaccatc
ctccccgtcacagtaccagtgtgtcctcctcctccagtgcttgacagtgttgagaaacac
cgactgttgagtcaggtggtactcccgccccaggaccccctcctgcgttccccccccagc
acctctgtagcggaggacgccaagcccagccgctggaaggacgaggagcgccgtggaggc
ggggacaagagggaggggaggagccgccggaacgaggaggccgacgcccgcggagacaga
ggaggagcaggcagaggaggggagagacggggggagcacccctcagatagcagtacccct
gtctcggcctccggctcggactctaggaggggtaaagagagggacggtcgggagcccacc
cctcccccgcctcccgtggccctggtcactgaggacagagatgctccagtcccggcaggt
catgaggagggcaagaagaagactaagtcccagaagaaaggcctgaagaaggggaggaag
gaggaggctgtggcaggaggtgtttcaggagctccagagaggttcaccaacccagagccc
ccctcctccatggccctctcggacggccccccgccccctctcctctctccccgcaaagcg
cctaagaagaaggcgctggacaagaagaggaaacgatcccgtggcgctgagtcggacgcg
tctgaggaggaaccaggctcctcccatcttcccccgggcaagaggaacaagaggggtccc
cggacacccccgcccgcgccaaaggaggctctgctatcccagagggccatgccacattca
gttgcagagcccttgccacagcccgtcaaaatggacgccaacttcagcgactggtctgac
gaggatgtgctggagcgcggtggtggatcggctcccgttaaggcaccccccacagtccca
actgagaggactccgaccgaagctcttcccaggagaggaggtccgagggggggcaaggag
aggttggagaggcctgttcccctgcccatcgcccctctgctgtcccaggaccctcccatg
ttactccagaccctgcctccccagcccctcatgtcccagcccctgctgaggaagcatcct
ccggagcagaagaggagcagcagtatgggaagcaaccagagcagggcctcatccagacgt
ctccgttctccctccaacgagtcagcccacagagaggaccctcagcagggccaaggacca
ggccgacccaggagaggacaccagctccagggggccaactcccgagaccgggaacgagaa
agggagcgagaaagggagcgagacagggaaagagagagggagcgtggtgagagagagagg
ggaccagtgctcacagagcctccagtggtgaggggagaggagcggaagtcacgcatcgac
cagctgaggagaggagagcccagtcgcagcacctcctcagaccggcaggactctcgcagc
cacagctccagacgtagctctcctgagtcagagcgtcaggtgcagtcgcgggccgggtcc
tacgatggccgagagcgtgagagggagagagagagggagcgggaacagtttgagagggag
cgtgagcgcaaggacctccgacagcaacaggggcctccggggccactacctcctctccag
cagcaggggcagcagagagactgggagcccgaggggccacgggagtggggtgggaggggc
cgtgaacccctcctcatgcgtggaggcaacagagagcgtgatctccgtgacatgcggggt
gagagagagcggcttctgcccgagggtctcctgcagcagcacgaacgagagcgggaaagg
gagcgtggtggcaacaggggcattggccgcggtggcgaccatggcaacgaccgggagcgg
gagaggatactgctgatggacctgccgccacatggggaccccaagaacaggatggatatg
aggggagacagaccagatatgaggggagacagaccagatatgaggggagacagaccagat
atgaggggagacagaccagatatgaggggagacagaccagatttaagaggggacatgcga
ggagatatgagacctgatatgaggggagacattcgaggggatatgagaggagacatgaga
ggagacattcgaggagatatgagacctgatatgaggggagacattcgaggggacatgaga
cctgatatgaggggagacatgagacctgatattaggggagacattcgaggggatatgaga
cctgatatgaggggagacatgagacccgatattaggggagatattcgaggggatatgaga
cccgatatgaggggagacattcgaggggacatgagacctgatatgaggggagacatgaga
cctgatattaggggagacattcgaggggatatgaggggagacattcgaggggacatgaga
cctgaaattaggggagacattcgaggggacatgagacctgatattaggggagacattcga
ggggatatgagacctgatattaggggagacattcgaggggatatgagaggggggccagat
ataagaccggacataaggccagatcacatgagaccagatatcagggggccggacagggct
gagttctctctcctgctcccccacgaagccttgggacacggcggcatggaccaggacaaa
gcaggcaacagccatcaccctgtgggaggacagatacaggaagcagagaaacaggacagc
gttgccgacgaagatgacgcgaaggcggatgacgctgtgtcggtggtgtctggcggggag
gagtacgagccaatcagtgatgacgagttagatgagatcttggcggacagcgcccagaag
agagaggatgggcaggaagaagagaagacgccaggtcccctggatgtgattgatgtggac
tggtccagcctgatgcccaagcagaagcaggagccccgggcggcaggggcagctctgctc
cggttcaccccaggggcagtgctcctcagggcgggcgtctccaagcggctggctgggccc
gagctcctggaaagagtcagggaggtctgcaaaaaggagctggacgaccctaaagatgct
gacaagctgtttgagcacgacctgggtgctctgaacaaggcagctctgaacaggaagata
gagagggcaggtctgctgaggaacctgggcccctgctgtaaggccctctgtgcccgcagg
gacatggccatcagacggcagctcctcaagaacgaaaagggcctggccaagcagatgtac
cccagtgttcctgtggtggacagtgagctcttccaactcagcatgcgtctcttcaagaag
actgtagccgccgccagaagcaaccagcccccgttggggcccccagcaggcccagagaag
gccgacaaggggccaccggggttggtaccggcagcttcaccggtagccaagcccagtaca
ccacagccccccgagatgtgtgtctcctga
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integrated database retrieval system
