Oncorhynchus kisutch (coho salmon): 109887961
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Entry
109887961 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent translocase ABCB1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109887961
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109887961
04147 Exosome [BR:
oki04147
]
109887961
04090 CD molecules [BR:
oki04090
]
109887961
Enzymes [BR:
oki01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
109887961
Transporters [BR:
oki02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
109887961
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109887961
CD molecules [BR:
oki04090
]
Proteins
109887961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
Rad17
Zeta_toxin
AAA_16
RsgA_GTPase
G-alpha
AAA_28
AAA_30
AAA_7
AAA_29
NTPase_1
PRK
AAA_15
Abhydrolase_2
Motif
Other DBs
NCBI-GeneID:
109887961
NCBI-ProteinID:
XP_031692748
Ensembl:
ENSOKIG00005007031
LinkDB
All DBs
Position
LG2:complement(1370891..1405702)
Genome browser
AA seq
1279 aa
AA seq
DB search
MGKKDDIAVAKVKIEQNGDIGEDKDEEKKGEKEPKMPMIGAIALFRFADGWDRLMIVLGT
IMAMVNGTVLPLMCIVFGDMTDSFIGDSIQTQNNFTNITFPVSNTTLGEEMTGHAIYYSI
MGAVVLVAAYMQVAFWTLAAGRQVKRLRKLFFHCIMQQEIGWFDVNETGELNTRLTDDIY
KINEGIGDKVGMLIQSFTTFIASFIIGFSKGWKLTLVILAVSPVLGFSAFIFSKVLTSFT
SLEQSAYAKAGAVAEEVISSVRTVFAFGGQQKEITRYEKNLEDAKNMGIRKAISANIAMG
FTFLMIYLSYALSFWYGSTLILSGEYTIGTVLTVFFTVLIGAFAMGQTSPNVQAFASARG
AAHKVYNIIDNKPHINSYSDHGHKPDVIKGNIEFNNIHFTYPSRPSVKVLNGMSLSVRSG
QTIALVGSSGCGKSTTVQLLQRFYDPQDGSVCVDGHDVRSLNVRFLREMIGVVSQEPILF
ATTIAENIRYGRPDVTHQEIEQAAREANAYDFIMTLPDKFETLVGDRGTQMSGGQKQRIA
IARALVRNPKILLLDEATSALDAESETIVQAALDKVRQGRTTIVVAHRLSTIRNADVIAG
FQKGEIVELGTHSQLMKKEGVYHTLVTMQTFKSPEEGEEAVEEQVLEEKSPSVMPFSETT
LIRRKSTKGSSFIGSEKGDKDKTEVEEEDEEIPPVSFLKVLKLNLPEWPYMVVGVICATI
NGGMQPLFAVIFSKIIAVFAEQDQELVRQRSSLYSIMFALIGVVSFITMFLQGFCFGKAG
EILTMKLRLMAFKAMMRQELGWYDSHKNSVGALTTRLATDAAQVQGATGVRLATLAQNVA
NLGTSLIISFVYGWQLTLLILCVVPVMAVAGGIQMKMLSGHAVKDKKELEQAGKIATEAI
ENIRTVASLTREQKFESLYQENLIVPYKNSQKKAHVYGITFSFSQAMIYFAYAGCFRFGA
WLIEEGIMTFENVFLVISAVLYGAMAVGEANSFTPNYAKAKISASHLMFLINREPAIDNC
SREGEIPDHFDGNVRFQGVRFNYPSRPDLAVLQGLELKVQKGQTLALVGSSGCGKSTTIQ
LLERFYDPLQGTVMLDNSDAKKLNIDWLRAQMGIVSQEPVLFDCSLAENIAYGDNTRKVT
MEEIQSAAKAANIHSFIDDLPQKYDTQAGDKGTQLSGGQKQRIAIARAILRNPKVLLLDE
ATSALDTESERVVQEALDVARQGRTCIVVAHRLSTIQNADLIAVFQKGVVVEQGTHQQLL
SQRGVYYSLVTTQLGHGRK
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaggacgacatagctgtggccaaagtcaagattgagcaaaacggagacatt
ggagaggataaagatgaagagaaaaagggggagaaagagccaaagatgccgatgattggc
gccatagctctgttcaggtttgctgatggttgggacaggttgatgattgtgctggggacc
atcatggctatggttaatggaacggtcctccctctcatgtgtatcgtctttggggacatg
actgacagcttcataggagactccatacagacacagaataacttcaccaacatcacgttc
cctgtttccaacaccactctgggagaggagatgactggccatgctatctactactctata
atgggtgcggtggtgttggtagcagcctacatgcaggtggccttctggaccctggcggca
ggcaggcaggtcaaacgcctcaggaagctcttcttccactgcatcatgcagcaggagatc
ggctggtttgacgtcaacgagacgggagaactcaacacccgcctaacagatgacatctat
aagatcaatgaggggataggtgacaaggtgggcatgttgatccagtccttcaccaccttc
attgcttccttcatcatcggcttcagtaaaggatggaagctcacccttgtcatcctggct
gtcagccctgtgctgggcttctctgcttttatattcagcaaggtactgacgtccttcaca
tccctggagcagagtgcttatgctaaagctggagccgtggctgaggaggtgatctcttct
gtcagaacagtcttcgctttcggtggacaacagaaggagataaccaggtatgagaaaaac
ctggaggatgctaagaacatggggatccgtaaagccatctctgctaacatcgccatgggc
ttcaccttcctgatgatctatctgtcctacgctctgtccttctggtacggcagcaccctc
atcctatctggagaatacaccattggaactgtcctcaccgtgttcttcacagtgttgatc
ggggcatttgccatgggacagacttctcctaatgtccaggccttcgccagtgcccgggga
gcggcacacaaagtctacaatatcatcgacaataaaccccacatcaacagctactcagac
cacggccacaagcctgatgtcatcaaaggaaacatagagtttaacaacatccatttcacc
tacccctcacgacccagcgtcaaagtgttgaatggaatgtctctgagcgtgcgtagtggc
cagaccatagctctggtaggcagtagtggctgtgggaaaagcaccaccgttcagctgctg
cagcggttctatgatccacaagatggatcagtgtgtgtagatggtcatgacgtgcgctcc
ctgaacgtgcgcttcctgagagagatgattggcgttgtcagtcaggagcccatcctgttt
gctaccaccatcgctgagaacatccgctatggacgacctgacgtcacacatcaggagata
gaacaggctgctagggaggccaacgcctacgacttcatcatgacactacctgataagttt
gagactctagttggagacagaggaacccagatgagtggaggacagaaacagaggatcgct
atcgcacgcgctctcgtacgcaaccccaagatcctcttgttggatgaggctacctcagcc
ctcgacgccgagagtgagaccatcgtacaggctgctttggacaaggtgagacagggtcgt
actaccatcgtggtggcccatcgtctgtctactatccgtaatgctgatgtcatcgcaggc
ttccagaagggagagatcgtagagctgggaacacacagccaactgatgaaaaaagaagga
gtctaccacacactggtcaccatgcagacgtttaagagtcctgaggagggcgaggaggct
gtggaggagcaggttctggaggagaagagtccgtcagtgatgccgttctcagagaccacc
ctcatcaggaggaaatctaccaagggatcatccttcatcggctcagagaaaggagacaag
gacaagactgaagtggaagaagaggatgaagagattcctcctgtgtcgtttctgaaggtg
ttgaagctgaaccttcctgagtggccctatatggtggttggtgtgatctgtgccactatc
aacgggggcatgcagcctctcttcgctgtcatcttctctaaaatcatcgctgtgtttgca
gagcaagaccaggaactagttagacaacgctcctcgttatactctatcatgttcgccctc
attggagtcgtctccttcataaccatgttcctgcagggattctgttttgggaaggccggg
gagattctgaccatgaagctgagactgatggcctttaaagccatgatgagacaggagttg
ggctggtatgacagtcacaagaacagtgttggagctctcaccactagactggctacagac
gcagcacaagtacagggggctacaggagtgcgcttggccactctggcccagaacgtggct
aacctgggcaccagtctgatcatctcgtttgtgtacgggtggcagctgactcttctcatc
ctgtgtgtggtacctgtcatggctgtagctggaggcatacagatgaagatgctctctggt
cacgctgtcaaagacaagaaagagctagaacaggctggcaagattgccacagaggccata
gagaacatccgtacggtggcatctctcaccagagagcagaagtttgagtctctgtaccag
gagaacctcatagtgccttacaagaactctcagaagaaggcccatgtgtatggcatcaca
ttctccttctctcaggccatgatctactttgcctatgcaggctgcttccgcttcggagcc
tggctcatagaggaaggcatcatgacctttgaaaatgtcttcctggtgatctctgcagtg
ctgtacggagccatggcagttggagaggccaactccttcacgcctaactatgccaaagcc
aagatatcagcatctcaccttatgttcctcatcaacagagaacctgccatagacaactgc
tcacgggagggagaaataccggaccactttgatggtaacgtgcgtttccagggagtgagg
ttcaactacccgtcccgtccagaccttgctgtcctgcagggactggagctgaaggtgcag
aagggccagactctagccctggtgggcagcagtggctgtgggaagagtacgaccatacaa
ttactggagaggttctacgacccactacagggaacagtgatgttggacaacagtgatgct
aagaagctgaacatcgattggctgagggcccagatgggcatcgtatcccaggagcccgtg
ctgtttgactgtagtctggcagagaacatcgcctacggagacaacacacgcaaagttacc
atggaggagatccagagtgctgctaaagctgccaacatacacagcttcatagacgacctg
cctcagaagtatgacacccaagctggtgacaaggggacccagttgtcaggaggacagaag
cagcgtatagccattgccagagccatcctccgcaaccccaaagtcctgctgttggacgag
gccacctcggcactggacacagagagcgagagggtggtgcaggaggccctggatgtggct
cgacagggcaggacgtgtatcgtggtggcccaccgcctttccaccattcagaacgctgac
ctgatcgctgtcttccagaagggagtggtggtggagcagggcactcatcaacaactactg
tcccagagaggagtatactactcactggtcaccacacagctgggccatggcagaaaatga
DBGET
integrated database retrieval system
