Oncorhynchus kisutch (coho salmon): 109888102
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Entry
109888102 CDS
T09179
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oki03009
]
109888102
Enzymes [BR:
oki01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
109888102
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
109888102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
109888102
NCBI-ProteinID:
XP_031643080
Ensembl:
ENSOKIG00005005625
UniProt:
A0A8C7CX56
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All DBs
Position
LG13:complement(72704416..72711014)
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AA seq
748 aa
AA seq
DB search
MGRKLDPTTYVKKGPGRKSRKQKGAETELAKFLTDEDTAPKRLSSRSRKRAGKRAQVTKK
PKESIEKEEPKKGFTDENSEWLKPAKRKREVGQSDNEDDSDSQWEQEEDEGQEGGENNKG
KKLLIEGDGDDDDLVDDYGALEDSSEGEGEVDGDGEELLPIERAARKQKKLQEAMGQESD
DDDEDDDKRKSGDEDMDEDDTVQANLDEMDKFILPGAEEIAKEGVLLVDLQTIHQRIKDN
VDVLSHFATKREEGKERTEYLSLLKKDLSTYYSYNNFLIDKLLDIFPVSELIDFLEANEI
QRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGATPEYLAGHY
MLQGASSFLPVMALSPQEGETVLDMSSAPGGKTTYMAQLMRNTGVIVANDASADRLKSVV
GNIHRLGVTNSMICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPAVKTSKDESDIQR
LAHLQKELLLAAIDSVNAESPSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVQTGLDF
GKEGFTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTVPTTAVEKDGEDETKP
SEAVEVTADSSDEDGPSKAGSKNKSKKQKPVPGKPAMSQKATANGKPAKSIGKKTTNPST
LKKSEKPTGPKKAKIAKMDGGTVKVDGELKKSNTVKTEGETTKELKEGSRFEKKGDKQRK
SPMQSKKRMGKNKFNKLKKLLKKEEVGQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatcccaccacttatgtgaagaaggggccgggacggaagtccagg
aagcagaaaggagcagagactgagctggccaagttcttaacggatgaggatactgcacca
aaacgactgtcaagcaggtccaggaaaagagctgggaagcgagctcaagtgaccaaaaag
cccaaggaaagcattgagaaggaggagccaaaaaaaggattcacagatgaaaatagtgaa
tggctgaagccagcaaagaggaagcgtgaggtcggtcaatcagataacgaggatgacagt
gacagccaatgggagcaggaagaggacgagggacaagagggaggggagaacaataaaggg
aaaaaactgctaattgaaggagatggtgacgatgatgacctggttgatgactacggtgca
ttggaggacagcagtgaaggagagggggaagtagatggtgatggagaggagctactcccc
atcgagcgagctgccaggaagcagaagaagctgcaggaagccatgggccaggagagtgat
gacgatgatgaggatgatgataagaggaagagtggagatgaagacatggatgaagatgac
acggtacaggctaatttagatgagatggacaaattcattctacctggagcagaggaaata
gcaaaagagggcgttttgcttgtagacctgcagaccatccaccagagaataaaggacaac
gtggacgttctctctcactttgctaccaagagggaggaggggaaagagagaacagagtac
ctctctcttctcaaaaaggatctttccacgtactacagctacaacaatttcctcatagac
aaactgctggatatcttcccagtgtcagagctgattgatttcctggaggccaatgaaatt
cagcgacctgtcaccattcggaccaatacactgaagacaaggaggagggacttggctcag
gccctgatcaacagaggggtgaatctggatcctctggggaagtggtctaaagtgggcctg
gtcatctttgactcctcagtacccatcggtgcgaccccagagtacctagctggtcactac
atgctgcagggagcctccagcttcctgcctgtcatggctctctctccccaggagggggag
actgtgctcgacatgagctcagctcccggaggaaagaccacctatatggcccagttgatg
aggaacacaggagtaattgtggccaatgatgccagtgctgacagactgaagagtgtggtg
ggcaacatccaccgtctgggagtcaccaactcaatgatctgtaactacgacgggaggcag
ttccctaaggtaatgggtgggtttgacagagtgctgcttgatgctccctgctcaggcaca
ggagtaatctccaaagaccctgctgtgaagaccagtaaagacgagtctgacatccagcgg
ttggcccacctgcagaaggagctcctcctggcggccatcgactcggtcaacgctgagtct
ccctctggaggctatctggtgtactgcacatgctctatcatggtggaggagaacgagtgg
gtagtggactacgctctcaagaaaagaaatgtcaaacttgtccagactggactggacttt
ggcaaagaaggcttcaccagattcaaagagagacgattccatccctctctgaaactctca
cgccggttctatcctcattcccacaacatggacggtttctttgtggccaagctgaaaaag
ttctccaacacggtcccgaccacagcagttgaaaaggacggagaagatgaaaccaagcca
tctgaggcagtagaggttacagctgattcctctgatgaggacgggccatctaaagcaggg
tctaagaacaagtcgaagaagcagaagccagtccctggcaagccagctatgtcacagaag
gccacagccaacgggaagccagccaaaagcatcggcaagaaaacaacaaacccaagcacc
ttgaaaaagagtgagaaaccaaccgggccgaaaaaggcaaagatcgctaagatggatggt
gggactgtgaaagtggacggagagctcaagaagtccaacacagtcaaaacagaaggggaa
acgaccaaagaattaaaggaagggagcaggtttgagaaaaagggcgataaacagaggaaa
tcccccatgcagagcaagaagagaatggggaagaacaaattcaataagttgaagaagctg
ctgaaaaaagaagaggttggacaatga
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