Oncorhynchus kisutch (coho salmon): 109888114
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Entry
109888114 CDS
T09179
Name
(RefSeq) torsin-1A-like isoform X4
KO
K22990
torsin-1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
oki03110
]
109888114
04131 Membrane trafficking [BR:
oki04131
]
109888114
Chaperones and folding catalysts [BR:
oki03110
]
Other chaperones and cochaperones
Others
109888114
Membrane trafficking [BR:
oki04131
]
SNARE
SNARE associated proteins
Others
109888114
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Torsin
TOR1A_C
AAA_2
AAA_5
AAA_22
NPHP3_N
VMAP-M1
Motif
Other DBs
NCBI-GeneID:
109888114
NCBI-ProteinID:
XP_020321263
Ensembl:
ENSOKIG00005038359
LinkDB
All DBs
Position
LG29:13194679..13240113
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AA seq
334 aa
AA seq
DB search
MRPFFLLGFLLSNITATAAIEPISTSIAVGMAAALTGFLATYQNVFYYFHECCRPEWISF
NRTGLEVALDRKLFGQHVASRVIQKAVTGFMNNKNPKKPLVLSLHGWTGTGKNFVSQLIA
ENLYKEGMASSFIHQFVSTAHFPHLSQIENYKSQLQQWVKGNVTNCPRSMFIFDEMDKMH
PGLIDCIKPYLDYYENLDGVSYRQAIFIFLSNAGGEHITQVALNFWKEGRDREEIQLQDL
EPALSLSVFNNKKSGLWHTSLIDKNLVDFFVPFLPLEYRHVLLCGMAEMSAKGLEPDQDV
VDQMARDLVYFPKSEKIFSGKGCKTIGGKLDYYT
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccgttttttctgttggggtttctgttgtcgaacatcactgcgacggcggcgatt
gagcctatcagtaccagcatagcggttggtatggctgcggctctcaccggcttcctcgca
acctaccaaaacgtgttttactattttcacgaatgttgtagaccagagtggatctccttc
aacagaacaggtttggaagtggccctagatcggaagctgtttggtcaacatgttgcctcc
agagtcatccagaaagctgtaacgggattcatgaacaataaaaatcctaaaaagcccctg
gtgctctctctccatggctggactggcacagggaagaacttcgtcagccagttgatagct
gaaaacctctacaaggagggcatggccagcagtttcatccatcagtttgtttctacagct
cacttccctcatctgagtcagattgagaactataagtctcagctgcagcagtgggtcaaa
ggaaacgtcaccaactgcccacgttccatgttcatctttgacgagatggacaagatgcac
cctggcctgatcgactgtataaagccctacttggattactacgaaaatctggacggggtc
tcctaccggcaagccatcttcatcttcctcagcaacgctggaggagagcacatcacgcag
gtggccctgaacttctggaaagaaggtcgagaccgagaggagatacaattgcaagactta
gaaccagctctctccctgtccgtgttcaacaacaagaagagtgggttgtggcacaccagt
ctgatagacaagaacctagttgacttctttgtccccttcctgcctctggagtacagacac
gtgctgctgtgtggcatggcagagatgtccgccaagggcctggagcctgaccaggacgtg
gttgaccagatggccagagacttggtctatttccccaagagtgagaagatcttctccggc
aagggctgcaagaccatcggtggcaagctagattactacacgtag
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