Oncorhynchus kisutch (coho salmon): 109888133
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Entry
109888133 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
109888133
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109888133
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109888133
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109888133
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
109888133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
109888133
NCBI-ProteinID:
XP_031676667
Ensembl:
ENSOKIG00005040569
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MFNKTGPGLSSRGVLWGLCILLLYTSPLCCXANFSQAKELVYKIKEGLPSGTLIGSMGSD
LHLDLSLDPHVLFNLPQKKPSDQYVTLNSTTGQLFTSGNEIDRETLCPDSSEYNQGCVLS
LDVFVLPQQYFQLVKVKILVEDVNDNRPRFPTGEIRVSVPENTQVNARFAVEQSATDPDL
GFHGVQTYWLVNDFGVFTLDVEENEGGELTPFLIVTDELDRERQEEYITDIIAEDGGLPP
LLGTATLRIIITDVNDNCPQFTESQVNVTLYGNTTKGKHLSRLHAFDPDQGANAVISYAY
SDRVPREARALFHLDRITGVIKLAGQINTATGKFYKLTVLANGPGCVPAVATVTVHVIRV
ASGPPVIMPRYIAAEKDGVVTMKESEPPFSPIAFFTVSNTDQRGQGTECLLEGSGPFRLT
PYKRLKNEYLLETTEPLDHEQRQDYELTVVLRNPRGLAIKTFVKILVLDENDNAPVFKQS
LYEVSVEENNPPNSFLTQLQATDQDSEARGEVIYTLGSDAPSIFLLERLTGVLTVSTSLD
REEKQTYRFMVRAVDRGTPRRESIATVVITVLDRNDNSPRFINKDFTFFVPENFPGFGEI
GVLSVTDADAGENGWVALSIVNGSDIFVIDAGRGALRARTPLDREQQGTYYLWIEAVDGG
EPSLSCLTVVTVLLLDVNDNPPVVLFPQSNQSYMLVLPSTLPGTSITEVYAVDKDTGMNA
VIAYSIIKRKGGEPGSFDIDPDTGNITLKRELSDRGLYSLLVKVSDHGQPEPLHSTVLVN
LFVNETVSNESYIQSLLTGEEAEIQMEEKQWYVGKLTERPGREDLFPCQPLLIALSVTCL
GLFCIAVTLTAYICCKKLKKWRKCQMKRLEVEMPLKVNGDDADRKRTEISNI
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaaacaggacccggacttagctcgagaggagtactgtggggtttgtgtata
ctcctcctttacaccagccccctctgctgtnttgctaatttcagccaagccaaagagctg
gtctataagataaaagaaggattaccgtcggggacactcatcgggtccatgggctccgac
ttacacttggatttatccctcgatccccatgttttattcaatctgccccagaagaagccc
agtgatcagtatgtcactctgaacagcactacgggacagctgtttacgtctgggaatgag
atcgacagggagacgctctgccccgactcctcggagtacaaccagggctgcgtcctctcc
ctggatgtgttcgttctaccccagcagtatttccagctggttaaggtcaaaatcttggtt
gaggatgttaacgataatcgtccgcgcttcccgacgggcgagattagggtttccgtcccg
gagaacacccaggtcaacgcgaggttcgcggtggagcagtcagcgacggaccctgatctg
gggtttcacggggtccagacttactggctggtcaacgacttcggggtgttcactctggac
gtagaggagaacgaggggggtgagctgacacccttcctcatcgtgaccgacgagctggac
cgggaacgacaggaggaatacataacggatattatagcagaggacggtgggttaccacct
ctccttggcactgccacgttgaggattataatcactgatgtcaacgataactgtcctcag
ttcacagaatcacaggtcaacgtgacgctctacgggaatacgactaaaggaaagcacctg
tccaggttacacgccttcgaccccgaccagggcgccaacgccgtgatcagctatgcgtac
agcgaccgcgttccccgggaggctagagccctgttccatctggaccggattaccggggtg
atcaaactggccggtcagatcaacaccgcaaccgggaagttctacaaactcactgtcctc
gcgaacggacctggttgcgtccctgccgtcgccacggtgacggtgcacgtgatccgggta
gcttccggtccgcctgtcattatgccgcgctacattgcggcggagaaagacggcgtggtc
acgatgaaggagtccgaaccgccgttttccccaatcgcgtttttcaccgtgtcgaacacg
gaccagagaggacaagggacggaatgtctacttgaaggatccggcccgttccgactgaca
ccttacaaacggttgaagaacgagtatctgttagagacgacggagccgctggaccacgag
cagaggcaggactacgagctgaccgtagtgctcaggaaccccagaggtctcgccattaag
accttcgttaagatcctggttctggatgagaacgacaacgcgccggtcttcaaacagtct
ctgtatgaggtctctgtggaggagaataaccctcccaacagcttcctgacccagctccag
gccacagaccaggacagtgaggccagaggagaggtcatctacacgctggggtcagacgct
ccctccattttcctcctggagaggctgaccggcgtgctgaccgtgtccacatctctggac
cgagaagagaagcagacctacaggttcatggttcgggcggtggaccgagggacccccagg
agagagtctatagctacagtggtcatcactgtgctggaccgcaatgacaacagcccgcgc
ttcatcaacaaagacttcacattctttgtgccggagaatttcccgggttttggcgagatc
ggcgtcctctcggtaacggacgcggacgcaggtgagaacggctgggtggccctctccatc
gtcaacggcagcgacatctttgtgatcgacgcggggcgcggtgctctaagggcccgtacc
cctctggaccgggagcaacaggggacgtactacctctggatcgaggcagtcgacggaggg
gaaccctctctctcctgcctcaccgtggttaccgtcctcctccttgacgtaaacgataac
cctcccgtcgtcttgttcccccagtctaaccagtcctacatgctggtgttacctagcacc
ctaccagggacctccatcacagaggtttacgccgtggataaagacacaggaatgaacgcc
gttatcgcctacagcatcatcaagaggaagggtggcgagccggggtcgtttgatatcgac
ccggacacagggaacatcacgttgaagagagaactgagtgaccgcggtctctacagtcta
ctggttaaagtctcggaccacggtcaacccgaacctctccactccacggtcctggtcaac
ctcttcgtcaacgagacggtttctaacgagagctacatccagagtcttctcaccggggag
gaggctgagatccagatggaggagaagcagtggtacgtgggtaaactgacagagaggccc
ggcagggaggacttgttcccctgtcagccgctactcatagctctgtcagtgacctgtctg
ggactgttctgcatcgccgtcacattgactgcttatatatgctgcaagaaactgaagaaa
tggaggaaatgccaaatgaaaagactagaggttgaaatgcctttgaaggtgaacggtgac
gacgcagatagaaagcggacggaaatctcaaacatttga
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