Oncorhynchus kisutch (coho salmon): 109888412
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Entry
109888412 CDS
T09179
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109888412
Membrane trafficking [BR:
oki04131
]
Protein recycling
Others
Others
109888412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
109888412
NCBI-ProteinID:
XP_031687197
Ensembl:
ENSOKIG00005019785
UniProt:
A0A8C7GTA1
LinkDB
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Position
LG1:68522071..68662342
Genome browser
AA seq
1288 aa
AA seq
DB search
MERVVRLCPIWHNNVFWFMFLIIIYFFLAAKSELTCRSCQPGDKGRIKELLLKTDTREFA
TGYGEEVIGNGDWATASRSLNSASAETQQLDCAAGSDACIQGKYIYSRRKRNTDMLFRSK
NALLDGGMHYGGGKQRKFTPRGEYKVSNLKMNLHAGNTDVGKARADLIPGITHKHRVRRN
SPRANIGDDKVKSSGSPKRRETLPLSYSREGITSPAGRSRVTRSELRWSNEDRRAASSRQ
DELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGT
TYQKLNEKVGAKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEGATYQKYRLSFYIL
SLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVAPNRFYWSKTGLDKEPGLIHLE
TIISEGQALYVTCKLQNCTEANKGKPFPGYIDPNSLVVQDEYVFVQVSTGGRPIYYVSAM
REVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVSETGGVFYTLALENV
VSSMGHEGNVMIDLYEVAGIKGMFLANKKTDNVVKTYITYNRGRDWRLLQAPTADLRGNS
IRCELPYCSLHLHLHVSANPYTSGNIESKDSAPGIIVASGSIGAELTTSNVSMFITSDAG
NTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWMSFDEGRQWNKYSFTMSPLFVDGL
LGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEGDYQTWHLHNRGEPCIMGVK
RIYRKLKPIARCVMGKTYSVTMTSAPCDCTEADFECDYGYERRSDGKCTPAFWFLPSSMS
RSCTTGTTFINSTGYRKVVSNNCTAGVIAEYTARRQHCPTQAPKGLHLVTSEGKLTATLG
TNVTFLVFLEEGDGARTSIMVDFGDGHALTYSNVSSIEDGVKHVYKAVGIYRVSATGENR
LGSESVVLYLHVTCQLEYIHLSAPFVAVKSKEVNLTAVLWPSQVGTVTYIWWFGNNTEPI
ITLEGSVACTFSREGVNTVTVQVSAGNAILQDRKTIAVHEYFRSHLLAFSSNLDDHNPDV
AEWRLDVSRVIKNSMVKATGVSPELLLVTVLPGLPTAAEFFLLPDKELTEGKPEKNSAHL
DQLSEILLSALNQNMVQFTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVLG
LAIFVVYKFKRKIPGLNVYAQMQNEKEQEMIPSPVSPTESTLVSPNTPMELVTSPELMDT
ELNTRPIGCIKPHAHVKFSTELPTYINI
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggagagggttgtcagattatgccctatttggcacaataacgttttttggtttatgttt
ttgataataatatatttctttctagccgctaaatcagagctaacttgcagatcatgtcag
ccgggagataaggggcgtattaaggaattactgcttaaaacggacacacgagaattcgca
acagggtacggagaggaagttattggaaatggagactgggcaactgcttcacggagttta
aattctgcaagtgccgaaactcaacagcttgattgcgcagctgggtccgatgcatgcatc
caggggaaatatatctactcaaggcgaaaacggaatactgacatgctgttccgttccaag
aacgcactactcgatggaggaatgcactacggtggtggtaaacagagaaaattcaccccg
cgcggtgagtacaaagtttccaacctgaaaatgaaccttcatgcaggaaatacagatgtc
gggaaggctcgcgcagatttaattcccggcatcacacacaagcaccgagttcgtaggaac
agcccgagagctaatattggggacgataaagtgaagtcctccggctcacccaagagaagg
gagacgctgcctctaagttactctcgagagggcatcacctcaccggctgggcgcagcaga
gtgacacggtccgaattgcgatggagcaacgaggacaggagagcggccagttcgaggcag
gacgaactcaaactcaccagttcaaccttcgctttgaccggagattccgcgcacaaccaa
gccatggtgcactggtctgggcaaaacagcagtgtgattctcatgctgaccaagctgttt
gacttcaacctgaacagtgttacggagagctcgttgtggaggtcaaccgactacggaacc
acttaccagaagctcaatgagaaagtgggggcgaaaacaatcctcagctacttgtacgtc
agtcccaacaacaagagaaagatcatgcttctgactgacccggaggtggaaagcagcctg
ctgatcagctccgatgagggagccacctatcagaagtaccgcctcagcttctacatcctc
agccttctcttccaccccgagcaggaggactggatccttgcctacagccatgaccagaag
ctgtacagctcggtggagtttggaaggaggtggcaacttgtccatgagagggtggccccc
aatcgattctactggtcaaaaacgggtttagacaaagaaccgggcttaattcacctggaa
accatcatctctgaaggacaggcgctgtacgtcacctgcaagctgcagaactgcaccgag
gccaataagggcaagccgttccctggctacattgaccccaattcccttgtggtgcaagac
gagtatgtgtttgtccaggtgtcaactggtgggcgtccaatctactacgtgtcagccatg
cgggaagtcttcacacccatgaagctacccaaatacaccttgcctaaggatctgcatgtg
atcagtacggatgagaaccgggtggttgcggcggtgcaggagtggaaccagaacgacacc
tacaacctgtacgtgtcagagactggaggggtcttctacaccctggccctggagaacgta
gtcagcagcatggggcacgagggcaatgtcatgatagacctgtatgaggtggcgggaata
aaagggatgttcctcgccaacaagaagacggacaacgtggtgaagacttacatcacctac
aacagagggagagactggaggctcctgcaggctcccactgctgacctgaggggcaacagc
atccgctgtgaactaccatactgttccctacacctccatctgcatgtgtcggccaacccc
tacacgtcggggaatatcgagagcaaggactctgccccggggatcattgtggcctcaggc
tccatcggagcggagttgaccaccagcaacgtgagcatgttcatcacctcggacgccggc
aacacgtggagacagatctttgatgaggagtacagtgttctctacctggaccaaggaggg
gccctggtggctataagacacactccactccccatccgacacctatggatgagtttcgat
gaggggagacagtggaataaatacagtttcaccatgtctcctctgtttgtggacgggttg
ctaggggagccgggggaggagactctcatcatgacgatctttggccacgtcagtcaccgc
tccgagtggcagctggtcaagattgacttcaggtccatcttcaaccggagatgtacagag
ggggattaccagacatggcacctacacaaccggggcgagccgtgcatcatgggagtgaaa
agaatctacaggaagttgaagcccatagccaggtgcgttatgggtaagacatactcggtc
acgatgacctcggcgccctgcgactgcacagaggctgactttgagtgtgactatggctac
gagaggcggagtgacggcaagtgcacccccgccttttggttcctcccatcgtccatgtct
agaagttgtaccacagggactactttcatcaacagcactggctacaggaaggtggtgtcc
aataactgcacagcgggagtcatagcagagtacacggccaggaggcagcactgtcctacc
caggcccccaaaggcctgcacctcgtcaccagtgaaggaaagctgacagctacgctgggc
accaatgtcaccttcctggtgtttcttgaagagggtgacggagccaggacgagcatcatg
gtggacttcggggacggtcacgctctgacctactccaacgtgagctccatagaggatggg
gtcaagcacgtctacaaggctgtggggatctaccgtgtgtccgctacaggagagaacagg
ctggggtcggagagcgtggtgctgtacctccacgtcacatgtcagctggagtatatccat
ctctccgctccctttgtggcagtgaagagtaaggaagtcaacctcaccgctgtgctgtgg
cctagccaagtgggaacagtcacctacatctggtggttcggaaataacactgagccgata
atcaccctggaagggagcgtggcgtgcacgttctcccgggaaggcgtcaacactgtcacc
gtgcaggtgtccgctgggaatgccatcctgcaggaccggaaaaccatcgctgtccacgaa
tatttcaggtcacatctactagccttctcatctaacctggatgaccacaaccccgatgtg
gccgaatggagactggacgtcagcagagtcatcaagaactccatggtcaaagccacaggg
gtgagcccggagctgctccttgtcaccgtcctaccagggttgcccacggctgcagagttt
ttcctcctgccagacaaagagttaacagagggcaagccagagaagaactcagctcattta
gaccagctctctgaaatcttgcttagcgccctcaaccaaaacatggtccagttcaccctt
cggcctggggtccaggtcacagtatacgctgcacatttgtcagcagcgcccctagtggac
acgagtgagaaccacagcggctcggccatgctgatgctgctgtcggttgtggttctgggt
ttggcgatatttgtcgtctacaaattcaaaaggaagatcccaggcctcaacgtctatgcg
cagatgcagaacgaaaaagaacaagaaatgatcccgagtccagtaagtccgacggaaagc
accctggtgtccccgaacactccgatggagctggtgacttctccggagcttatggacaca
gagttgaacacaaggcccatcggatgcatcaaacctcacgcacatgtcaagttctcaacg
gaactccccacgtacatcaacatttaa
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