KEGG   Oncorhynchus kisutch (coho salmon): 109888510
Entry
109888510         CDS       T09179                                 
Name
(RefSeq) lysine-specific demethylase 4B-like isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oki03036]
    109888510
Enzymes [BR:oki01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     109888510
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     109888510
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    109888510
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H JmjN PHD_2 PHD DUF4537 CDC45 Tudor_5 53-BP1_Tudor
Other DBs
NCBI-GeneID: 109888510
NCBI-ProteinID: XP_031678274
Ensembl: ENSOKIG00005000723
LinkDB
Position
LG4:complement(10837137..10929002)
AA seq 1276 aa
MGDMSVLPATMSLEAPDMGHDPAPDMGHDPAPDMGHDPAPDMGHDPAPNMSPELAADSAP
APELAPELTADSAPELAADSAPVPVMNPGCKIMTFRPTMEEFKDFAKYIAYMETQGAHRA
GLAKVIPPKGWKPRKSYDVIEEMTIPAPIMQVVTGQSGLFTQYNIQKKSMTVGEYRQLAN
SRKYCTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDSEISEWNIGHLNTLLDMVEQ
ECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERL
AQGFFPGSSQGCDAFLRHKMTLISPSILKKYSIPFDRITQEEGEFMVTFPYGYHAGFNHG
FNCAESTNFATLRWIDYGKMATQCTCRKDMVKISMDVFVRCLQPERYVQWKQGKDGMVLD
HQRPTTLTSPELEHWRANRVTYRQKLLQRALQKKEQLRRLKLEEVKVLAEEGIEMDAAEY
QRQVEEREAQRRQEREERMAREAFQTLEAMEREDQEREEQERQDRERQEAVAAKATRVHD
PQADPQHLTANGEKKKKKKKKKKKQQQPTLPLAPINSFQAAFEKFATFNMPQTPKEPQGS
NDTEIPAEGRLDVKGMQQSSYYSKQLKIKMEVKKSRRHPLSKPPMRSPLSIVKQEMSSDE
ELFSPLPLDGHVKKAGHLWQNRTPNILAEKSFNAAVATLEPYCAVCTLFCPYTQPQKDSL
YLSDSPSALNHTHTPGCGSRTHPLVPEMCFSAGPDNTEPLPSNSHTGEDCTSPLISCSFC
SLQVHSSCYGVSLDTVHNQSWMCSRCTALAWTADCCLCNLRGGALKMTTDNRWVHVICAI
AVAEARFVNAIAREPVDISAIPDSRKSLKCVYCHKNTKQMCGACIQCSHDNCSTSFHVTC
AHIAGVLMKPADWPYVVSVTCHKHKKTNHKARVGPRGEFSLGQKVIGRNIDGWFYPCTII
GMTSQTFYEVNYDDGSYCDNIFPENVVSHDCLRNGPPETGELTLVHNMEGQALNASYVKD
HVHKYYQVEFQDESQLLLKQTEIHSLEQDLPKRVCTRLAIPTQEALLTGDEPQAAKRPRL
PAPHPTPQAPMDPGCQPPATGPVPHSITPHTPSHAPGPSNTDISALTLTQALAIPISEPT
LTPMPTLTDPLPALSALAAPLLPLSPAVHFQDQGEAYTARSVPFQDQGEAYTARSVPFQD
QGEAYTARSVPFQDQGEAYTARSVPFQDQGEAYTARSVPFQDQGEAYTPSSSYVSYMETL
LNTHFPPQEDGPGPLF
NT seq 3831 nt   +upstreamnt  +downstreamnt
atgggcgacatgtctgttctacctgccaccatgtcgctggaagcaccagacatgggccac
gatcctgcaccagacatgggccacgatcctgcaccagacatgggccacgatcctgcacca
gacatgggccacgatcctgcaccaaacatgtccccagaactagctgcagattccgctcca
gccccagaattagcccctgagctaacagcagattcagccccagaactagctgcagattca
gctccggtcccagtaatgaatccaggttgtaagatcatgacattccggcccaccatggag
gaatttaaggactttgccaaatacattgcctacatggagactcaaggagcacaccgcgca
ggcctggcgaaggtgattccccccaagggctggaagccacggaagtcatatgacgtcatt
gaggagatgacgatccctgctcccatcatgcaggtggtgactggccagtcaggcctcttt
acccagtacaacatccagaagaagtccatgactgtgggggagtaccgccaactggccaac
agcagaaagtactgtactccccgacacaaggactttgacgacctggagaggaagtactgg
aagaacctcacctttgtgtctccaatctacggggctgacgtcagcggctccatctatgac
tccgagattagtgagtggaacatcggccacctgaacacgctgctggacatggtggagcag
gagtgtggcatcgtgatcgagggggtgaacactccctacctgtactttggcatgtggaag
accaccttcgcctggcacacagaggacatggatctctacagtatcaactacctccacttt
ggagagcccaagtcctggtatgccatcccacctgagcacgggaaaaggctggagaggctg
gctcaaggtttcttcccaggcagttcccagggctgtgacgcctttctccgccacaagatg
actctcatctccccgtccatactgaagaagtacagcatccccttcgacaggatcactcag
gaagaaggcgagtttatggtcacctttccttatggctatcacgccggattcaaccacggc
ttcaactgcgccgagtccaccaactttgccaccctgcgttggattgactacggcaagatg
gcaacacagtgtacatgtcgtaaggacatggtgaagatctccatggacgtgtttgtccgc
tgcctgcagccggagcgctacgtccagtggaaacagggcaaggacggcatggtgctggac
caccagcgacccaccaccctgaccagccctgagctggagcactggagggccaaccgggtc
acctaccgccagaaactgcttcagagagctttacagaagaaggagcagctgcggcggctg
aaactggaggaggtcaaggttctggcggaggaaggcatcgagatggatgccgccgagtac
cagcgtcaggtggaggagcgagaggcccagcggcgccaggagagggaggagaggatggcc
cgggaggcgtttcagaccctggaggccatggagagagaggaccaggagagggaagaacag
gagaggcaggaccgagagaggcaggaagccgttgccgccaaggccacaagagtacacgac
ccccaggcagacccacagcacttgacggcaaatggagagaagaaaaagaagaagaagaag
aagaagaagaagcaacaacaacctaccctgccactggcccctataaattccttccaagca
gcgtttgagaagtttgccacattcaacatgccccagacaccaaaggaaccccaaggcagc
aatgacacggaaataccagcagagggcaggcttgatgtgaaaggcatgcagcagtcatcg
tactactctaagcagttgaagattaagatggaggtgaagaagagtcgccggcaccccctc
agcaagccgcctatgcgctctccgctatccatcgtcaagcaggaaatgtccagcgatgaa
gagctgttctcccctttgccactggatggccatgtgaagaaggcgggccacttgtggcag
aaccgcactcctaacatcctggctgagaagagtttcaacgcggccgtggccaccctggaa
ccctactgtgccgtatgcaccctgttctgcccatacacccagccccagaaggactctctg
tacctgtctgacagccccagcgccctcaaccacacccacactcccggctgcggcagccgc
acccacccgctggtcccagagatgtgcttcagcgccgggccggacaacacggagccgctg
ccctccaactcccacacgggagaagactgcaccagcccgctgatctcctgctccttctgc
agcctgcaggtccactccagttgttatggtgttagtctggacacggtacacaatcagtcc
tggatgtgttcgcgatgtacagcgctcgcctggacagcggactgctgtctgtgtaactta
cggggaggggctctgaagatgaccacagacaaccggtgggtccatgtgatttgtgccatc
gccgtggcggaggctcgcttcgtcaacgccatcgcaagggagccggtagacatcagcgcc
atccccgatagcaggaagagtctgaagtgtgtgtactgccacaagaacaccaagcagatg
tgcggggcgtgtatccagtgttcccacgacaactgctccacctccttccacgtcacctgc
gcccacatcgccggtgtgctcatgaagccagccgattggccctacgtggtgtctgtcacc
tgccacaagcataagaagaccaatcacaaggcaagggtggggccaaggggggagttttct
cttggtcagaaggtaattggtcggaacatcgatggctggttctacccctgcaccatcatt
ggcatgacctcacaaaccttctacgaggtcaactacgatgacggctcctactgtgacaac
atcttccccgagaacgttgtgagtcacgactgtcttcgtaacggtcccccagagaccggc
gagctgacgttggtccacaacatggagggccaggcgctcaacgcctcctacgtcaaggat
cacgtgcacaagtactaccaggtggagttccaagatgagtcccagctgttactgaagcaa
acagagatccattcgctggagcaggacctgcccaagagggtctgcactcgcctggcaata
ccaacccaggaagcccttctgacaggagacgaaccacaggcagccaagaggcctcgcctc
cccgcccctcaccccacacctcaagcccccatggaccccggatgccaacccccagctaca
ggccctgtacctcacagtattacacctcacacacccagccatgctcctggtccctccaac
actgatatcagtgcccttaccctcacccaggctctggcaatacccatctccgagcccacc
ctcaccccaatgccaactctcactgatcctctcccagccctgtcggccctagccgcccct
ctgctgcccctctccccagccgttcacttccaggaccagggtgaagcttacacagccagg
tccgtgcccttccaggaccagggtgaagcttacacagccaggtccgtgcccttccaggac
cagggtgaagcttacacagccaggtccgtgcccttccaggaccagggtgaagcttacaca
gccaggtccgtgcccttccaggaccagggtgaagcttacacagccaggtccgtgcccttc
caggaccagggtgaagcttacacgcccagctccagctacgtgtcctacatggagacgctg
ctcaatacacacttcccccctcaggaagatggccccgggcccctgttttaa

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