Oncorhynchus kisutch (coho salmon): 109888516
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Entry
109888516 CDS
T09179
Name
(RefSeq) zinc finger protein GLIS1
KO
K09232
zinc finger protein GLIS1/3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109888516
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
109888516
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
FOXP-CC
zf-H2C2_2
Zap1_zf1
zf-C2H2_8
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
109888516
NCBI-ProteinID:
XP_031678292
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Position
LG4:complement(12029686..12192155)
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AA seq
1008 aa
AA seq
DB search
MHTGNTEIPMQKSSALFGMVSHRQTPVYSDFTGLTLSMYSSKSDFCARRIGNDGFGTQTC
RIPHHNPSHCPSPKRLTTPEERYGSQEKGHLTAKATRACFSLSPEQVNGGCSGAYCPEKE
SGSDLRGSEGTLMRCGQSGKSVAMPPGCQPGPGGHYDSVHCDRPTPTHTLHLQDRQQQHA
DARSSAFQRSLASPGPGCGTSNATRAFPLPYPIKQEASMGYTISLGLGVPTPTQGGFQSG
TGGIGVRREEMEGPLSGGSCGGNLGSALSVDPFNNEDDSSPLSLSQGGSRHSARLLTNSS
VKRRCLSLASQSAAASSNANALANAVVTATEGIDITAIICSSQMSVVACVNGLRTNPSPQ
PSGGFSFRAAPRKPLPPQQCSSPQQTSLRESCQLPSPATCLLSLSSSSSSSSVSSLEPEQ
QTQGLCEGPGSMQPRPGGGAGGGSEGLGLLMSGTLMTGGLLGDVSLLEGGCQRAGCGALK
QEPLDDFSPSEEELFQHHYHHHHHLTGRAAASHLRPHPHHPALPLPSMPPPYHLHQYGGP
SPGGLLHLQNQNQTVSASSCILPGPKTSGSAEGEDGGPLSDKQVCRWIDCSAMYEQQEEL
VRHIEKVHIDQRKGEDFTCFWASCIRRYKPFNARYKLLIHMRVHSGEKPNKCMFEGCNKA
FSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPYACQIPGCTKR
YTDPSSLRKHVKIHSAKEQHVHRKLRPFPHLEQDVLSECLSVQHLQGSAPSQHQHLNCPT
PAQQHLFNGKDGRSLGLGQDIFTGLYTGSSTPHHCVSMELLSPGPAPTTGSASAPDLPPR
QSRLERDLSSPHSLSPLSTMESTRDGVSGPLLSPGMKGTGTSPPPLEKQQQHLHPHHKPY
SHYHQQAVSDDYQGSFQSCFHFGDSYRMEQSVSGVHVPADSHCYTSHQNNGFHMSSTSSG
SAAGFSLAQDLQGSGECQFSSSPEESIFFQVNSFDRSLSQMSSVYTET
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgggaacactgaaattccaatgcagaaatcctcagcacttttcggaatggtg
agtcaccgccaaaccccagtgtattcagacttcaccgggctgactctctccatgtacagc
agtaagtcagacttctgcgccagacgcatcgggaacgatggttttggaacccagacctgc
cggatcccacatcacaaccccagtcactgtccgagtccgaagcggctcaccacgccagag
gagcgctatggctctcaagagaaaggccatctgacagccaaagctacccgcgcgtgtttc
tctctctccccggaacaagtcaacggtggttgcagcggtgcctactgcccagagaaggag
agtgggtcagatctgcggggcagtgagggcacactgatgcgctgtggacagagtgggaag
agtgtggccatgccaccggggtgccagccaggtccagggggtcactacgacagtgtccac
tgtgaccggcccacacccacacacaccctccatctgcaggaccgccagcagcagcatgcc
gacgccaggtcctctgccttccagagatccctggcctcgcccggcccaggctgcggcacc
tccaacgcaaccagggcatttcctcttccctaccccatcaaacaggaggcttccatgggc
tacacgatttccctgggactgggggtccccacccccacccagggtggcttccagagtggc
acgggaggcattggggtccggcgggaggagatggagggtcctctcagtggtggaagctgc
ggcggtaacttaggcagtgctctgtcggtggacccttttaataatgaagatgactcctcc
ccactgtctttgtcccagggtggctctcgtcattcagcgcggctgctcaccaatagcagc
gtgaagagacgctgcctgtcgctggcctcccagtccgccgctgccagcagcaacgctaat
gccttagcgaacgccgtcgtcactgccactgaggggatcgatatcaccgccatcatctgc
tcctcccagatgtccgtggtggcctgcgtcaacgggctccggacgaacccctcaccccag
cccagcggcggcttctccttccgggctgccccccgcaagcccctgcccccgcagcagtgc
agcagcccccagcaaacctccttgcgagagagctgtcagctgccctcacctgccacctgc
ctgctgtccctctcctcgtcgtcgtcctcctcctccgtgtcatctctggagccggagcag
cagacccagggcctgtgtgaggggcctggctccatgcagccgaggcctgggggtggagca
ggaggaggctctgaggggctggggctgctgatgagtgggaccctgatgacaggagggctg
cttggggacgtgtccctgctggaggggggctgtcagagggccggctgtggagctctgaaa
caggagcctctggacgacttctcccccagcgaggaggaactctttcagcaccactaccac
catcaccaccacctgactggccgtgctgcggccagccacctccgccctcacccccaccac
ccagccctcccactaccctccatgcccccgccctaccacctgcaccagtacgggggcccc
agcccggggggcctgctgcacctccagaaccagaaccagactgtatcagcatcttcctgc
atccttccaggacccaagacctcgggctctgctgagggtgaggacggtgggccgctcagc
gacaagcaggtgtgccgctggattgactgcagcgcgatgtacgagcagcaggaggagctg
gtgaggcacatcgagaaggtgcacattgaccagcgcaaaggggaggacttcacctgcttc
tgggccagctgcattcgccgctacaagcccttcaacgcccgctacaaactcctcatccac
atgagagtccactcgggagagaagcctaacaagtgtatgtttgagggctgcaacaaggcc
ttttcccgcctggagaacctaaagatacatctacggagccacacgggggagaagccctac
ctgtgccagcaccccggctgccagaaagctttcagcaactccagcgaccgggccaagcac
cagcgtactcacctagacacgaaaccgtacgcatgtcagatccctggctgcaccaaacgc
tacacagaccccagctctctacgcaaacacgtcaagatccactccgccaaagagcaacat
gtgcatagaaagctgaggccgttcccccacctggagcaggacgtcctgagtgagtgtctg
tcggtgcagcacttgcagggctccgccccctcccagcaccagcaccttaactgccctacc
cccgctcagcagcacctgttcaacgggaaagacggccgctcccttggactgggacaagac
atcttcacaggcctgtacactggctccagcaccccccatcactgtgtttcgatggagctc
ctctccccaggaccagcccccaccactggctcagcctctgcccctgatctgccccccagg
cagtcccgcctggaacgggacctgagcagcccgcattctctgtcccctctgtccaccatg
gagagcacacgcgatggcgtgtcaggtcctctcctctccccagggatgaagggtacaggc
acttcccctcctcctctggagaagcaacagcagcacctccacccccaccacaagccctac
tctcactaccaccagcaggctgtcagcgacgattaccagggcagctttcagagctgcttc
cattttggagactcgtacagaatggaacagtctgtgagtggtgttcatgtaccagcggat
tcacattgttacacttcccaccagaacaacggcttccacatgtcgagtactagcagtggc
tctgctgcaggcttcagcttggcacaggacctccaaggatcaggggaatgccagttctcc
tccagcccagaggagagcatcttcttccaggtgaacagcttcgaccgcagcctgagtcag
atgtcctccgtctacacagagacatag
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