Oncorhynchus kisutch (coho salmon): 109888551
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Entry
109888551 CDS
T09179
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109888551
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
109888551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
I-set
CarboxypepD_reg
TSP1_CFP_C
Ig_2
CarbopepD_reg_2
TSP1_spondin
TTR_TEN1-4
TSP1_ADAMTS
ig
Motif
Other DBs
NCBI-GeneID:
109888551
NCBI-ProteinID:
XP_020335304
Ensembl:
ENSOKIG00005008001
LinkDB
All DBs
Position
LG4:20728091..20759142
Genome browser
AA seq
1253 aa
AA seq
DB search
MWDVTKVSLLLSFLVAVAAAQGPFRNSSLLRKWSQTDRSRKLAYNLLTEPQQTTGVTEWT
SWFNIDHPGGNGDYERLEAIQFYYRERVCARPVAMEARTTDWLAAAETGEVTHSSLEKGF
WCINKEQPYGRICSNYYVRFQCPPVQAYWMDWSAWGPCSATACNDVGIQVRQRKCMSIQP
MPLLLVPPCQGPQTERMECATLPCEAKWTQWGTWGACSVTCGKGRRIRRRSCVRTSITVQ
CVGRAAEIQKCGKYPCPTKCKRECPDGRPSEDCSRCVCVGHMLQGEVLSMTGVPVMGARI
ALASRPKIIRTRTDDKGLFRLPGVCSSSPSQLYIRKEKFAPATASTSSNSSGSSWVRAVL
KYAEKPYIVKHPEDKVRYEGQRVMLCCKAAGEPMPDKYYWYHNRTLLDRNVFKYEEDLVL
RDLKPEQTGHYYCKASSQTGSIKSSQAFLSVIAKGMPACNPTPKNHLIRLPMDCVQPGTD
SKLYNAGRCTHNKCVGSLDFDLRCRDGGDYCCGVQKMESRVINCGSYSLPIKAVTECGCL
KCVVPKVLVRGRVVTVDNDEPLRFGHMYVGKERVGTTGYKGGFTLNITPDTERLVVNFVD
PTEKFIDTPKVFIFDKRGGSVYHDVKVMRKQEPIYINAGETNTIDLGEIKGEDPIGQIVI
PPNSFHKKNGEVYEGTVKASVTFIDPRNITTAAAAPGDLNFVDDEGDMLPLRTYGMFSVD
FRDDTNQEVLGAGAVQVLLDTQHVKMQEHIPKMKLWSLNPDTGVWEEESDFHYTQTTSGG
NGRRKREERTFLIGNMEIRERRLFNLDVPENRRCYVKVRTYMSDKFLATEQLEGVVISLI
NLEPKPGFSSNPRAWGRFDSVITGHNGACLPAFCDAQVPDAYTAYVTGIMGGEELEAAPS
TPKMNPNIIGVSQPYLDKIDYQRSDHNDPALKKTAFRINLAKPNPNNLEETNGPIYPYQS
LISCENAEVNANHFRFFRVEKDKYEYNVVPFQENDLTSWTGDYLSWWPNPQEFRACFIKV
KIQGQREVMIRSQNHGGTHPETAGQLYGIRDIRSTRDMHVANISAACLEFKCSGMLFDQA
TVDRSLISVLPQGNCRRVGVNSLLKEYLTKHPPTSLNNESHAFNMLAPVDPLGHNYGIYT
VTDQNPRVAKEIAIGRCFDGTSDGFSREMKSDTGVALTFSCPERTLTRESLFQRLQTNPS
QTLSQMARDMREAQGLQVRGRSSRVVTYPSESTSRRSSSSSRRRSMMRTQDRQ
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgtgggacgttacaaaagtgtcactactcctgtctttcctggtggcagtggcagcggct
caagggcccttcaggaacagctctctgctcaggaagtggagtcagacagacaggagcagg
aagctggcctacaacttgctgactgagccacagcagaccacaggcgtgactgaatggacg
tcctggttcaacatcgaccatccaggggggaatggagactacgagcggttagaggccatc
cagttctactacagggagagggtgtgtgcccggccggtggccatggaggcccgcaccacg
gactggttggcagcagcagagaccggggaggtgactcactccagcctggagaagggtttc
tggtgcatcaacaaggagcagccctatggacgcatctgctccaactactacgtccgcttc
cagtgcccaccagttcaggcctactggatggactggtctgcctggggcccctgctctgct
acagcctgtaatgacgtgggcattcaggtccgtcagaggaagtgtatgagcatccagccc
atgcccttgctactggttccgccatgccaggggccccagacagagaggatggagtgtgcc
accctgccatgtgaagccaagtggactcagtggggtacgtggggagcatgctcagtgacc
tgcggcaagggtcgcaggatcagaaggaggagctgtgtgagaacctctataacagtgcag
tgtgttggacgagcagctgaaatccagaaatgtgggaaatatccatgcccgaccaaatgt
aagcgtgagtgtcccgatggccgtcccagtgaggactgtagccgctgtgtgtgtgtgggc
cacatgctccaaggagaggtactaagtatgaccggtgtccccgtgatgggggccaggata
gcgctggccagccgacccaagataatccgtacccgcactgacgacaaaggcctcttcagg
ctcccaggggtctgctccagttcccccagccagctctacatcaggaaggagaagtttgcc
ccggccactgcatccacctccagcaacagcagtgggtcatcctgggtacgggcagtccta
aagtacgcagagaagccatacattgtaaagcacccagaggacaaagtgcgctatgaggga
cagcgtgtgatgttatgctgcaaggcagcaggggagcccatgccagacaaatactactgg
tatcacaataggaccctattggaccggaacgtgttcaaatatgaagaggatctggtgctg
agagacctgaagcctgagcagacaggacattactactgtaaagccagcagccagacagga
agcatcaagtcctcacaggcattcctcagcgttatcgctaaaggcatgccggcatgcaac
cccacacctaagaaccacctcattaggctgcccatggactgtgttcagcctgggactgac
tctaagctctacaacgctggccgctgcacccacaacaagtgtgtaggctccctggacttc
gacctgcgctgcagggatggaggtgactactgctgcggggtccagaagatggagagccgg
gtgatcaactgtgggagctacagcctacccatcaaagctgtgactgagtgtgggtgcctg
aagtgtgtggtgcccaaggtgcttgtgcgtggcagggtggtcacagttgacaacgatgaa
ccactgcgtttcgggcacatgtatgttggcaaggagagagtgggcaccacagggtacaaa
ggaggtttcacgctcaatataaccccagacacagagaggctagtggtcaactttgtggat
cctacagaaaaattcattgacactcctaaggtgtttatctttgataagagagggggctct
gtttaccatgacgtgaaggtgatgagaaagcaggaacctatttatatcaatgctggagag
acaaataccattgacttaggagaaatcaaaggagaggaccccattggacagattgtcata
cctccaaattctttccataaaaaaaatggggaggtgtacgaaggtacggtgaaagccagt
gtcaccttcattgaccccaggaacatcaccacagctgctgcagcgcctggtgatctcaac
tttgtggacgatgagggtgacatgcttccactgaggacatatgggatgttttccgttgac
ttcagagatgatacgaaccaggaagtcctaggggctggagcggtccaagtactcctagac
acgcagcacgtcaaaatgcaagaacacattcccaaaatgaaactgtggtccctcaaccca
gacacaggtgtctgggaggaagagagtgactttcactacactcagaccacatctggtggt
aatggacggcgcaagcgagaggagcgcactttcctcataggtaatatggaaatcagggag
cgtcgacttttcaacctggatgtgcctgagaaccgccgctgctacgtcaaagtgaggaca
tacatgagtgacaaattcctggccactgagcagttggaaggtgtggtcatcagcctgata
aacttggagcccaagcctggcttttcctctaaccccagagcatggggtcgctttgacagt
gtgataactggacacaacggagcctgcctgccagccttctgtgatgctcaggtgcctgat
gcttacacagcttacgtcacaggcattatgggtggtgaagaactggaagcagctccctca
acccccaagatgaacccaaacatcattggagtgtctcagccatatttagacaagatagac
taccagcgttcagaccacaatgatccagctcttaagaaaacagcattcagaatcaacttg
gcaaaacccaaccccaataatttggaagagaccaacgggccaatatacccctaccagagt
ttaatatcctgtgaaaatgctgaagtcaatgccaaccatttccgattcttcagagtggaa
aaggacaaatacgaatataacgttgtgccctttcaagagaacgacttaacatcatggaca
ggtgactacctctcttggtggcccaaccctcaagagttcagggcttgcttcatcaaggtc
aagatccagggacaaagggaagttatgattaggtcacagaaccatggaggcacccaccct
gagactgcaggccagctgtacggcatcagagacatccgcagtacccgcgacatgcacgtg
gccaacatctcagcagcttgcctcgagttcaagtgcagtggtatgctcttcgaccaagcc
acagtcgataggtccctcatatcagtcctcccacagggcaactgtcggagagtgggcgtc
aacagcctcttaaaggagtatctgaccaagcacccccctacctcactgaacaacgagtcc
catgccttcaacatgctggctccagtcgaccccttggggcacaactatggcatctacaca
gtcacggaccagaacccaagggtggcaaaagagatcgccattggacgctgttttgacggt
acctctgacggcttctccagagagatgaagtcagacactggggttgctctgaccttcagc
tgcccagaaaggactttaaccagggagagtctcttccaacgcctccagacaaaccccagc
cagaccctgtctcagatggcaagggacatgagggaggcgcaggggctgcaggtccgagga
aggtcctcccgggtagtgacctacccctctgaatccacgagccgcagatccagctcctct
agcaggaggagatctatgatgcggacacaggaccggcagtag
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