Oncorhynchus kisutch (coho salmon): 109888630
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Entry
109888630 CDS
T09179
Name
(RefSeq) sphingomyelin phosphodiesterase 3-like
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00600
Sphingolipid metabolism
oki01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
109888630
Enzymes [BR:
oki01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
109888630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
nSMase_N
Exo_endo_phos
DUF4131
Motif
Other DBs
NCBI-GeneID:
109888630
NCBI-ProteinID:
XP_020335381
Ensembl:
ENSOKIG00005033407
LinkDB
All DBs
Position
LG4:23844701..23893271
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AA seq
675 aa
AA seq
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MVLHTSPYSSAFLRCLSSLSWGFIFPCYWLLDRLLSSCVATSLEKRRRSQDPCSFVTLYV
LVSTPLYLLLLLASLPFALLGFLLWATLQAARHPYLYTHRRPDKHQAEQGCVASLADWRP
QGRSFCFGSSNVCLLPDSLARFNNLSETQRRASEVGKRIRNGASRPQIKIYIDSPTNTSI
SATSFSSLVTGFRRTSSLGQRPDNTPEAETEPVTDCPIHTAGSDCPIHTTGPNCPIHTAG
ADCPIHSKGDQGSSDCPVHVAGGEDTPECPLHTAGSQNNSDSPLHTTGAQNSPDCPMHAS
GVQISISAPEPDPPEAGTGSHQGEGDAESLTGGVSSNNTLSHRTSMFKKHTGRKRRQGDD
GFDHEISAFFPANLDFLCLQEVFDHRAMSRLRQQLHHYFPYILSDVGRYAWKGCCSRFKF
LNSGVMMASRYPILDAHYECYPNGRGEDALAAKGVLFVKVQVGTSHQEQRVVGYLTCTHL
HAIEGDAAVRCEQLDLLLVWGAEFRKMTSRPSEEKGLEDQVAFDVVLGDLNFDNCSSEDK
LEQQHAVFTQYKDPCRLGPGEDKPWALGTLLDTSGLYDEEVSSPESLQKVMENEEGRKEY
LVFPTNKNHCPNQKGRKIPLKGNGRRIDYILYREEVQQDWKVDIEEFSFITQLAGLTDHL
SVAMRLAVSTGEEEP
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggtcctccacacctctccctactctagtgccttcctacggtgcctcagcagcctgtca
tggggcttcatcttcccctgctactggctgctggaccgcctgctgtcctcctgcgtggca
acctctctggagaagcgtcggcgctcccaggacccctgctccttcgtgactctgtatgta
ctggtgtccaccccgctctacctgttgctcctcctggcctcgctgcccttcgcactgctg
ggcttcctgctgtgggctaccctgcaggcggcccgccatccctatctctacacccaccgc
cgcccagacaagcaccaggccgagcaggggtgtgtggcgtcactggccgactggaggccg
cagggccgcagcttctgcttcggcagttccaacgtgtgcctactgccagactccctggca
cgcttcaacaacctgtctgagacccagcgccgtgccagcgaggtgggcaagcgcatccgt
aacggggccagccggccgcagatcaagatatacatcgactcccccaccaacacctccatc
agcgcaacctccttcagcagcctggtcacagggttccgacggacatcctccctgggccag
cggcccgacaacacacccgaggccgagaccgaacccgtaaccgactgcccaatacacact
gcaggttcagactgcccaatacacaccacaggtccaaactgccccatacacactgcaggt
gctgactgccccatacactcaaaaggggaccagggctcctcagattgtcccgtccatgta
gctggtggagaggacacaccagagtgcccccttcacactgctggttctcagaacaactct
gacagtccactgcacaccacaggggcccagaactccccagattgccccatgcatgcctca
ggggtccagatcagtatcagtgccccagagccagaccccccagaggccgggacagggagt
caccaaggggaaggtgatgcagagagcctgacagggggggtgtcttctaacaacaccctg
tcccaccgcacctccatgttcaagaagcacacgggtcgcaagcggcgccaaggcgacgac
ggattcgaccatgagatctctgccttcttccctgccaacctggacttcctgtgtctgcag
gaagtgtttgaccaccgggccatgtccaggctgaggcagcagttgcaccactacttcccc
tacatcctgagtgatgtgggccgctacgcctggaagggctgctgctcccgcttcaagttc
ctgaacagcggcgtcatgatggccagccgctatcccatactggacgcccactacgagtgc
taccccaacgggcgaggggaagacgccctcgcagcgaaaggagtcctctttgtcaaggtg
caggtaggcacctcccatcaggagcaaagagttgtgggatatctcacctgcactcatctg
catgccattgaaggagatgcagctgtgcgttgtgagcagttggatctgctcttggtgtgg
ggggcagagttccgcaagatgacgtcccgcccctcggaggagaagggtctggaggaccag
gtggcctttgatgttgtcctcggcgacctcaatttcgacaactgctcctcagaggataaa
ctggagcagcagcatgccgtcttcacccagtacaaagacccatgtcgcctggggccaggg
gaggacaagccttgggctctgggtacactactggacaccagtgggctttatgacgaggag
gtcagctcaccagaaagtttacaaaaagtgatggagaatgaggaggggaggaaggaatac
ctggtgttccccaccaataaaaaccactgtcctaatcagaagggcagaaaaatccccctg
aaaggcaatgggaggaggatcgactacatcctttacagagaggaggtgcagcaggactgg
aaagtggacattgaagagttcagcttcatcacccagctagccggcctcactgaccacctg
tctgtggccatgcgtctggctgtgtccacgggagaggaggaaccttag
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