Oncorhynchus kisutch (coho salmon): 109888654
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Entry
109888654 CDS
T09179
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109888654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109888654
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
109888654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
109888654
NCBI-ProteinID:
XP_020335408
Ensembl:
ENSOKIG00005001230
LinkDB
All DBs
Position
LG4:27192087..27210190
Genome browser
AA seq
229 aa
AA seq
DB search
MSVVPPNRPSTGWPRRGLNQFENKYISPPSKPVTLERTINLYPLTNYTFGTKEPLYEKDS
SVAARFQRMREEFEKVGMRRAVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNAGEDEV
DGLKRLMTEILGRQDGVKQDWVIDDSIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQ
LQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgtacctcccaaccgaccttcaaccggttggccacgccgtggactgaaccag
ttcgaaaacaaatacatcagcccgccttccaaacctgtcacgctggagagaaccatcaac
ttatatcccctcacgaattacacgtttggcacaaaggaacctctctacgagaaggatagc
tcggtagcggctcggttccagaggatgcgcgaggagttcgaaaaagtaggcatgaggcgg
gcagtggagggtgttctgatcgtacacgagcaccggctaccacacgttctactgctgcag
ttggggacaacctttttcaaacttcctggtggagaattgaatgcaggggaggacgaagtg
gatggactgaagcgattgatgacagagatcctggggcgtcaggatggagtgaagcaggac
tgggtgatcgatgactctattggaaactggtggagacccaactttgagcccccacagtac
ccctacatcccagcacacattaccaaacccaaagagcacaagaagctatttttggttcag
ttgcaggaaaaagcactgtttgcagtgcccaagaactataagctggtggctgcccctctc
tttgagctgtatgacaatgccccaggctacgggccaatcatatccagtctcccacaactg
ctgagtaggttcaacttcatatacaattaa
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