Oncorhynchus kisutch (coho salmon): 109888740
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Entry
109888740 CDS
T09179
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109888740
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
109888740
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
fn3
Ig_2
LRR_5
C2-set_3
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
109888740
NCBI-ProteinID:
XP_020335499
Ensembl:
ENSOKIG00005013894
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All DBs
Position
LG4:complement(55014751..55024603)
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AA seq
652 aa
AA seq
DB search
MWAKMFLVFFLGLYLATVAFPSSVSACPSQCSCFFHNLSDGSKSRSVICNDPEISLVPAN
FPVDTSKLRIEKTAIQRIPSEAFNYLRNLEFLWMSFNVLSALNSDSFRGLLDLEELRLDG
NALISFPWESLMDMSSLRLLDLHNNRLTSVPADATMYIKNLTYLDLSSNNLLTVPAEVLA
TWLTVKSSHGPDSSKMILGLHDNSWVCDCRLYDLIQFQKSPTLFVALIDTRLRCSAPESL
SGVLFSDAEVRRCQAPRIHTAVARVRSTLGNNVLLRCGTIGIPSPDLAWRRADGKALNGT
VQQENSKEGIVWSILSVPAVSYRDSGKYVCKANNYAGNAEAVISLVISEAPPKPDNNNNL
TSVVAAAVKKIKVKKPNGIGKAAYQEKLVARVGVPTTSPPPPLVVLDSSPVPEGVGSVAD
RAIPGPTTLPSPDGLLELEKTNLSNLAQAQYDPDRIVRSVKVLGDTENTITLNWRAPKAK
NTTAFSVLYAVFGERDMRKINVAVGQNRVFIEGLVPKTKYIACVCVRGLIPKKEQCVIFS
TDEAASAAGTQKLINVIVITVACVIAVPLTVIVCCGALKRRIQKMWGKKSKDIQDSYVTF
ETLSPGTKAKGLDGEYLTRLNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtgggccaaaatgttccttgtgttcttcctgggactctacctggcgacagttgcgttt
ccctcctcggtgagtgcgtgcccgtcacagtgcagctgtttttttcacaacctaagtgat
ggatctaagtccaggagtgtcatttgcaacgaccctgagatctcccttgtgcctgccaat
ttccccgtggacacgtccaagctgcgtatcgagaaaacagccatccaacggatcccaagt
gaagccttcaactacctccgaaatctggagttcctttggatgtcctttaacgtgctgtcc
gctctcaactcggacagtttccgtgggctgctagatctggaggagctgagactggatggg
aatgccctcatttcgttcccctgggagtctcttatggatatgtccagcctcaggctgctg
gacttgcacaacaaccggttgacctcagttcccgcagatgccacaatgtatataaaaaac
ctgacctacctggatctgtccagcaacaaccttctgactgtcccggccgaggtgctagcc
acttggctaacagttaaatcttcgcatggcccagatagctccaaaatgatacttggtctc
catgacaactcctgggtgtgtgactgccgcctgtacgacctgatccagttccagaagtcg
ccaacgctcttcgtggcattaatcgacacgcgcctccgctgctccgcccccgagagcctg
tcaggtgttctgttcagcgacgccgaggtgcggaggtgccaggcgccgcgcattcacaca
gcagtggcgcgagtccgcagcaccttgggaaacaatgtgcttctgcgctgcgggaccatc
ggcattcccagtcctgatctggcctggcggagggcggatgggaaagccctgaatgggaca
gtccagcaggagaactccaaggaaggcatcgtctggtcaatcctcagtgtcccggccgtg
tcctaccgtgactcagggaagtatgtctgcaaagccaataactacgccggcaatgccgag
gccgtcatctccctagttatctctgaagcacccccaaaacccgacaacaacaacaaccta
accagcgtggttgctgctgccgtaaaaaaaatcaaagtcaagaaacccaatgggataggg
aaagcagcataccaggagaaactggtggctagggtaggggttcccaccaccagccctcca
cccccacttgttgtgttggactccagccctgtgcctgagggtgtggggagtgtggcagat
agagccatccctggaccaaccactttgcctagtccagacggactcctggagctggagaaa
accaacctgagcaacctggcccaggcccagtatgacccggaccggatagttcgctctgtc
aaggtgttgggcgacacagagaacaccatcaccctgaactggcgggcacccaaggccaag
aacaccacagctttcagcgtgctctacgctgtcttcggtgagcgggacatgcgcaagatc
aatgtggctgtgggccagaatcgcgtcttcatcgagggcctggtgcccaagaccaagtac
attgcttgcgtttgcgtccggggcctgatccccaagaaggagcaatgtgtcatcttctca
accgatgaggcggccagcgcagccggcacccagaagctcatcaacgtcatcgtgatcacg
gtggcgtgcgtcatcgccgtgccgctcaccgtcatcgtgtgctgtggcgcactcaagagg
cgcatccagaagatgtggggcaagaagtccaaggacatccaggattcgtacgtgactttt
gagacgctgtcccccgggaccaaggctaaagggttggatggtgagtacctgaccagactc
aaccctgaggagtccaaccgactgctgtcggcccgctccagtctggactcagaggccacg
gctaagatagagggacagcccaacgagtacttctgctga
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