Oncorhynchus kisutch (coho salmon): 109888910
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Entry
109888910 CDS
T09179
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta-like
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109888910
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109888910
Enzymes [BR:
oki01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
109888910
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
109888910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
PTP_tm
Fn3_Dep-1_4th
CysR_MRC2_N
Ricin_B_lectin
Tc-R-P
Motif
Other DBs
NCBI-GeneID:
109888910
NCBI-ProteinID:
XP_031677456
LinkDB
All DBs
Position
LG4:47444992..47488150
Genome browser
AA seq
3137 aa
AA seq
DB search
MDTLFFLIFILFRCTSSNSFLIVHTPKKLCLSTHKTTVILGKCNVASPYQQWEWTNDMKL
HHTQSSKCLWANTSSAIPLHARLASIINCDSAHAWKCYDKQGTFGLAEEPMYLKKQGTRV
VIRGDPRYSNWTKHEEVDSGGGQVMTHLCSRKGSTTISTTRMYSSTHKPVAYTSTVHAIR
TVPVTAINTHSSSNAMNTHRRTTRQISTLRVPITTPNNAVTYESMVATHTYDLVKTQTMG
FIPRSVSTVITASGTALNDSHDFIWSSPALSTTDSAMDETVNAATENALLDSRNGAKIPS
VNQATSSSTPPNVDELVSTASTTTVVSSTISSVPNSSAMTDSPTTSASVVITSDAKVPTS
VALTTPTPDSISNSSATTTPTDTTTLSTTRKVPPRKTVVPSTTKTTTMQTTTTAAPPTPT
TSAVGQTTMTTANPIIKVASPTTAIASPTITSTLPTTSSAPPTTFSTSPITSSTIKITAK
TTKKIAPPTTSTAPPTIISTLPTTSSAPPTTSSTSPITPSTIKITAKTTKKIAPPTRSTA
PPTITSTLPTTSSAPPTTSSTSPITSSTIKITAKTTKKIAPPTTSTSPPTITSTLPTTSS
APPTTSSTSPIISSTSPTTPPITFTNAPPMTTTMPPTTTTNLPTTTKTLATTTATTSTTT
ATTPTTTATTRTTPATTPTTPTTTTTTTTTPTTTTTTPTTTVTTTTATTPTTTTPTTTTT
TLPTTTPTTTTTTPLTTTPTTTTTTPTTTKTTPTTTIAPLTTTKTTPTTTKTTPTSTTTT
PTTTTITTPTTTIAPLTTTTTTPPTTKTTPTTTISTTTTPTTTIAPFTTTTTTLPTTKTT
PTTTTPTSTTTTTTPTTTTTTPPTTTTTPTTTTTTPTPTTTTTTPTTTIAPLTTTTTTPP
TTKTTPTTTTSTTTTPTTTTHPTTTATPTTTKTKTTPTPTTTTTTTSTTTIAPLTTTTTT
PPTTKTTPTTTKTTPTTTTSTTTTPTTTTTPTTTIAPLTTTTTTTPTSTTTTTTPTTTTT
TTTPPTTTPTTTTTTPTTTKTTPTSTTTTPSTTIAPLTTTTTTPPTTTATPTTTTTTTTT
PTTTTTTTAPPTTAPAPTTTTTVLTTTTELTTTPQVETTEAVKCSFNLTKTSANADSIAL
ELITTGEACNFTVFYEPSRSDITDCYQHGEYTNVYICDIRDLEPGTLHQFEVISNNDGER
GNVSVRTDPVSPSRLDVLPDQIQATQYKSPIQGQGGSHSLHISWPRSRGQVDWYEVTLQD
TKTGTSRSTRIMGTAATQSRFTALTPGTLYALSLVATAGNKTALPVLATAATAPSAVSGL
QLSPSSSSLGVSWQPGPGRREGFRVLLREQQGALVRNVTLKSSVTSHTLDDLLPGTLYTV
TVVTEAVGLQNAISKQAVTVPVAVTELFLENHGSLDTLRASWVNARGGVDAYLVSLATQG
SANQDRKLPPNATEVVFSGLTPGRPYQVTVRSKVGEQTTEAVATGRTVPAKVSQLSMVGV
IDGSTLKSTWLPPRGDWENYRVLLLNGTVALVNETVSRLVRQYSFSVASLGLVPGRLYTA
QVMVESGLFGNTAQCQGRLAPQPVQQLMVRHGDETSLSVLWSRPAGVWDGYTVVLRQGDT
VVSQRTLSRDARECTFNVLMPGRQYAIAVTTNSGGLNSSASVIGRTTPAQVTSLRVTNGG
STDSLQTQWERAAGELDSYRVLLIHDSSVIKNESTPAHTTAYSFLALKPGALYRVVVTTV
RAGQASRQSVAEGSTVPAAVGEVTVSNNGRMDFLSVSWRPAQGDVDSYLVTLKDRERTVH
TLVVSKSSPECVFKSLVSGRLYNISIVSRSGVYENHTIVQERTQPSSVQNPTAIHSARDD
YLKVYWRHAAGDFDYYQVVIKHNNLFHQNKTVMKSQNECVFNGLVPGRLYTVIVSTWSGK
YETSVSTDGRTFPAAVRSLALAGRGTEDLRVAWLAALGDVDHYEVQLLFNDMKVFPPITL
GSSAGACVLSSLTPGRLYKIHVSTFSGPNQRAQFIEGRTVPSKVKNIHVSNNGQSNSLKI
SWTPGQGDVDSYSVSLSLDGPEGRMLETRPVPKHPNQLGFNSLQPGQLYSVTVRSISGIL
LNNNTASGRTVPSAVTGLQADNRHTTCSIQVSWQEARGVADGYSLQLLDDRGHLVTNSSQ
ASSGSTPLQHHFDGLTPGKRYHVLVHTTSGGVHSEGVTAEARTRPAAVSNLSIQANSSSS
LSFHWSPPEGELEGYDLYLYNGDDTLYDRRSGQPKTLQVSFQGLRPGAPYRMVVLTRSGE
QTNDSAIWARTVPAAVTSLQARSHPQAEELWVSWERAEGELSGYLLSLYNPDGSQQAEEA
LGPDATEYAVPTLIPGRLYLAVILTRSGELTNRATTQGRTAPRPPTSVSFGGVTNTSLEL
TWSGPAGSDYDDFDLQWEPRDHLSVFNPYHTRTSGSRILKGLYPGRLYNFSLRTVSGAVG
GVGEDGSPAYSLPIHKSIRTKPERVQYLHCRPQNSTSISCSWGPPEADCDSYTIECLHQD
SRTLVYSRRTGRDSTLYHITQLEPHKRYTVSIKAISDSMTSEAAEDSVVTMIDRPPLPSL
STRVNNSAALITKNTIFFKFNCSWFSDINGAVKFFTVVVTESENNENIQPEQHHPLPSYL
DYKLNSSVKAYQTSYFPSRCTEGSDSETQSFAISLGTGMDTLGGACDHLQAQDREQDPDK
HRDHPFCDGPLKPKTAYRLSVRAFTQLFDEEQSRYTPPLYTDTYLSLPLVTEAEPLSGVI
EGISAGMFLIVMMVGVTALLICRQKVRKVVQERRVVRLSMRRERPTSGVHMGVRGNRRIS
SPVKIMHFESHYTKLQADSNYLLSEEYEDLKDVGRNQPLDTALLPENRGKNRYNNILPYD
LTRVKLSYVDDDPCSDYINASYIPGNNFRREYIATQGPLPGTKDDFWKMVWEQNVNNIVM
VTQCVEKGRVKCDHYWPFDQEPLYYGDLIVQMLSESVLPEWTIREFKICSEDQLNYSRVV
RQFHYTVWPDHGVPETTQSLIQFVRTVRDYVNRTPGSGATVAHCSAGVGRTGTFISLDRV
LQQLDTKDTVDIYGAVFDLRLHRSHMVQTECQYAYLHQCMRDVLRARKLRSEQENPLYPI
YENVNPDPQRDMVYARR
NT seq
9414 nt
NT seq
+upstream
nt +downstream
nt
atggatactttgtttttccttatatttatactttttcgatgtacttcttcaaacagtttc
cttattgtgcacaccccaaagaaactgtgcctgtctacccacaaaacgaccgttatcctt
ggaaaatgcaatgtcgccagtccctatcaacaatgggaatggacgaacgatatgaagttg
catcacacgcagtcgtcgaagtgtctctgggccaacacgagcagtgcgatacctctgcac
gctcgcctggcctcaatcatcaactgtgacagcgcacatgcctggaaatgttacgacaaa
caggggactttcggcttagcggaggagcccatgtacctgaagaaacaaggtacacgcgtt
gtgattagaggagatccgaggtattccaactggaccaagcacgaagaagtcgactctgga
ggaggacaggtgatgacacatttatgctcgcgtaaagggtccaccaccatctcaaccacc
agaatgtattcatccacgcacaaaccggtggcatacaccagcactgtccacgccatccga
acggtccctgtaacagccataaacactcactcttcatcaaacgctatgaacacccatagg
aggaccacccgtcagatctctacgttaagagttcccatcacaacgcccaacaatgcggtg
acctatgagtctatggtggcaacgcacacttatgacctcgtcaagactcagacgatgggt
ttcattcccaggtccgtctcaacggtcatcacggcatctgggacagctctcaacgacagc
catgattttatctggtccagtcctgctttgtccacaactgactctgccatggacgaaacg
gtgaacgctgccaccgaaaatgccctcctcgactcgaggaacggagccaagattccatca
gtaaaccaagcaacttccagttccacaccccctaatgtagatgagctggtgtcaactgcc
tctaccactactgtggtttcctctacaatttcctcagtgcccaactcaagtgctatgact
gattcaccaaccacttctgcatccgtagtcattacctctgatgctaaagtcccaacttct
gttgctttaactacccctacccctgattccatctctaattcttctgctaccaccacacct
accgataccacaacattgtccacaactaggaaagtaccccccagaaagactgtggttcca
tctacaaccaaaaccacaacaatgcagactacaacaaccgctgcccctcctactcctact
acttctgctgtcggccaaaccactatgactacagcaaatcccattataaaagtagcctca
cccacaaccgccatagcctcacccacaataacttccactctgcccacaacctcctcagct
ccaccaacaacattttcaacttcgcccataacatcttcaacaataaagattacagctaaa
accacaaagaaaatagccccacccacaacctccacagccccacccacaataatttcaact
ctgcccacaacctcctcagctccaccaacaacatcttcaacttcgcccataacaccttca
acaataaagattacagctaaaaccacaaagaaaatagccccacccacacgctccacagcc
ccacccacaataacttcaactctgcccacaacctcctcagctccaccaacaacatcttca
acttcgcccataacatcttcaacaataaagattacagctaaaaccacaaagaaaatagcc
ccacccacaacctccacatccccacccacaataacttcaactctgcccacaacctcctca
gctccaccaacaacatcttcaacttcgcccataatctcttcaacttcacccacaacccct
ccaatcacatttacaaatgccccacccatgaccactacaatgcctcccacaactacaaca
aacctgcccacaactaccaagactttggccacaactactgcaaccacatccacaactacc
gcaaccacacccacaactaccgcaaccacacgcacaactccagcaaccacaccaaccaca
cccacaactaccacaactactacaaccacacccacaactactacaaccacacccacaact
accgtaaccacaactactgcaaccacacccacaactaccacacccacaactactacaacc
acactcccaactaccacacccacaactactacaaccacacccctaactaccacacccaca
actactacaaccacacccacaactaccaaaacaactcccaccacaaccatagctccactc
acaactaccaaaaccacacccacaactaccaaaaccacacccacttctactacaaccaca
cctactactaccaccataaccacacccaccacaaccatagctccactcacaactactaca
accacacccccaactaccaaaaccacacccacaactaccatttctaccactaccactccc
actacaaccatagctccattcacaactaccacaaccacactcccaactaccaaaaccaca
cccacaactaccacacccacttctaccacaacaacaaccacacccactactaccacaacc
acacccccaactaccacaaccacacccacaactactacaaccacacccacacccacaact
accacaaccacacccacaacaaccatagctccactcacaactactacaaccacaccccca
actaccaaaaccacacccacaactaccacttctaccacaaccacacctaccacaaccaca
cacccaactaccacagccacacccacaactaccaaaaccaaaaccacacccacacctact
actaccaccacaaccacatccaccacaaccatagctccactcacaactactacaaccaca
cccccaactaccaaaaccacacccacaactaccaaaaccacacccacaactaccacttct
accacaaccacacctactaccacaaccactcccactacaaccatagctccactcaccact
accacaaccaccacacctacttctaccacaacaacaaccacacccactactaccacaacc
acaaccacacccccaactaccacacccacaactactacaaccacacccacaactaccaaa
accacacccacttctaccacaaccacacccagtacaaccatagctccactcacaactacc
acaaccacacccccaactaccacagccacacccacaactactacaaccacaactaccaca
cccactactaccacaactaccacagccccacccacaacagctccagctccaacaacaact
actacagtactgactacgaccacagagttgaccaccaccccacaggtcgagaccactgag
gcagtaaagtgttcatttaacctgacaaaaaccagcgccaatgcggattctattgcactg
gaattgataacaacaggagaagcgtgtaacttcaccgtgttttatgagcctagtcggtcc
gacataacggattgttatcaacatggggagtacactaacgtgtatatctgcgatataagg
gatttggaaccaggaacattacaccaattcgaagttatatcgaataatgatggagagagg
ggcaacgtatcagtgcgtacagacccagtgagtccatccaggttggacgtactaccagac
cagatccaagcaacccagtataagagtcctattcagggtcagggtggctcccatagcctg
cacatatcctggcctcgatctcgtgggcaggtcgactggtatgaggtcacactacaggac
accaaaacagggacgagccgcagtacccgcatcatgggaactgccgccactcagtctcgc
ttcaccgccctcacccctggaaccctctatgccctcagcctggtggcaacggctggaaat
aaaacagccctgccagtgctggccactgcagccacagctccctcagctgtcagcggcctc
cagctctcaccctcctccagcagcctgggtgtttcctggcagcccggtccaggcaggaga
gagggtttcagggtgctactgagggagcagcagggcgccctagtcaggaacgtcaccctt
aagagtagtgtcacctcccacacccttgacgacctgttgcctgggaccctgtacactgtc
accgtggtgactgaggctgtaggcctccagaacgccatctccaaacaagcagtcacagtt
cctgtggcggtaacagagctcttcttggagaaccacggcagtctggacaccctgagggcc
tcctgggtcaatgctaggggaggtgtggatgcatacctggtctccctggcaacccaaggc
tcagccaaccaggataggaagctaccccccaacgccactgaagtggtcttcagcggcctg
acccctggacggccctatcaggtgactgtgaggtcaaaggtcggagagcagacaactgag
gcagtggccacaggcagaacagtgccagccaaagtgtctcagctgtccatggtgggcgtc
attgatggcagcactctgaagagtacatggttgcccccaagaggggactgggagaactat
cgtgtcctgctactgaacggcacggtggctctagtcaatgagacagtgagcaggctggtt
agacagtactccttctctgtagcttccttggggctggtgcctggcaggctctacacagct
caggtcatggtggagagcggtctgtttggcaacaccgctcaatgtcaggggaggctagcc
cctcagcctgtccagcagctgatggtccgtcacggtgatgagacgtctctgagcgtgctg
tggtctcgtcccgcgggggtgtgggacgggtacaccgtggtcttgagacagggagacacg
gttgtgtcacagaggacactgtcccgtgacgccagggagtgcacattcaacgtcctcatg
cccggacgccagtacgccattgccgtcacgaccaacagtgggggcctaaacagctcggct
tcagtgattggacgaaccaccccggcgcaggtgaccagtctgcgtgtgaccaacggtggc
agcacagacagcctccaaacccagtgggagcgggcggccggcgagctggactcgtaccgt
gtgctgcttatccacgacagcagtgtgatcaagaacgagagcaccccggcccacaccacg
gcctacagcttcctggcgctgaagcctggagccctctacagggtggtggtcaccactgtc
agggccggacaagcctccagacagagcgtggcagagggaagcacagtccctgctgccgta
ggcgaggtgacagtcagtaacaacggtcgtatggacttcctcagtgtgtcgtggcgacca
gcccaaggcgacgtggatagttacctggtcaccctgaaggaccgcgagaggaccgtccac
accctggtcgtgtccaagtccagccctgagtgtgtgttcaagtccctggtgtctggacgg
ctctataacatctccatcgtctcccgcagtggagtctacgaaaaccacaccatcgtgcag
gaacgcacacagccctctagtgtccagaaccccacagcgatccactcggccagggatgac
tacctgaaggtgtactggcgccatgcggcaggggactttgactactaccaggtggtcatc
aagcacaacaacctcttccaccagaacaagacggttatgaagagccagaacgagtgtgtg
ttcaacggcctggtgcccgggagactctacactgtcatcgtcagcacctggagcgggaag
tatgagaccagcgtgtccacggacggaaggaccttccctgcggcggtgagatcactagct
ctggctgggcggggcacggaggaccttcgtgtcgcctggctggctgctctgggggatgtg
gatcactacgaggtgcagctcctcttcaacgacatgaaggtgttcccgcccatcaccctg
ggcagcagcgcaggggcgtgtgtcctgtcctccctcaccccgggacgcctctataagatc
cacgtttccaccttcagcggacccaaccagagggcccagttcatagagggcaggacagtt
cccagcaaggtcaagaacatccacgtgagcaacaatgggcagagcaacagcctgaagatc
agctggaccccggggcagggtgacgtggacagctactctgtgtcgttgtcactggacggg
ccagagggacgcatgctggagacgcgacccgtacccaaacacccaaatcagctgggattc
aactccctgcagcctgggcagctgtacagtgtgactgtaaggtctatcagtggtatactg
ttgaacaacaacacggccagcggacgcaccgtcccctctgcagtgacgggcctgcaggct
gacaacagacacaccacctgcagtattcaggtgagctggcaggaggcccggggagtggcg
gacggctacagcctgcagctgctggacgacaggggacatctggtcaccaacagctcccag
gcctcctctgggtccactccgctccagcaccacttcgacggcctcaccccggggaagagg
taccacgtcctggtccacaccaccagcggaggggtccacagtgagggggtcaccgctgaa
gcacgcacgcgtccggcggcggttagcaacctctccatccaggccaacagcagcagcagc
ctgtccttccactggtctcccccagagggagagttggaaggttacgacctctacctgtac
aatggagacgacaccctgtacgaccggcgcagcggccagcctaagaccctgcaggtctcc
ttccagggcctgaggcctggtgccccctacaggatggtggtgttaacacgcagcggagag
cagaccaatgactcagctatctgggccaggactgtcccagctgcagtgacgtctctgcag
gcccgaagtcatccccaggcggaggagctctgggtgtcgtgggagcgtgcagagggggag
ctgagcggctacctgctgtctctctacaacccagatggctcccagcaggcagaggaggct
ctagggcccgacgccacggagtatgccgtccccacgctgatccccgggcgcctctacctt
gctgtcatcctcacccgcagtggagagctcacaaacagggccaccactcagggcaggacc
gcccccagacccccaacctctgtgtcattcggcggggtcaccaacacatccctggaactg
acctggagtggtcctgcaggcagcgactatgacgactttgacctgcagtgggaaccgcgg
gaccacctgtctgtgttcaacccctaccacacccggacctccggcagccgcatccttaag
ggcctgtaccccggacgcttgtacaacttcagcctgcgtactgtcagtggggctgttggt
ggtgttggtgaggatgggagccctgcttacagcctgcccatccacaagagcatccgaacc
aagccagagcgtgttcagtacctacactgccgcccccagaactccacctccatctcctgc
tcctggggccccccggaggccgactgtgactcctacaccattgagtgcctccaccaggac
tcccgcaccctggtgtactcccggcgtacgggccgcgacagcaccctctaccacatcacc
cagctggagccgcataaacgctacaccgtctccatcaaggctatctccgacagcatgacc
agcgaggccgctgaggatagcgtggtcaccatgatcgaccgccctcccctcccttccctc
agcacccgggttaacaacagcgctgctctcatcaccaaaaacaccatcttcttcaagttt
aactgcagctggttcagtgacatcaacggagcagtcaagttcttcacagtggtggtgacc
gagtctgaaaacaatgaaaacattcaaccagagcagcaccaccctctaccctcctatctg
gactacaaattgaacagttccgtcaaggcctaccaaaccagctacttccccagccgctgc
acagagggatcagacagcgagacccagagctttgcgatcagcctgggtacgggtatggac
acccttgggggggcatgtgaccacctacaggcccaggacagggagcaggacccagacaaa
cacagagaccaccctttctgtgatggcccactcaaacccaaaactgcatacaggctcagt
gtgcgggcgttcacccagctttttgacgaggagcagagcagatacaccccgcccctctac
acagacacttacctgtccctccccctggtcacagaagcagagcccctgagcggtgtgatc
gagggcatcagtgccggcatgttcctcattgtcatgatggtgggagtcactgcactgctc
atctgcagacagaaagttcgcaaagttgtgcaggagcggcgggtggtccgactgagcatg
aggagggagaggcccacatcaggagtgcacatgggcgtcaggggtaaccgtcgtatttca
agccccgtcaagatcatgcactttgagtcccactacaccaaactccaggctgactccaat
tatctactgtctgaggagtacgaagacctgaaagacgtaggaaggaaccagcccctggac
acagccctactgccagagaacagggggaagaaccgatacaacaacatccttccttacgac
ttgacccgtgtgaagctgtcctatgtggatgatgatccgtgctctgactacatcaacgcc
agctacattcctgggaacaacttccgtagggagtacatcgccactcaaggcccacttcct
ggaaccaaggatgacttctggaagatggtgtgggagcagaatgtcaataacattgtcatg
gtgacgcagtgtgtggagaaaggcagggtgaagtgtgatcactactggccctttgaccag
gaacctttgtattatggagacctcatagtccagatgctgtctgagtctgtgctgccagag
tggactatccgggaattcaagatttgcagcgaggaccagttgaactactccagggtggtg
cgtcagttccactacacggtgtggcccgaccacggcgtcccagagaccacccagtcactc
atccagtttgtcaggaccgtcagggactatgtcaacaggacccctgggtctggggccacc
gtagctcactgcagtgctggtgtgggccgtacagggactttcatatccctggacagagtc
ctgcagcagctggacacaaaggacacagtagacatctacggagctgtcttcgacctgcgt
ctccaccgctcacacatggtgcagactgagtgccagtatgcgtatctccaccagtgtatg
agagacgtcctccgagccaggaagcttcgcagtgagcaggagaaccccctctaccccatc
tatgagaatgtcaaccctgacccccaaagagatatggtgtatgccagacgttaa
DBGET
integrated database retrieval system
