Oncorhynchus kisutch (coho salmon): 109888920
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Entry
109888920 CDS
T09179
Name
(RefSeq) caldesmon isoform X1
KO
K12327
caldesmon
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
109888920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109888920
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
109888920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
109888920
NCBI-ProteinID:
XP_020335660
Ensembl:
ENSOKIG00005045619
LinkDB
All DBs
Position
LG4:complement(51438217..51501012)
Genome browser
AA seq
715 aa
AA seq
DB search
MDDDFDQRMELRRQRREQMRLDAEKGFSTTDDDEEVARERRRNAREERMKKAEMEESSSS
TVTTDVNNTHSVTETESSSTGAELSSSAGDGDDVVLLDRLAKREERRQKRLKEALDRQKE
FDPTITDGNENSQEETLPSERHRGTEEEEKEEKPAQEEVTTNSWSREEEKEVKEEEATPK
EEEPEPVTEPEKAEEVEEEKKEEDVEETQIVQEKFIEFVVPAAPLQECGFEISIMPKMAV
EDKSVDEISKKEEEDKQKKELEEKEAAAKLKKEAEEKAEKERKEAEEKAAKLKKEEEVKA
AELKKEEEVKAAELKKEEEVKAAELKKEEEKAAKLKKEEEKNAQLKKEAEEKEKAVKLKK
EAEEEEKAAKLKKEGEEKAKKSKQAEEKKKAEEEKSKKREAAKVELEKPKLRSVRKDEKE
SSLSKQQNGSVVRSAETEDQERLEAERKLEELKRRRDEADSEEFEKMKQKQHESEAELEE
LKKKREGRKKVIEEEEKQKKAELAEKKAKEQEERKRLKEEIEQRRKDAAEKKKQMIEESG
DGDKKPFTLGVTPKGKIGERAEFLNQRAQKSCKTSHAPIVSKIGNRLDLYTAAVQTNRDV
RSPKSPVSDLPETPSIRNIKSMWEKGNVGGATESPKPMNKDAADIKVGVAGLTKGWGKSP
ADTGKAAAAAAEKADDLKPVDVGNKRSLWETKGSSPAKVTVGGKNKSVTNAGVGR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgactttgaccagcgcatggaattgaggaggcagaggcgtgagcaaatgcgt
ctagatgcagagaagggcttcagcacaactgatgatgatgaggaggtggctcgcgagcgt
aggagaaacgctcgtgaggaacgaatgaaaaaggcggagatggaggagtctagcagcagc
accgtgacaacagatgtcaacaacactcacagtgtgacagagacagagtcctcctccacc
ggtgcagagttgagctcctcagcaggtgatggggatgacgtggtactcctggaccgcctg
gccaagcgggaggaacgcagacagaagaggttgaaagaggcactggatagacagaaggag
ttcgacccaaccatcaccgatggtaatgagaacagccaggaggagaccctccctagcgag
cgccacagaggcacagaggaggaggagaaggaggagaaaccagcccaggaggaagtaacc
accaactcctggagtagagaggaggagaaggaggtgaaagaagaggaggcgacgccaaag
gaagaagagcctgaacccgtcacagagccggagaaagctgaggaggtggaggaagagaag
aaagaggaagacgttgaagaaacacaaatagtacaagagaaatttattgaatttgttgta
cccgctgcaccactacaagagtgcgggtttgaaatatcaattatgcccaagatggcagta
gaggataaatctgttgatgagatatctaagaaagaagaggaagacaaacagaaaaaagag
ttggaagaaaaagaggctgcagcaaaactcaagaaagaggctgaggaaaaggccgaaaaa
gaaaggaaagaagctgaagagaaagctgcaaaacttaaaaaagaagaggaagtgaaagct
gcagaacttaaaaaagaagaggaagtgaaagctgcagaacttaaaaaagaagaggaagtg
aaagctgcagaacttaaaaaagaagaagaaaaagctgcaaaattgaagaaagaagaagaa
aaaaatgcacaactcaagaaagaagctgaagaaaaagaaaaggctgtaaaactgaagaaa
gaggctgaagaagaagaaaaagctgcaaaactcaagaaagaaggagaagagaaagctaaa
aaatctaagcaagcagaggaaaaaaagaaagctgaggaggaaaagtccaaaaagcgggag
gctgcgaaggtggagttggagaaaccgaagttaagatcagtgaggaaagacgaaaaggag
tcctccctctccaagcagcagaacggcagtgtggtgcgctccgccgagaccgaggaccag
gagcgcctggaggcggagcgtaagctggaggagctgaagcggcgtcgtgacgaggcggac
agcgaggagtttgagaagatgaagcagaaacagcacgagtctgaggccgagctggaggag
ctgaagaagaagagggaggggaggaagaaggtcattgaggaggaagagaagcagaagaag
gcagagctggctgaaaagaaggcaaaggagcaggaggagaggaagaggttgaaggaagag
atagagcaaagaagaaaagacgctgcagagaagaagaaacagatgatcgaggaatcgggc
gacggagacaagaaacccttcacattgggtgtcacgcccaagggcaagattggggagaga
gcagaattcctgaaccagagagcccagaaaagctgtaagacatcacatgctcctattgtc
tccaagataggcaacagactggacctatacactgctgcagttcagaccaaccgggatgtg
aggtctcctaagtctccggtctcagacctgccagagacaccaagcatccgcaacatcaag
agcatgtgggagaaagggaacgttgggggggccactgaaagtcccaagcctatgaataag
gatgctgctgatattaaagtgggtgtggctggactgaccaaaggctggggcaagagccca
gcagacactggcaaggcagctgcagctgccgctgagaaggctgatgacctgaaacctgtt
gatgtgggcaacaagcgcagcctatgggaaacaaagggctcctcccctgctaaggtgaca
gttggaggcaagaacaaatctgtcacaaatgcaggtgtgggacgctaa
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