Oncorhynchus kisutch (coho salmon): 109888926
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Entry
109888926 CDS
T09179
Name
(RefSeq) nuclear pore complex protein Nup133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109888926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109888926
03036 Chromosome and associated proteins [BR:
oki03036
]
109888926
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109888926
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109888926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
109888926
NCBI-ProteinID:
XP_020335667
Ensembl:
ENSOKIG00005000208
LinkDB
All DBs
Position
LG1:complement(66524295..66540852)
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AA seq
1140 aa
AA seq
DB search
MFSPRPTPCSGRWQSSRVTGRKSLAGTPTGLLFSPRRTSLAARSTPTRVQSYSTSEALHF
DVQTFGSSLPVKVMEALTMADADDQISVKVDESGWAWMVCGERLIIWKICQTAVAKLSVC
KGLQLPTSEFVYYADLISISSPSPLETATVQSISVMAVSPEGTARFWPSLAHEGNYAETV
VDMGENLCNFVVAVRGGSFIVSSYKGQLMRLWADPSGKPLQRALQQGQGVLSGIGRRVSS
LFGMLAPLTNNNLHSVLWVGETGCLYTLTSYGLSKWEVNEVTEHQVLSWDSSRALTESVA
DAIWGSESNYEEIKEGVNVTYMDMQLSQDGLVVLAAAWHPSDSPCLAYFCLVTLLDNGNN
ISEELSVEVTKYNPPFQSEDALQAMRLLLPLASSPAAFLYNEELVFACSTGTGSGGLPEE
KIPFNTPGDRLRGGGCCANLPVFFSQNSGLVAVVARESASMLPETMEDSLCFSLAGAGPE
ATAMETPTRMEPVAQEDKTKLLKAAFLQFCRNDLVGAQNMTDELFPPEGEGDWEVGGELD
LVVTRINLDLVDDYPASDPRWAESVPDESAGFPLTSLIILHQLEDKMKAHSCFMDFLLQV
GLLDRLGQTTVRSSPMATRLLLCEHAEKLQAAMTLKNHHAKHGELVNRAILIALRKSNAT
VSTSLTAADVFFREVSQISSVFECLLEEEDRTLKENPVDSVKWAEVVISVNTIIKDMLQA
AGQYRDTKASLYRASESTTAEPEYIPWTASSGLGGVRTVIARQHEVILRDVYPHADSEMR
NGLNEQLTALLDVLLGGYVAQLTSLRLGRPGQQDHYNTLEMEYTQGRSELLAPLLELGQY
QWVAALAEKYCDFDILVQMCEQTDNQNRLQHYMAKFADQNFADFLFRWYMEKGKRGKLLS
QPIAQHQQLASFLQSHEHLSWLHHIHVHDFSSAHKTLYGQANMETRYFVKKKTLLALSKL
TALASDMPEAVMKTHVDDMVEQERFLLHQETLPKQLLEEKQQNPDTMPLLSAHNLINLYI
CDDNRRANEYDFKKALDLLEYIDEEDAVDIEGLKCEIFCKALKKDEWSSADGNDDPLEAA
KDSIFVKILLKLIQEGVPLQTYLPDFKDLLQLDEMEALKSKPTFEFVMRANYEHYLQAQI
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtttagccctcgtcccaccccttgttcaggccgatggcagtcctcaagggtcaccggt
agaaagagtctcgccggtacacctacagggcttctcttttccccacgtaggacgtcgtta
gcagcgagatcaactcccacgcgtgtgcagagctactcaacttcagaagcactccacttc
gatgtccagacgtttggctcttctctacctgtcaaagtcatggaggctttgactatggct
gatgctgatgaccagatctctgtgaaggtggatgagagtggctgggcctggatggtgtgt
ggagagagactgatcatctggaagatctgccagactgctgttgcaaagttgtcagtatgt
aagggcctccagctgcccactagtgaatttgtctactatgctgacctcatctcgatttca
tctcccagccctctggagactgccactgttcagtctatctctgtcatggcggtgtctccg
gagggaacagcccggttctggcccagtttggcccacgaggggaattacgctgagactgtg
gtcgacatgggcgaaaacctctgcaactttgttgtggctgttagggggggtagtttcatc
gtgtcatcctacaagggccagttgatgcgtctctgggcggacccctccggaaagccgctg
cagagagcgctacagcagggccagggggtgctttccggcatcggacgccgcgtctccagc
ctctttggcatgctcgccccgcttaccaacaacaatctccacagtgttctgtgggtggga
gagacgggctgcctatatactctgacctcctatgggctcagtaaatgggaggtgaatgag
gtcacagagcaccaggtcctcagctgggactccagccgcgctctgacggagagtgtcgcc
gacgccatctgggggtcagagagcaactatgaggaaatcaaggagggagtgaatgttacc
tacatggacatgcagctgagccaggatggcctggtagttttggcagcagcctggcacccc
tcagactccccctgcctcgcctacttctgcctggtcaccctgctggacaacggcaacaac
atctctgaggagctctctgtggaggtcaccaagtacaacccccctttccagagtgaggat
gccctccaggccatgaggctgttgttaccactggcctccagccctgctgccttcctgtac
aacgaggagctggtgtttgcctgctccaccggtaccggcagcggaggtctacctgaggag
aagatccccttcaacacacctggtgaccgtctgcgtggtgggggctgctgtgccaacctg
ccggtgttcttctcccagaacagtggtctggtggccgtggtggccagggagagtgcctca
atgctgcctgagaccatggaggactccctctgcttctccttggctggggccggccctgag
gcaactgctatggagactccgactaggatggagcctgtagcgcaagaggacaaaaccaaa
ctcctaaaagcagcgttcctgcagttctgccggaatgacctggtgggggcccagaacatg
acagatgagctgttccccccggagggggaaggagactgggaggtgggcggggagctggac
ctggtggtgacccggatcaacctggacctggtggacgactacccagcctcagacccccgc
tgggccgagtctgtccctgacgagagtgctggcttccccctgacctccctcatcatcctc
caccagctagaggacaagatgaaggcccacagctgcttcatggacttcctgctacaggtg
ggtctcctggaccggttgggccagaccacggtgcgctcgtctcccatggcgacgcgcctg
ttgctgtgtgaacacgccgagaagctacaggcggccatgacgctgaagaaccaccacgcc
aagcacggcgagctggtcaatcgcgccatcctcattgccttgaggaagagcaatgcaacc
gtgtccaccagcctcacggccgcagacgtcttcttcagagaggtgtctcagatctcctca
gtctttgagtgtctactggaagaggaggacaggactctaaaggagaaccctgtggactct
gtgaagtgggctgaagtggtgatcagtgtcaataccatcatcaaggacatgctgcaggct
gctggtcagtacagagacaccaaggcctcactgtacagagcctcagagagcaccactgct
gagccagaatacatcccatggaccgcctctagcggtctgggcggggtgcgcaccgtcatc
gcccgccagcatgaggtgatcctgcgtgacgtgtaccctcacgccgactcggagatgcgc
aatggcctgaacgagcagctgacagcactgctggatgtgctcctgggaggctacgttgcc
cagctgacctcactgagactgggccgtccgggccagcaggaccactacaacaccctggag
atggagtacacgcagggtcgctctgagctgctcgcaccactgttggagctgggtcagtac
cagtgggtggcggcactggcagagaaatattgtgactttgacattctggtccagatgtgt
gagcagactgacaaccagaatagactgcagcactacatggccaagttcgccgaccagaac
tttgcagacttcctgttccgctggtacatggagaagggaaagcggggcaagctgctctcc
cagcccatcgcccagcaccagcagctggccagcttcctgcagtcccacgaacacctcagc
tggctgcaccacatccacgtacatgacttcagcagtgcccacaaaaccctgtatggccag
gccaacatggagacacgttactttgtgaagaaaaagaccctgttggctctcagtaaactg
actgccctggcatcagacatgcctgaggctgtgatgaagacacatgtagacgacatggta
gagcaggagcggttcctgctgcaccaggagactctgcccaaacagctgctggaggagaaa
caacagaaccctgacaccatgcccctgctcagcgctcacaaccttattaatctgtatatt
tgtgatgacaaccgacgagccaatgagtatgacttcaagaaggctctggatctactggag
tacatagacgaggaggatgctgtggacattgagggactcaagtgtgagatcttctgcaag
gccctcaagaaagatgaatggtcgtctgctgatgggaacgatgaccctctggaggcagcc
aaggacagcatctttgtcaagatcctcctcaagctcatacaagaaggtgttcctctacag
acctaccttcctgacttcaaagaccttcttcaactggacgagatggaggctttgaaatca
aagcccacttttgagtttgtaatgcgggccaactatgaacattacctgcaagcacagatc
tga
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