Oncorhynchus kisutch (coho salmon): 109888983
Help
Entry
109888983 CDS
T09179
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109888983
Membrane trafficking [BR:
oki04131
]
Protein recycling
Others
Others
109888983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
109888983
NCBI-ProteinID:
XP_020335717
Ensembl:
ENSOKIG00005048662
LinkDB
All DBs
Position
LG4:complement(72133272..72184327)
Genome browser
AA seq
1271 aa
AA seq
DB search
METTVGCCPHWLIAMWMCLFTLTSTLDMTKTNIRCIPSSQLSVIKPAPRELSKVGFDPFG
KGPEDEAVGVAEKSPGCHPFKSSCKKANVAEYLARVSGDGEARSSVPESEQPFVNKSYSR
GLEERRLVDSSEVLYQHKSGSGITSKLTDRPMPPPATLNKVTVNNTRHNTINRFGRENRL
KRHELSIKKAGASLRNLHRRRKRSFQTAESKTSWSGFGWNGEDASNPGQHELKLSSSTFA
LTGDSAHNQAMVHWSGQNSSVILMLTKYFDFSLGSVTESSLWRSTDYGTRYEKLDEKVGP
KTILSYLYVSPNNKRKIMLLTDPEVESSLLISFDEGASYQRYHLAFDILSLLFHPEQEDW
ILAYSHDQKLYVSVEFGRRWQLVHDSVVPNRFYWSKLGLDKEPGMIHLETSVSDRRSQYI
TCKLQNCTEANKGRPFPGFISPDSLVVQDQYVFIQVPMGGRPVHYVSYKRNAFFPMKLPK
YTFPKDLQIISTDDNQVVAAVQDWHQNDSYNLYMSEAHGLFFTLALENVVSSGGPEGNVM
IDLYEVAGIKGVFLSNKVVENEVKTFITYNKGRDWRLLHAPTTDLSGTRLYCVQPYCSLH
LHLHVSDNPYTSGNIVSKESAPGIIVASGTIGPELTANNVSIFITSDAGNTWREVFEEEY
SILFLNQGGALVAIRHTPLPIRHIWLSFDEGRHWNKFSFTSSPLYVDGVLGEPGEDTLIM
TIFGHFSHRSEWQLVKIDFRPIFNRRCTTDDYQTWQLHNDGKVCIMGVKRIFQNLKPDAR
CVKTKDQYISQMSDSCPCTEADFECDFGFERQSDGGCTAAFWFVPSSVSRDCTTGDSFLN
TTGYRKALSNNCTAGTLGKYRLRRQRCPHQAPRGLQLVTSEGTLTATLGDNVTLLVFLEE
GDGSTTSITVDFGDGTAISYANISSIEDGVKHTYSKVGIYQVAAMALNSLGSERVLLYLH
VTCTLEQVQLSAPSVVVRNKAVDLSTVLKPRYVGTVTYYWWFNNHTEPVVTLVGGMSFTF
YKEGTHTVTVQVSAGNTVLQDKITVAVYEYFRSHVLAFSSNLDAFNPAVAEWRQDISRVV
KDSMVQVTGINGEQLLVSVLPGLPTAAELFIIPEKRPTEGTMNRKGTHLEQLSQVLLSAL
NQDLIQFTLRPGVQVNVYPTRLSPAPLVDTSESGHNGAAVIMLVSVVFVGLAVFVIFKFK
RKIPGINIYTEERSEKQQEVIPTVASIAVPNPEGDMVTSLEHLDTGPDARGIGYLPSLTD
IKLSDETPHVF
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaactgtcggttgctgccctcattggctcattgctatgtggatgtgtcttttt
accttaacttccaccctggacatgacaaaaacaaatataaggtgcattccatcaagccaa
ctctctgttatcaagccggctccccgggaactctcgaaagtgggatttgatccatttgga
aagggaccagaggatgaagctgtgggggttgcagagaagtcaccaggttgtcaccccttt
aagagcagctgtaaaaaagccaatgttgcggaatatttagcgcgcgtctccggtgatggc
gaggcaagaagttcagtccctgaatccgagcaaccgtttgtaaataaatcatacagccgt
ggattagaagaacgtcggctcgtggacagttctgaagtgctctatcaacataaaagtggc
tcgggcatcacctccaaactcacagataggcctatgccgccacctgccaccctcaataaa
gtaaccgtcaataacactagacataatacaattaatcgttttggaagagaaaatagactt
aaacgacatgagttatcaataaagaaggccggggcaagtttgaggaaccttcaccgtcga
cgaaagcgcagcttccaaaccgcggagagcaaaacatcttggtccggattcggatggaac
ggtgaagatgcgtcaaaccccgggcaacatgagttgaaacttagtagttctacattcgca
ctcacgggggattcagctcataaccaagccatggtgcattggtccggccaaaatagcagc
gtgattctaatgctgactaagtactttgacttcagccttggcagtgtcacagagagctct
ctatggaggtcaacagactatggaaccaggtatgagaaacttgatgaaaaggttgggcca
aaaaccatactaagctacttgtacgtgagtccgaataacaaacgaaagatcatgttactg
accgacccggaggtggagagcagcctgctcattagctttgacgagggcgcatcctatcag
aggtaccacttagccttcgacatcctcagcctcctcttccaccccgagcaggaggactgg
atcctggcttacagccacgaccagaagctctacgtctctgttgaatttggaagaagatgg
cagctcgtacatgacagtgtggtccccaacagattttactggtcaaaactgggtttggac
aaagaaccaggaatgattcacttggagacaagtgtttctgacagacgatcccagtatata
acatgtaagctgcagaactgcacagaggccaacaaaggcaggcctttccctgggtttatc
agcccggattccctggtggttcaggaccagtatgtattcattcaggtaccaatgggtggc
cggcctgtccattatgtgtcatacaaaagaaatgctttcttccccatgaagctgcctaag
tacacatttccaaaggacttgcagataatcagcacagatgataaccaggtggtggcagca
gtgcaggattggcaccagaatgactcctacaacttgtacatgtcagaggcccatggtctc
ttcttcactctggccctggagaacgtagtgagcagtgggggaccagagggcaacgttatg
atagacctctatgaggtagcagggataaaaggggtgttcttgtcaaataaagttgtcgag
aacgaagtgaaaacatttatcacttacaataaggggcgagactggcgtcttctacatgct
cctacaactgatctgagcggtaccagactctactgtgtacagccctattgttcattgcac
ctgcatctccatgtgtctgacaacccgtacacgtctggaaacatagtcagcaaagaatca
gctccaggaattatagtagcatcaggtaccattgggcctgagctgaccgccaataatgtc
agcattttcatcacctcagatgctggcaacacttggagagaggtatttgaggaggagtat
agcatcctctttcttaaccagggcggtgccctagtggccattcgacacacacctctcccc
atcagacacatttggttgagttttgatgagggaagacactggaacaaattcagctttacc
tcctctcctctctatgtagacggagtcttaggagagccaggggaggacaccctcatcatg
acgatatttggccatttcagccatcgttctgaatggcagcttgtcaagattgacttcagg
cccatcttcaacagaaggtgcaccacagacgactatcagacctggcagttacacaatgat
ggtaaagtctgcatcatgggagtgaagagaatcttccagaatctgaagcccgacgccaga
tgtgtcaaaaccaaagatcagtacatctcccagatgtcagattcctgtccatgcactgag
gctgactttgagtgtgattttggctttgagaggcagagtgatggaggatgcactgctgcc
ttctggtttgttccatcctccgtgtccagagactgcaccaccggagacagcttcctaaac
actacaggataccgtaaggctctgtccaataactgcactgcgggaacccttgggaagtac
cgtcttaggaggcagaggtgtccccaccaggcccccagaggtctgcagctggtcaccagt
gagggaacactcacagccaccctgggggacaacgtgaccctcctggtgtttctggaggag
ggtgatggctccacaacaagtataacagtggactttggagacgggacggccatatcctac
gctaacatcagctccatagaggatggggtcaaacatacctacagtaaagtcggcatttac
caagtggctgccatggcactcaacagcctgggctctgagagagtcttactatacctgcat
gttacttgtacacttgagcaagtgcagctttcagctccctctgtggttgttaggaataaa
gcagtggatctatcaacagtcctgaagccacgttatgttggaacagtcacctactattgg
tggttcaacaaccacactgagcctgtcgtgactttagtgggaggaatgtccttcaccttc
tacaaggagggaactcatactgtcaccgtgcaagtgtcagcaggcaacactgtccttcaa
gacaaaataactgttgcagtctatgaatatttccggtcacacgttttagcattctcgtct
aatctggacgccttcaatcctgctgtggctgaatggagacaggacatcagtagagtggtc
aaggactccatggtccaagtcacagggatcaatggagagcagcttctggtgtcagtgctt
ccagggttgccaacggcagcagagttgtttatcatcccagagaaaaggccaacagagggg
acgatgaatagaaaagggacacatttagagcagctttctcaggtcctgctaagtgccctg
aaccaagacctcatccagtttactctgcggcccggggttcaggttaacgtttaccccaca
cgactgtctccagctcctctcgtggacaccagtgagagtgggcacaatggtgctgcagtc
attatgctcgtgtctgtagtatttgtgggtttggcagttttcgttatcttcaagttcaaa
aggaagatccctggcatcaacatatacacagaggagaggtcagagaaacaacaggaagtg
atccctacggtggcgtccatagctgtcccaaatcctgagggagacatggtgacctctttg
gagcacttggacacagggccagatgcacgtggcataggatacctgccatctctcacagac
atcaaactctccgatgaaactccccatgtgttttaa
DBGET
integrated database retrieval system
