Oncorhynchus kisutch (coho salmon): 109888987
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Entry
109888987 CDS
T09179
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109888987
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109888987
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109888987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
DUF7024
Motif
Other DBs
NCBI-GeneID:
109888987
NCBI-ProteinID:
XP_031679443
Ensembl:
ENSOKIG00005028676
LinkDB
All DBs
Position
LG4:73099311..73109791
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AA seq
733 aa
AA seq
DB search
MAQGITTGEYWEDRVAFETEGAGQEHVEYDDVLEFNTFDGLPYSSRYYTLLKERMALPVW
KAKCDFMDKLANKQFVIVSGTAKTGRSCQIPQWCAEFCLSVQYQNGMVVCTQDHRQHTVD
LALRVADEMDVNIGHEVGYSIPLETCCSSDTVLRYCTSDMLLREMMSDPMLEHYGVIVID
QAHERTVSTDVLLGLLTDIALQRPELRVVLLTATHPGPKLLGHYRNVPLIQLEGVCSAEA
VYTGTSHKDYFCSALRLVLEIHHSQEEGDIVVFLATTQEIDLARDILHREEVNTSPHLGE
LLPISVHPGLGGTLPMPSEEDGRCRRVFLTSSPNEDLFWAVHKLNFVIDAGVQKRNVYNP
RIRANSVAIQPISRSQAESRKQLVGTTGKSFCLYPEDTPLPSETRPHILESDITSTVLFL
KRMDIGGLGRCDFIDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEFPLEPQMAKT
LLASCEFDCVSEVTTIAAMLAAPSCYLVPSMELRLEASQCHLKFQHPEGDHFTLINIYKA
FKQNQQEPFVSVEKWCQDYFLSLSALQTADAIRSELTDILRRIELPVSMPSFGSKGNIIN
IKRALLAGFFMQVARDVDSSGNYFMLTHKHVAQIHPLSAYGTKTPKLGLPEWVLFHEYTF
SEDNCIRTVSHISPEEFIQMAPQYFFFNLPPSESKDILQNILDKGAEHYKAKKIKKSPSL
DSIPEVTASCVIQ
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagggcataacaaccggagagtattgggaggatagagtagccttcgaaacagaa
ggagcaggtcaagaacatgtggaatatgatgatgttttggagtttaatacatttgacgga
ctaccctactcgtctcgatattacacattactgaaggaaaggatggctctaccagtttgg
aaagccaagtgtgatttcatggacaaactggccaacaagcagtttgttattgtctctggc
acggcaaaaactggcagaagctgtcagatcccccagtggtgtgcagagttctgcctgtct
gtccagtaccagaatggcatggtggtgtgcacccaggaccacaggcaacacacagtggat
ctggccctgcgtgtagctgatgagatggacgtcaacatcggccatgaagtgggctacagc
atccctctagagacatgctgctctagtgacactgttctcaggtactgcactagcgacatg
ctgctcagagagatgatgtcagaccccatgctggagcactacggtgtcatcgtcattgac
caggcccatgagaggacggtcagtacagacgttctgctgggcctgctcacagacatcgcc
ctgcagaggcccgagctccgtgtggtgctcctcacagctacacacccaggacccaaacta
ctgggccactacaggaatgtcccactgatccagctggagggcgtgtgttcagcggaggct
gtgtatactggtaccagccacaaggactacttctgctctgccctgcgactggttctggag
atacaccactcccaagaggaaggggacatagttgtgtttttggccacaactcaagagata
gatcttgcccgcgatatcctccatcgcgaggaggtcaatacatctccacatctaggggaa
cttcttcctatctcggtgcaccctgggctgggtgggactctgcccatgccaagtgaagag
gacggccggtgcagaagagtcttcctcacctccagtccaaacgaagacctcttttgggct
gtgcacaagctgaactttgtcatcgatgccggtgtccagaaaagaaatgtttataaccct
aggatcagggcgaactcagtcgccattcaacctatcagtaggagtcaagcagagagccgc
aaacagcttgtaggaacaacagggaagagtttctgtctgtacccagaggacacacccctg
cccagcgagacacgcccccacatcctggagtctgacatcacgtccaccgtgctcttcctg
aagaggatggacatcggtggcctgggccgctgtgacttcatcgacaggccagatcctgaa
ggtctgatgcaggctttagaggaactggactacctagcagcccttgatgacgatgggaac
ctgtcagagatcggcatcatcatgtctgaatttcccctggagccccagatggccaagaca
ctacttgcctcctgcgagtttgactgtgtcagcgaggtgaccaccatcgccgccatgctg
gcagcaccaagctgctacctggtcccctcaatggagttgaggctagaggcctctcagtgt
caccttaagttccagcacccagaaggagatcacttcaccctaatcaacatctacaaggct
ttcaaacagaaccagcaggagccctttgtcagtgtggagaagtggtgtcaggactacttc
ctgagtctgtctgccctgcagacggctgatgctatccgctctgagctgactgacatcctg
aggaggatagagctgcctgtctccatgccttcctttggttccaagggaaacataatcaac
atcaagagagcgctattagctggcttcttcatgcaggtggcgagggatgtggactcatca
gggaattatttcatgttgacgcacaaacacgtggcccagattcaccctctctctgcctac
ggcaccaagacgcccaaactgggcctgccggagtgggtcctcttccatgagtacaccttc
tcagaggacaactgcattcgcaccgtgtcccacatatcaccagaggagttcattcagatg
gctccacagtacttcttctttaacctgcctcccagtgaaagcaaggacatcctccagaac
atcttagacaagggagctgaacactacaaagcaaagaagattaaaaagagccccagccta
gacagcataccagaagtcacagctagttgtgtcatacagtga
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