Oncorhynchus kisutch (coho salmon): 109888997
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Entry
109888997 CDS
T09179
Name
(RefSeq) testican-2 isoform X1
KO
K08136
testican
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oki00535
]
109888997
Proteoglycans [BR:
oki00535
]
Extracellular matrix (ECM) proteoglycans
Others
109888997
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Ortholog
Paralog
GFIT
Motif
Pfam:
SPARC_Ca_bdg
Thyroglobulin_1
Kazal_2
EF-hand_7
Kazal_1
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
109888997
NCBI-ProteinID:
XP_031679609
Ensembl:
ENSOKIG00005025428
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All DBs
Position
LG4:complement(79810314..79874712)
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AA seq
424 aa
AA seq
DB search
MVGMTDLGFLFVPVMMLVGFTLQAEINNGKEEEKKGNFMEDEHWLSTISQYSRKIKHWNR
FRDEVEDDYVRTWDENQGGSNENVDTTKDPCQKVKCSRNKVCIAQGYQRAVCVNRKKLEH
RLKQPALRSPEGGCQPCPFSSSGPVCGSDGHNYASQCKLEQQACLTGKELTTKCSGLCPC
PTATPTKETEVKHESCTGQDLSDLGDRLREWFQLLQGNAKLNNNSRTGASNTAEATSGSV
LDRSVVVSCKDSVGWMFSKLDTNSDQYLDQAELAAINLDKYEVCIRPFFNSCDSYRDGKV
STAEWCLCFWRQKPPCLAELERIQVQEGGKNKLGLFIPSCNEDGYYRKLQCDQARRECWC
VDQQGGELASSRIHGNPDCDEAVAYSGDFGSGVGWEDEEDKEAEENAEEEEGEVGEADDE
GYIW
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaatgacggatttggggttccttttcgtcccggtgatgatgctggtggggttc
accttgcaagcggaaattaacaacgggaaagaggaggagaaaaaggggaatttcatggaa
gacgagcattggctgtccaccatttcacagtacagccgcaagatcaagcattggaatcgc
ttcagagacgaagtagaggatgactatgtgaggacctgggatgagaatcagggaggctct
aatgaaaatgttgacaccaccaaagacccctgtcagaaggtgaagtgtagccgaaacaag
gtgtgtatcgcccagggataccagagggctgtgtgtgtcaaccgcaagaagctcgagcac
agactgaagcagcctgccctgaggtctcctgaaggaggatgccagccctgtcctttctcc
tcctctggtcctgtgtgtggctctgacggacacaactacgcctcccagtgtaaattggag
cagcaggcgtgcctcacagggaaggagttgactacgaagtgttctggtctttgtccctgt
ccaaccgcgaccccaaccaaagagacagaggtcaagcatgagagttgtacagggcaggac
ctgtctgatctgggggacaggctgagggaatggttccagctgctgcagggcaacgccaag
ctgaacaacaacagcaggactggagccagtaacacagcagaggctacctctggatcagtc
ctggacaggagcgtagtggtcagctgtaaggactctgtaggctggatgttctctaagctg
gacaccaacagtgatcagtatctggaccaggccgagctggcagccattaacctggacaag
tatgaggtctgcatccgacccttcttcaactcctgtgactcctacagggacgggaaggtt
tctacagccgagtggtgcctctgcttctggagacagaagcccccctgcctggctgagctg
gagaggatccaagttcaggagggaggcaagaacaaactaggcttgtttatccctagctgt
aatgaggatggatactacaggaagcttcagtgtgatcaggccaggagagaatgctggtgt
gtcgaccaacagggaggggaactagccagctccagaatccatggcaaccccgactgtgat
gaggcggtggcatattcaggtgattttggcagtggagtcggatgggaggatgaggaagat
aaagaagcggaggagaatgcagaggaggaggaaggagaggtgggagaggcagatgatgaa
ggatatatttggtga
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