Oncorhynchus kisutch (coho salmon): 109889025
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Entry
109889025 CDS
T09179
Symbol
psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
109889025 (psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
oki03051
]
109889025 (psmd1)
Proteasome [BR:
oki03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
109889025 (psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
Zip
Cnd1
Nop52
TASL
PA26
Tim54
NatA_aux_su
SMYLE_N
Motif
Other DBs
NCBI-GeneID:
109889025
NCBI-ProteinID:
XP_031678235
Ensembl:
ENSOKIG00005033095
LinkDB
All DBs
Position
LG4:9024556..9083939
Genome browser
AA seq
971 aa
AA seq
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MITSAAGIISLLDEEEPQLKEFALHKLNSIVNDFWAEISGSVDKIEVLYEDETFRSRAFA
ALVASKVFYHLGAFDESLNYALGAGDLFNVTDDTEYVETIIAKCIDHYTKQRVENAELPE
DEEKKSIDPRLEGIVNKMFLRCLGDHKYKQAIGIALETRRLDIFEKTILESNDVSGLLAY
SLKVCMSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKE
DNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIPAVPGSTNTGTVPIPDKDSDAMET
DDKASSSPAGKAADSKDEPKDQNAKMIKILSGEMAIEFHLQFLIRNNNTDLMILKNTKDA
VRNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVIHKGHEKEA
LQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQLKNASNDIVRHGGGL
GLGLAALGTARQDVYDLLKSNLYQDDAVTGEAAGLALGLVMLGSKSAQAIEDMVGYAQET
QHEKILRGLAVGIAMVMYGRMEEADTLIESLCRDKDPILRRSGMYTVGMAYCGSGNNKAI
RRLLHVAVSDVNDDVRRAAVESIGFIMFRTPEQCPSVVSLLSESYNPHVRCGAAMALGIC
CAGTGNKEAINLLEPMTNDPVNYVRQGALISSALIMIQQTEVTCPKVNQFRQLYSKVIND
KHDDVMAKFGAILAQGILDAGGRNVTISLQSRTGHTHMPSVVGLLVFTQFWFWFPLSHFL
SLAFTPTAIIGLNKDLKMPKVQYRSNCKPSTFAYPPALEVPKEKEKEKVSTAVLSITAKA
KKKEKEKEKKEKEEEKMEVEVQEAEKEKKDEEKEKEKEKEKEKEKKKEPEPNFQLMENPA
RVMPAQLKVLNMPETCRYQPFKPLHTGGIIIMKDTSEEEEELVEPVSAHGPKIEEEEQEP
EAPESFEYVDE
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgataacgtctgccgctggaatcatctcactgctggatgaggaggagccccaactcaag
gagtttgctctgcacaagctgaactccattgtcaatgacttctgggctgagatatcggga
tctgttgacaaaatcgaggtcctgtatgaagatgagacatttcggagcagggcgtttgct
gccttggtggcttccaaagtgttctaccacctcggggcatttgatgagtctttgaactac
gctctgggtgcaggagaccttttcaatgtcacagacgacactgaatatgtggagaccatt
atcgccaaatgcattgatcactacaccaagcagcgggtggagaacgccgagcttcctgag
gacgaggagaagaagagcatcgacccccggctggagggcatcgtcaacaagatgttcctg
cgttgcctgggcgaccataagtacaagcaggccatcggcattgccttggagactcgacgc
ctggacatcttcgagaagactatccttgaatcgaatgacgttagtggcctactggcctac
agcctgaaggtctgcatgtcactaatgcagaacaagaagttccgcaacgaggtcctccga
gtgctggtcaagctctacatgaatctggagaagcctgacttcatcaatgtttgccagtgc
ctgatcttcctggatgacccacaggcggtgagcgacatcctggagaagctggtgaaggaa
gacaacctgctgatggcctaccaaatctgcttcgacctgtacgagagtgccagccagcag
ttcctctcctccgtcatccagaacctgcgcaccgtgggcacgcccatccccgccgtgcct
ggctccaccaacacaggcactgtgcccatcccagacaaagacagtgatgctatggagacg
gacgacaaggccagcagctcccctgcaggaaaagctgcagacagtaaggacgagcctaag
gaccagaacgcgaagatgatcaaaattctcagtggagaaatggccatcgaatttcatctg
cagttcctcatccggaacaacaacacagacttaatgattctcaagaacacaaaggatgca
gtccgaaattcggtgtgtcacacagccacggtcatagccaactccttcatgcatacgggg
accacaagtgaccagttcctcagagagaacttggagtggcttgcaagagccaccaactgg
gccaagttcacagccacagccagtcttggcgtcattcacaagggtcacgagaaagaggca
ctgcagttgatggccacttatctgcccaaagacacctcacccggatcagcctaccaggag
ggaggcggcctgtatgccctcgggctaatccacgccaaccacgggggggacatcatcgac
tacctgctcagtcagctcaagaacgccagcaatgacattgtccgtcacgggggaggtctg
ggcctgggattggctgctttgggtacagccaggcaggatgtgtacgatctgctcaagtct
aacctgtaccaggacgatgcagtcacaggcgaggcagcaggactggccctggggctcgtc
atgctgggctccaagtctgcccaggccatcgaggacatggtgggctacgcccaggagact
cagcacgagaagatcctgcgcggcctggccgtgggcatcgccatggtgatgtacggacgc
atggaggaggcagacacgctcatcgagagcctctgcagggacaaggaccccatcctgcgc
cgctccggaatgtacacagtgggcatggcctactgtggctccgggaacaacaaggccatc
agacgcctgctgcatgtggctgtaagcgatgtgaacgatgatgtcagaagggcagcggtg
gagtccattggattcatcatgttcaggaccccagagcaatgccccagtgtggtgtctctc
ctgtcagagagctacaacccccatgtgcgctgcggagccgccatggccttgggcatctgc
tgtgccgggacaggcaacaaggaggccatcaacctgctggaacctatgaccaatgaccca
gtgaactacgtgagacagggtgccctcatctcctctgccctcatcatgatccagcagacc
gaggtcacctgtcccaaggtgaaccagttccggcagctctactccaaggtcatcaatgac
aagcatgatgacgtcatggccaagttcggggccatcctggcccagggcatcctggatgca
ggtggccgtaacgtcaccatctccctgcagtcgaggacgggccacacccacatgccatca
gtggtgggcctgctggtgttcacccagttctggttctggttccccctctcccacttcctc
tccctggccttcacccccaccgccatcatcggactcaacaaggacctcaagatgcccaag
gtgcagtaccgctccaactgcaagccttccaccttcgcctaccctccggccctggaggta
cccaaggagaaagagaaggagaaggtgtctactgctgttctctccatcacagccaaagct
aagaagaaggagaaagagaaggagaagaaggagaaagaggaggagaagatggaagtagag
gtacaggaggctgagaaggaaaagaaagatgaggagaaagagaaggagaaggagaaagag
aaggagaaagagaagaagaaagaacccgagcccaacttccagctgatggagaacccagcc
agagtgatgcccgcccagctcaaagtgctcaacatgcccgagacgtgccgctaccagccc
ttcaaaccgctgcacaccggcggcattatcatcatgaaggacaccagcgaggaagaggag
gagctggtggagcctgtctctgcccacggccccaagatcgaggaggaggaacaggagccc
gaggcccccgagtccttcgagtacgttgacgaatga
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