Oncorhynchus kisutch (coho salmon): 109889037
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Entry
109889037 CDS
T09179
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03272
Virion - Hepatitis viruses
oki04382
Cornified envelope formation
oki04514
Cell adhesion molecule (CAM) interaction
oki04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
109889037
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109889037
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109889037
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109889037
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oki03037
]
109889037
04147 Exosome [BR:
oki04147
]
109889037
Cilium and associated proteins [BR:
oki03037
]
Other cilia and associated proteins
Stereociliary proteins
109889037
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
109889037
Exosomal proteins of colorectal cancer cells
109889037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM37
Sugar_transport
TMEM_230_134
DUF5904
DUF202
DUF1218
Atthog
TMEM61
DUF6594
Motif
Other DBs
NCBI-GeneID:
109889037
NCBI-ProteinID:
XP_020335771
Ensembl:
ENSOKIG00005001483
UniProt:
A0A8C7C8U1
LinkDB
All DBs
Position
LG4:11447433..11452229
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AA seq
217 aa
AA seq
DB search
MTSSAVQLPGYALALIGLVGSVIATTMVEWKRHSYTESTVTSKETYLGLWMSCTVDATRH
TMCVNYKSLFHLPAEILTTRVVMILSVLLSAIGVLVATLGMRCTRCLEEDEKQKDRVAIV
GGFLFIIAGVLAISVTSWFANAIIQSFVFSDSPTSLHNRFEFGNAVLVSWGAGICSVVGG
FLLGCRYLWSCPQGSRSVSSFTQPKVIPGTRPGTHYV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgacgagctctgcggttcaacttcccggttatgctcttgctttgatcggtcttgttggc
tcagtgattgccaccactatggtggagtggaaaaggcactcttacacagagagcacggta
acatcaaaggaaacgtacctggggttatggatgtcatgcaccgtcgacgccacaagacac
acgatgtgcgtcaattacaagtcactctttcacctgccagcggagattctgaccacccga
gtggtgatgatcctcagtgtcctgttgtcagccattggggtgctggtagccacactgggg
atgagatgcactcgatgcctggaggaggatgaaaagcagaaggatagagtagccattgtt
ggaggattcctcttcatcattgcaggtgttctggccatatcggtaacctcctggtttgcc
aacgccatcatccagtcctttgtattctcagactcacctacttccttacataacaggttt
gagtttggcaacgctgtgctggtgagctggggtgcaggtatctgctctgtggtgggcgga
tttctcctgggctgcaggtatctgtggagttgtccccagggctcacgctcagtctcatcc
ttcacccaacccaaagtaattcctggcaccaggcctggcacccactatgtttaa
DBGET
integrated database retrieval system