KEGG   Oncorhynchus kisutch (coho salmon): 109889037
Entry
109889037         CDS       T09179                                 
Name
(RefSeq) claudin-1
  KO
K06087  claudin
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03272  Virion - Hepatitis viruses
oki04382  Cornified envelope formation
oki04514  Cell adhesion molecule (CAM) interaction
oki04530  Tight junction
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    109889037
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    109889037
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    109889037
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    109889037
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:oki03037]
    109889037
   04147 Exosome [BR:oki04147]
    109889037
Cilium and associated proteins [BR:oki03037]
 Other cilia and associated proteins
  Stereociliary proteins
   109889037
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   109889037
  Exosomal proteins of colorectal cancer cells
   109889037
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 TMEM37 Sugar_transport TMEM_230_134 DUF5904 DUF202 DUF1218 Atthog TMEM61 DUF6594
Other DBs
NCBI-GeneID: 109889037
NCBI-ProteinID: XP_020335771
Ensembl: ENSOKIG00005001483
UniProt: A0A8C7C8U1
LinkDB
Position
LG4:11447433..11452229
AA seq 217 aa
MTSSAVQLPGYALALIGLVGSVIATTMVEWKRHSYTESTVTSKETYLGLWMSCTVDATRH
TMCVNYKSLFHLPAEILTTRVVMILSVLLSAIGVLVATLGMRCTRCLEEDEKQKDRVAIV
GGFLFIIAGVLAISVTSWFANAIIQSFVFSDSPTSLHNRFEFGNAVLVSWGAGICSVVGG
FLLGCRYLWSCPQGSRSVSSFTQPKVIPGTRPGTHYV
NT seq 654 nt   +upstreamnt  +downstreamnt
atgacgagctctgcggttcaacttcccggttatgctcttgctttgatcggtcttgttggc
tcagtgattgccaccactatggtggagtggaaaaggcactcttacacagagagcacggta
acatcaaaggaaacgtacctggggttatggatgtcatgcaccgtcgacgccacaagacac
acgatgtgcgtcaattacaagtcactctttcacctgccagcggagattctgaccacccga
gtggtgatgatcctcagtgtcctgttgtcagccattggggtgctggtagccacactgggg
atgagatgcactcgatgcctggaggaggatgaaaagcagaaggatagagtagccattgtt
ggaggattcctcttcatcattgcaggtgttctggccatatcggtaacctcctggtttgcc
aacgccatcatccagtcctttgtattctcagactcacctacttccttacataacaggttt
gagtttggcaacgctgtgctggtgagctggggtgcaggtatctgctctgtggtgggcgga
tttctcctgggctgcaggtatctgtggagttgtccccagggctcacgctcagtctcatcc
ttcacccaacccaaagtaattcctggcaccaggcctggcacccactatgtttaa

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