Oncorhynchus kisutch (coho salmon): 109889077 Help Entry 109889077         CDS       T09179                                  Name (RefSeq) roquin-1 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism oki  Oncorhynchus kisutch (coho salmon) Brite KEGG Orthology (KO) [BR:oki00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:oki03000]     109889077    04121 Ubiquitin system [BR:oki04121]     109889077 Transcription factors [BR:oki03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     109889077 Ubiquitin system [BR:oki04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     109889077 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_UNK zf-CCCH_4 Prok-RING_4 zf_CCCH_4 zf-RING_6 FYVE Motif Other DBs NCBI-GeneID:  109889077 NCBI-ProteinID:  XP_031678341 Ensembl:  ENSOKIG00005026303 LinkDB All DBs Position LG4:14599740..14633122 Genome browser AA seq 1055 aa AA seqDB search MPVQAPQWTEFLLCPICTQLFEESLRKPISLGCGHTVCKMCLNKLHRKACPFDQTAIATD IELLPVNTALLQLVGGQVPKRQPTTLVTGAEDIAHYEKASECVEELAQYLKPLSNSRGVG LSTSSAQSSLSRPMQRKLVTLVHCQLVEEEGRVRATRAARSLGERTVTELILQHQNPQQL SSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASK TSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEDFWTYEALRREHDSQIVQIAMEGGLRIA PDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLEL LANIDPSPDSPPPTWELLDTGLVAVKTVVHGLVDFIQNHSKKGSDPQQPPQHSKYKTYMC RDMKQKGGCPRGTSCTFAHSQDELEKYRKMNKRLAARRPLSLSLTQLNEVGLLPEEVGML EGLAHKGLTNGMVASVTGSALPQLISRGADPSYETMMRKSQGSLSAPSSPPDLLDPVPNR AMAHPRMAVDHLAMHKQMPRRPSMYPPQQGELFYPPEPRAPPSALQYEASQNAPGNPPYP YQPSQYPPQPRYIRNPPPTNDPALPPYPGTYPQERQCPPPPQLSSSHFSNANPQGFAPPP HYDGRRHPAYPPPPPQSYSHREDPSMPADEASRERYLPEGYHPSGPHPSHVRPYTPRESY SRPQPTPSLDYLHRRRQEIMAQLEDGKQVTPPPFAPSPTLPHHYESNYTQEQQQYLENSQ AFSKYREPDYASQYSPWSCDTIGSYIGSKEGKSRDSMERMNAEGKGVEGRRRAAEARDDD PIIPFGSLPTVSRFGVISRTPKSGYLTAGPGQAMTLSQGTNGPKHGAATGWGAAGYIQPP QAHLSERPVKEREQLTMELQQVNQQINKQTAQADHPSPEEWSSGNISSQQLSLELHHVER EIGKRTRQIALEHLVSHDGSGANKLKPTENWQRAEHSLVLSEGCNGPSGVLQDGSVASCG LSCLTSKTSSLSLSADLSIAGGTDRKTNGVVPLCS NT seq 3168 nt NT seq  +upstreamnt  +downstreamnt atgcctgtgcaagcgccgcaatggacggaattcctgctgtgtcccatctgcacacagctg ttcgaggagagcctccgcaagcccatcagcctgggctgcggccacacagtctgcaagatg tgtctgaacaagctgcatcgcaaggcctgccccttcgaccagacggctatcgccaccgac attgagctgctgccagtcaacacagccctgctgcagctggtgggaggacaggtgcccaaa cggcagccgaccaccttggtgacaggggcagaggacatagcccactatgagaaagccagt gagtgtgtggaggagctggctcagtacctgaaacccctgagcaacagcagaggtgtgggg ctgagcaccagcagcgcccagagttctctgagtcggcccatgcagaggaagctggtgacc ctggtgcactgtcagctggtggaggaggagggccgggtgagggccacgcgggcggccagg tctctgggggagcgcaccgtcactgagctcattctacagcaccagaacccccagcagctc tcctccaacctgtgggctgcagtcagggcaaggggctgccagtttctcggcccagcgatg caggaggaggctctgaagctggtgcttttggctctggaggacggctccgctctatccagg aaggtcctggtgctgtttgtggtccagaggttagagccacgcttcccccaggcctccaag accagcataggccacgtggtgcagctcctctacagggcctcctgcttcaaggtgaccaag cgtgacgaggactcgtccctgatgcagttgaaggaggacttctggacgtacgaggcgctg cggcgcgaacacgactcccagatcgtccagatcgcaatggaggggggcctccgcatcgcc cctgaccagtggtcttccctgctctacggggaccagtcgcacaagtcccacatgcagtcc atcattgacaagttgcagacgccagcgtcgtttgctcagagtgttcaggagctgaccatc gccctgcagaggacaggtgacccggccaacctgaaccgcctgcgaccacacctggagctg ctagccaacatcgacccaagtccagactcccctccccccacgtgggagctgctggacacg ggcttggtggcagtgaagactgtggtacacggcctggtggacttcatccagaaccacagc aagaaggggagcgacccacaacagccaccccagcacagtaaatacaagacgtacatgtgt cgggacatgaagcagaaggggggctgtcctcgaggaaccagctgcaccttcgcccactct caggacgagctagaaaagtaccgtaagatgaacaagcgactggctgcccgccggcccctc agcttatccctgacgcagctgaacgaggttggcctattgcccgaggaggtggggatgctg gaggggctggcacacaagggcttgacgaatggcatggtggcgtcggtcacaggctccgcc ctgccccagctcatctcccgtggtgccgacccctcctacgagaccatgatgcggaagtcc cagggaagcctaagtgcccccagctctcctccagacttactggacccggtgcccaatcgg gccatggcccatcccaggatggcagtggaccacctggccatgcacaagcagatgcccagg aggccctccatgtacccccctcagcagggagaacttttctacccccctgagcccagggca cctccatcagccctgcagtatgaggcctcccagaacgccccaggtaaccccccctacccc taccagccctctcagtacccaccccagcctcgctacatccgaaacccccctcccaccaac gacccggccttgcccccctaccccggcacctacccccaggagcgccagtgtccccctccc cctcagctctcgagttcccacttctccaatgccaacccccaagggtttgcgcctcctccg cattatgacggccgtcgacaccccgcctacccccctccaccaccacagtcctattcccac cgggaggacccctccatgcctgcggacgaggcctccagagaaagataccttcctgagggt taccacccctctggcccccaccccagccacgtgaggccctacacccccagggagtcttac agccggccccagcccactcccagtctggactacttgcaccgccgacgccaggagatcatg gcccagctggaagacgggaagcaggtcactcccccacccttcgccccctcacctactctg ccacaccactacgagtccaactacacacaggagcaacagcagtatttggaaaactcacaa gcgttttcaaagtaccgcgagccagactacgcgagccagtactctccttggtcatgtgac actatcggctcctacattggcagcaaggaggggaagtccagagacagtatggagaggatg aatgctgaggggaaaggtgtggaaggcaggcgcagggctgcagaggccagagatgacgac cctatcatccccttcggctctctgcccaccgtgtcacgcttcggggtgatctcccgcacc cccaagtcgggctacttgactgctgggccggggcaggccatgaccctctcacaggggacc aatggccccaaacacggcgctgcaacagggtggggtgctgccgggtacatccagccccct caggcccacctcagtgaacggccagtcaaggagagggagcagctgacgatggagctccag caggtcaatcagcagatcaacaagcagactgcccaggcggaccatcccagcccggaggag tggtcgtcagggaacatctccagccaacagctgagcctggagctccaccatgtggagagg gagatcggcaagaggacccgccagatagccctggagcaccttgtgagtcatgatgggagt ggggcgaataagctgaagcccactgagaactggcagagagcggagcactcgttggtcctc agtgagggctgtaacggtcccagtggtgtgctgcaggacggcagtgtggccagctgtggt ttgtcctgccttaccagcaagacctcgtccctcagcctgtctgcagacctctccatcgct gggggcactgaccgaaagaccaacggcgtggtccccctgtgctcctag

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