Oncorhynchus kisutch (coho salmon): 109889085
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Entry
109889085 CDS
T09179
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oki03016
]
109889085 (trmt13)
Enzymes [BR:
oki01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
109889085 (trmt13)
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
109889085 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
109889085
NCBI-ProteinID:
XP_020335848
Ensembl:
ENSOKIG00005026809
LinkDB
All DBs
Position
LG4:complement(14902949..14913598)
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AA seq
468 aa
AA seq
DB search
MEVPTADGVSAPLPGRCAFYVEKKKRYCKMIVGSGKAYCGEHANAEKDCEKKRIPCPLDP
KHTVFEDLLAKHLKKCNSREKPKPLFYVQDINAGPAIVEDTPKDEVPLSDRSKAELNLLI
KKLKTAVKGFKCKHEENIQSHPALHEALNDPKNGDSAFKHLKQQASLLGNMEDLHLLGPN
RCFVEFGAGKGKLSHWIHVALKAYDDIHFLLVERSSARFKVDGKHQNSDTKFERLQVDIQ
HLDLRQVPLLQEKGLPVVGVGKHLCGAATDLALQCLLGSLETAPHGIKDQPPSKRSKLQQ
QPGESTGPELQPIPRVAGETAAGQELRVGGVAIALCCHHRCDWRHYVGKEFFKEKGLGAS
EFAAFLRMSSWATCGSRQATQTSPPQGQTDQTFEEEEHEATEEAELDSLEGVLNAEDREH
IGRLCKLLIDQGRVHFLQQKGFDSRLLYYTSSDVSLENVLLTALPASR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaggtccccaccgcggacggcgtgtctgcacctctgcctggaagatgtgctttttac
gtggaaaagaaaaaacgatactgcaaaatgatagttggaagtggaaaagcatattgtggg
gaacatgctaatgcggaaaaggactgtgagaaaaaaagaataccatgtcctctggatcca
aaacacactgtattcgaagatcttttagcaaaacatctgaagaagtgcaactccagagag
aaacccaaacctctgttctatgtgcaagatattaatgctggaccagccattgttgaggac
acccccaaagatgaggtacctttatcagatcgcagcaaagcagagttgaacctgctcata
aaaaaactgaagactgccgtcaaagggttcaaatgcaaacatgaagaaaatatacaatct
caccctgctctccatgaagctttgaatgatccaaagaatggggactctgcattcaaacac
ctgaagcaacaggcgtcccttttaggaaacatggaggatttgcacctgcttggacctaac
aggtgttttgttgagtttggtgcagggaaaggcaagctttcccactggatccatgtcgct
ctgaaagcctatgacgacatccatttcctgcttgtggaaagatcaagcgctcgttttaaa
gtagatggcaaacaccagaattctgataccaaatttgaaagactacaagtggatattcag
caccttgatttgcgtcaagttcctctcctccaagaaaagggacttccagtggttggagtg
ggcaaacacttgtgtggcgcagcaacagaccttgctcttcaatgcctactgggcagcttg
gagactgcaccccatgggatcaaagatcagccacccagcaagcgctcaaagctccagcag
cagcctggagagtctacaggaccggagcttcagcccattcccagggtggcaggggagaca
gctgccggccaggagctgagggtgggtggggtggccatcgccttgtgctgccaccaccgc
tgtgactggaggcattatgtaggcaaggagttcttcaaggagaaaggactaggtgcctct
gagttcgctgccttcctgcgcatgtcaagttgggcgacctgtggctcgagacaagcaaca
cagacctctccaccacaaggtcaaactgaccaaacatttgaggaagaggagcacgaggcg
acagaagaggctgaattagacagcttggaaggagtgttgaatgctgaggaccgtgaacac
ataggacgcctgtgcaagctgctgattgaccagggcagggttcacttcctgcagcagaag
ggatttgactcccgcctactctactacaccagctcagatgtttctctagaaaacgtgttg
ctgactgcacttcccgcctcccggtga
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