Oncorhynchus kisutch (coho salmon): 109889099
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Entry
109889099 CDS
T09179
Name
(RefSeq) survival motor neuron protein-like isoform X1
KO
K13129
survival motor neuron protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109889099
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
109889099
BRITE hierarchy
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GFIT
Motif
Pfam:
SMN_Tudor
Tudor_3
TUDOR
SMN_YG-box
Motif
Other DBs
NCBI-GeneID:
109889099
NCBI-ProteinID:
XP_020335870
Ensembl:
ENSOKIG00005031168
UniProt:
A0A8C7IFG8
LinkDB
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Position
LG4:15417928..15431148
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AA seq
383 aa
AA seq
DB search
MAECPASIVLRSGGVESSNIEKESVTKLLPNLQKLFESELSESCVPSLETVDPRANSKSD
EKESDEKLADNPQKLSESCVPSKGPFDPKANLKWEIGSHCKAVWSEDGRVYPATLVWLEG
ERCKVKFDNYGNEEEMDLSAMLPEAADQPRKEKRVWMLGSRCRAVYSEDGLVYPAVLVWM
RGERCRVKFEGYGNEEELELSTLLSPDDLGRHCGRATAKAVEGFRSTSNNSADWKKDREW
RTPQQEGQEEPSSPRPPEFPPGKGFNLGNEQGNKKKPSSRKEEPNGRSREPNDHPFPFFP
PVPPPNGSLDFLSLLPPPPPPPCVWPPRAGLVDAGDGLGSSITDLSSMLLSWYLCGYHTG
CYMAMQQTAASHKRAHKEKRAEE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatgtccagcaagtattgtattgcgaagtggaggagtcgagagctcaaacatc
gaaaaagagagtgtcacgaagcttctccccaatctacagaaactgtttgagtcagaactg
tctgaatcttgtgtgccaagtctggaaacagttgacccaagggcaaactcaaagagcgat
gaaaaggagagcgatgagaagcttgcagacaatccacagaaactctcagaatcttgtgtg
ccaagtaagggaccgtttgacccaaaggcaaacttaaagtgggagatagggtcccactgc
aaggctgtgtggtcagaggatgggcgggtttatcctgccaccctggtctggttggagggg
gagcgctgcaaggtgaagtttgacaactatggaaacgaggaagagatggatctgagcgcc
atgctacctgaagctgctgaccagccccggaaggagaaacgggtgtggatgctgggttcc
cggtgccgtgctgtgtactcagaggatggcctggtctacccagcggtgctggtgtggatg
agaggggaacgctgccgggtgaagtttgaaggctacgggaacgaggaggagctggagctg
agcaccctgctatcgccagatgacctgggacggcactgtggaagagctactgccaaggct
gtggaagggttcaggtccactagtaacaacagcgcagactggaagaaggatagagagtgg
aggacacctcaacaagagggacaagaggagccttcctcacctcgaccacctgagtttcct
ccaggaaaaggctttaaccttggcaatgagcaggggaataagaagaagccaagtagtcgg
aaagaggaaccaaatggccggagtcgggaaccaaatgatcacccgtttcctttttttcct
ccagtgccaccgcccaatgggtctttggacttcctgtcactcctgcctcctcctccacct
ccaccgtgtgtatggcccccccgagcagggctggtggatgctggcgatgggctaggctcg
tccattacagacttatccagcatgctgctctcctggtacctgtgtggctaccacactggc
tgctacatggcaatgcagcagacagcggcaagtcacaagagggctcataaagagaaacgg
gcagaggaataa
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