Oncorhynchus kisutch (coho salmon): 109889112
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Entry
109889112 CDS
T09179
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03010
Ribosome
oki04120
Ubiquitin mediated proteolysis
oki04137
Mitophagy - animal
oki04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
109889112
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109889112
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109889112
04137 Mitophagy - animal
109889112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
oki03011
]
109889112
04121 Ubiquitin system [BR:
oki04121
]
109889112
Ribosome [BR:
oki03011
]
Ribosomal proteins
Eukaryotes
Large subunit
109889112
Archaea
109889112
Ubiquitin system [BR:
oki04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
109889112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
zf-C4pol
OTU1_UBXL
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
109889112
NCBI-ProteinID:
XP_020335898
Ensembl:
ENSOKIG00005031780
LinkDB
All DBs
Position
LG4:16249669..16251241
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagacgttgacggggaaaacaatcacccttgaggttgagcccagc
gatactattgaaaatgtcaaggccaagatccaggataaggaaggcattcctcctgatcaa
cagcgtctgatcttcgctggcaaacaacttgaggatggtcgcaccttgtcggactacaac
atccagaaagagtccacccttcatcttgtgctgcgtcttcgtggaggcattatcgagcca
tctttgagacagctggcccagaagtacaactgtgacaaaatgatctgccgcaaatgctac
gctcgcctccatcctcgtgctgtcaactgccgcaagaagaagtgtggacacacaaacaac
ctgcgccccaagaagaagctgaagtaa
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integrated database retrieval system