Oncorhynchus kisutch (coho salmon): 109889204
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Entry
109889204 CDS
T09179
Name
(RefSeq) fibrillin-2-like isoform X1
KO
K23342
fibrillin 2/3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109889204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oki00536
]
109889204
Glycosaminoglycan binding proteins [BR:
oki00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109889204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
TB
hEGF
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
109889204
NCBI-ProteinID:
XP_031678460
Ensembl:
ENSOKIG00005001689
LinkDB
All DBs
Position
LG4:19461406..19581009
Genome browser
AA seq
2882 aa
AA seq
DB search
MGAGKLARVLLGWAAVCLASVHTAYGQAGDGGYQASRFTGKVDEREVQRVRRRGQETLRG
PNVCGSRFHSYCCPGWKTLPAGNQCIVPICRNSCGDGFCSRPNMCTCGSGQLSPSCGAGA
GVQSCNVRCMNGGSCQEDSCSCQKGYTGNHCGQPVCENGCQNGGRCIGPNRCACVYGFTG
PQCERDYRTGPCFTQVNNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEMCPAQPHPCRRG
FIPNIRSGACQDVDECQAIPGLCAGGNCINTVGSYECKCPAGHRQSDTSHKCEDIDECST
IPGVCDGGECTNTAGSYVCTCPRGYITSTDGARCVDQRVGTCFSALANGRCAGDLQGQYT
KMQCCCDTGRCWASGQIPEMCPVRGSDEYRRLCIEGVPHGTGNGGFPHGHGYSYGYKLNP
HGPNGNGHHGNGGGIGGGGIGGGGQGGGGNGFGGNGGGRNIVPVSVNETVDVCKHFTNLC
LNGRCIPTPTSYRCECNMGYRQDVRGECIDVDECVSNPCVNGDCVNTPGSYHCKCHEGYQ
GTPTKQACIDIDECIVNGVMCRNGRCVNTDGSFQCICNAGFELTPDGKNCIDHDECDTTN
MCLNGMCINEDGSFKCICKTGFALAPNGRYCTDIDECQTPGICMNGRCMNSEGSFRCECP
PGLAIDVDGRVCVDTHMRTTCYGALKMGTCSRPFPGAVTKSECCCASPEHGFGEPCQPCP
ARNSAEFQAVCSSGIGITADGRDINECALDPDICQNGMCENLRGSYRCICNIGYESDSSG
KNCVDINECLVNRLLCDNGLCRNTPGSYTCSCPKGFVFKPDSETCEDINECESSPCVNGV
CRNIAGSFNCECSHGSKLDSTNTICVDSMKGTCWLNIQDGRCEVNINGATLKSECCSTLG
AAWGSPCERCEIDTACSRGFARMKGVNCEDINECEVFPGVCTNGRCVNTQGSFRCECGEG
LTLDGSGRTCVDVRSEQCYMKWHEDECGEPLPGRYRVDMCCCSVGAAWGIDCEECPKAGT
PEYKAICPRGPGFANRGDILTGRPFYKDVNECKVFNGLCSHGTCRNTIGSFKCRCSSGFA
LNMEERNCTDIDECHISPDLCGHGTCVNTPGSFECECFEGYESGFMMMKNCMDFDECERN
PLLCIGGTCLNTEGSYECECPPGHQLSPDGSSCEDVNECQLSDNLCKNGHCVNMVGNYQC
SCDTGYQVTPDRQGCVDIDECTIMNGGCDTHCTNSEGSYECSCSEGYALMPDLRTCADID
ECEDSPDICDGGQCTNVPGEYRCLCYDGFMASMDMRTCIDVNECELNPNICLHGDCENTK
GSFICHCQLGYFVKKGSTGCTDIDECEIGAHNCDMHAACLNVPGSFKCRCRDGWVGDGIK
CVDVDECSTEEHNCNLNADCVNTPGSYRCACKEGFNGDGFSCSDMDECADNVNLCENGQC
LNAPGGYRCECEMGFTPTEDSKACQDIDECNFQNICVFGTCQNLPGMFRCVCDDGYELDR
SGGNCTDINECADPVNCINGLCVNTPGSYLCNCPPDFELNPTGVGCVDTRVGNCFLDTLA
RGDGGISCSAEIGVGVTRASCCCSLGGAWGNPCELCPSINSTEYKTLCPGGEGFRPNPIT
VILEDIDECQELPGLCQGGNCVNTFGSFQCECPAGYYLNEETRICEDIDECTAHIGICGP
GTCYNTLGNYTCVCPPEYMQVNGGNNCMDMRKSVCYRNFNDTCENELSFNMTKKMCCCAY
NVGKAWNKPCEACPTPATSEYQLLCGNQAPGFIIDIHTGKPIDIDECREIPGICANGVCI
NQIGSFRCECPVGFSYNNILLICEDIDECNSGDNLCQRNANCINIPGSYRCECSPGFKLS
PSGACVDRNECQEIPNVCSHGECIDTQGSYRCLCHNGFKATADQTMCMDIDECDRQPCGN
GTCKNTVGSYNCLCFSGFELTHNNDCMDIDECSALVGQVCRNGQCINGLGSFQCLCQEGY
ELTLDGKNCVDINECVSLPGTCSPGICQNLDGSFRCICPAGYEVQNDQCIDINECEVEPN
ICQFGTCTNTPGSFQCICQNGFVLSDNGRRCFDTRESFCFTRFESGKCSVPKAFNTTKAK
CCCSKMPGEGWGDPCELCPRDSDAAFDSLCPYGHGALPGRGDAREDMNECLDNPGVCQNG
VCINTDGSFRCECPFGYNLDYTGINCVDTDECSIGNPCGNGTCTNVLGGFECSCHEGFEP
GPMMTCEDINECSLNPLLCAFRCVNTFGSYECMCPSGYVLRDDHRMCRDQDECSEGLDDC
ESKDMSCKNLIGTFMCICPPGLQHRPDGEGCMDLNECRAKPGICKNGRCENTVGSYRCVC
NEGFQPSSTGTDCIDNRQGFCFTEVLQTMCQQGSTNRNSVTKSECCCNLGRGWGPQCELC
PLPGTVQYKRMCPLGPGYTTDGRDINECTVMPDLCKNGQCINTIGSFRCHCNVGYTTDFT
GTSCIDMDECSASPRPCNFLCKNTEGSYLCSCPRGYTLQPDGKTCKDLDECSTKQHNCQF
LCVNTIGGFTCKCPAGFTQHQTACIDNNECNGQNSVCGSRASCVNTPGSFNCDCGKGFSL
DTTGLECEDVDECGSNHRCQHGCQNMMGGFRCGCPQGYVQHYQWNQCVDENECSGVSVCG
SASCYNTLGSFKCVCPSGFDFELGGGGCQDVNECSMGSNPCSFGCSNTDGGYLCGCPGGY
YRAGQGHCISGQGFQDQFSSEGDDEDSLSPEACYECKINGDVGKKGRHRRHSAGDNDLKE
VSMASLDTQESIPMNLSLASLQNKEPLLELLPALEPLEHHVRYVITHGNQDEHFRLLERH
NGKSVLRLGRKPPPPGSYRLEIASLPLFGPRRFRQLEEEHDSDYLLGEIGDALRIKLHIH
LN
NT seq
8649 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagggaagctggcccgggtgctgttgggatgggcggccgtgtgcttggcctcg
gtccacactgcgtacggccaggcgggagacggagggtaccaagccagccgcttcacagga
aaggtggacgagagggaggtgcagagggttcgcaggagaggacaggagacactcagaggg
cccaatgtgtgtggttctcgcttccactcctactgttgccctggctggaagactctgcct
gcagggaaccagtgtatcgtcccaatctgccgtaactcgtgtggtgatggcttctgctcc
agacccaacatgtgcacttgcggcagcggacagctctcccccagctgtggggccggtgcc
ggagtgcagagctgtaacgtcaggtgtatgaacggaggcagttgccaggaagactcctgc
tcctgtcagaagggttacaccggcaatcactgtggacagcctgtgtgtgagaatggttgc
cagaacggagggcgctgtattgggcccaacagatgtgcctgtgtctacggcttcactggc
ccgcagtgtgagagagactacaggaccgggccctgttttacgcaggtcaacaaccagatg
tgccagggccagctgagtggcattgtgtgcaccaagaccctgtgctgtgccaccattgga
cgggcatggggacacccctgtgagatgtgccctgcacagcctcacccctgtcgccgaggc
ttcatccccaacatccgcagtggagcgtgccaggatgtggatgagtgtcaggccatccct
gggctgtgtgcaggaggtaactgtatcaacacagttggctcctatgagtgtaaatgtccc
gcgggccatcgccagagtgacaccagccacaagtgcgaagatattgacgagtgcagcact
atcccaggtgtgtgtgacggaggtgaatgcaccaacacagccggtagctacgtctgcacc
tgtccccgtggttacatcacaagcactgacggtgccagatgtgtagaccagcgtgtgggc
acgtgtttctccgcgttggcgaacgggcgctgtgcgggtgacctgcagggccagtatacc
aagatgcagtgctgctgtgacacgggccgctgctgggcttctggacagatccctgagatg
tgccctgtcaggggatccgatgagtacagaaggctgtgcatcgagggggtgccccatgga
acaggtaacggaggtttcccccacggccacggttacagctacggctacaaactcaacccc
cacgggcctaacggaaacggtcaccatggcaacggaggaggaatcggaggaggaggaatc
ggaggagggggacagggaggaggaggcaatggttttggaggaaacggcggcgggcgtaat
atcgtccctgtgtcagtcaatgagaccgttgacgtgtgtaaacatttcaccaacctgtgt
ttgaacggccgctgtatccccaccccgaccagctaccgctgtgaatgtaacatgggctac
aggcaggacgtacgcggggagtgtattgatgtggatgagtgcgtcagcaacccttgtgtc
aacggagactgtgtcaacacacctggatcgtaccactgcaagtgtcacgaaggctaccag
ggcacccccaccaaacaggcctgcattgatattgatgagtgcatcgtgaacggagtgatg
tgtcgtaacggacgttgtgtcaacactgacggaagcttccagtgcatttgcaacgctggc
tttgagctcactcctgatggaaagaactgcatagatcatgatgagtgtgacaccaccaac
atgtgtctcaatggaatgtgtatcaacgaggacggtagcttcaagtgtatctgcaaaact
ggcttcgccctggcacctaacggacgttactgcacagacattgatgagtgccagacacca
ggcatctgtatgaacggacgctgtatgaactctgagggctccttccgctgtgagtgccca
ccaggcctggccatcgatgtggacggaagagtgtgtgtcgacacacacatgcgtaccacc
tgctacggtgccctcaagatgggcacgtgctcgcgtccctttcctggcgccgtcactaag
tctgagtgctgctgtgccagtcctgaacacggcttcggagagccctgccaaccctgccct
gcccgcaactctgctgagttccaggccgtgtgcagcagtgggattggcatcaccgctgac
ggcagagacatcaacgagtgtgccttggaccctgacatctgtcagaacggcatgtgtgag
aacctgagagggagctaccgttgcatctgtaacatcggctacgagtccgactccagcgga
aagaactgcgtggacatcaatgagtgcctagtgaaccgtctgctgtgtgacaacggcctg
tgtagaaacacccccggcagctacacctgctcctgtcccaaaggcttcgtcttcaaacct
gactctgagacctgcgaagatatcaacgagtgtgagtccagcccgtgtgtcaacggagtc
tgccgcaacatcgccgggtccttcaactgcgagtgttcccacggcagcaagctggactcc
accaacaccatctgcgtggacagcatgaagggaacgtgctggctgaacatccaagatggc
cgctgtgaggtcaacatcaacggtgccacgctcaagtccgagtgctgctctacactggga
gctgcctggggcagtccctgtgaacgctgcgagatcgacactgcctgctctagagggttc
gctcgtatgaaaggagtcaactgtgaagacatcaatgagtgtgaggtgttcccaggggtg
tgtaccaacgggcgctgtgtcaacacccagggctccttccgctgtgagtgtggcgagggg
ctcactctggacgggagtggacgcacatgcgtggacgtgcgcagtgagcagtgctacatg
aagtggcacgaggatgagtgtggcgagccactgcccggtcgctaccgcgtggacatgtgc
tgctgctccgtgggcgcggcctggggcattgactgtgaggagtgtcccaaggcgggaacc
ccggagtacaaggccatctgccccagaggaccaggctttgccaaccgaggagacatcctg
actggcagacccttctacaaagatgtaaatgagtgtaaggtgttcaacggcctgtgctcc
cacggaacctgccgcaacaccatcggcagcttcaagtgtcgctgcagcagtggcttcgcc
ctcaacatggaggagaggaactgcacagatattgatgaatgtcatatctctccggacctg
tgtggccacggcacctgcgtgaacacccctggcagctttgagtgtgaatgcttcgagggc
tatgaaagtggcttcatgatgatgaagaactgcatggattttgatgagtgtgagcggaac
cctctgctgtgtataggaggcacctgtctgaacacagaggggagttatgagtgtgaatgt
ccccccggacaccagcttagtcccgatggttcctcctgcgaagatgtgaacgagtgccag
ctgagtgacaacctgtgtaagaacggccactgtgtcaacatggtggggaactaccagtgc
tcctgtgacactggttaccaggttacaccagacagacagggctgtgtggatattgatgag
tgtaccatcatgaacggaggctgtgacacacactgtaccaactcagagggcagctacgag
tgcagctgtagtgagggatacgctctcatgcctgacctcaggacctgcgctgatatagat
gagtgtgaggacagccctgatatctgtgatggaggccagtgcaccaacgtgcctggagag
taccgctgtctctgctacgacggattcatggcctccatggacatgaggacctgcatcgat
gtgaatgagtgtgagctgaaccctaacatctgtctacatggggactgtgagaacaccaag
ggatccttcatctgccactgccagctggggtactttgttaagaagggctccaccggctgc
acagatattgatgagtgtgagattggggctcacaactgtgacatgcatgctgcctgtctc
aacgttcccgggagcttcaagtgtcgttgtcgtgatggctgggtgggagacggcatcaag
tgtgtagatgtggatgagtgttccactgaggagcacaactgcaatctcaatgcagactgt
gtcaacacccccggctcctaccgctgtgcctgcaaggagggcttcaacggggacggcttc
tcctgttctgatatggatgagtgtgctgacaacgtgaacctgtgtgagaatggccagtgt
ctgaacgctccggggggctaccgctgtgaatgtgagatgggcttcacccccaccgaggac
agcaaggcctgccaggatattgacgaatgtaacttccagaacatctgtgtgtttggaacg
tgtcagaatctaccggggatgttccggtgtgtgtgtgacgacgggtacgagctggaccgc
agcggaggaaactgtactgacattaacgagtgtgcggaccctgtgaactgcatcaatggc
ttgtgtgtgaacacacccggaagctacctgtgtaactgccctccggacttcgagctcaac
cctactggagtgggctgtgtggacacgcgagtgggcaactgtttcctggatacgttggct
cgtggcgacgggggcatctcctgcagcgctgagatcggcgtgggcgtcacccgcgcctcc
tgctgctgctccctgggaggagcctggggaaacccctgtgaactctgcccctcaatcaac
tccactgagtacaagacactgtgtcctggaggagagggcttcagacccaaccccatcact
gtcatcctggaagacattgatgagtgtcaggagctgccaggcctgtgccagggtggtaac
tgtgtcaacaccttcggcagcttccagtgcgagtgccctgcaggctactacctcaacgag
gagacacgcatctgtgaggatattgatgagtgcacagcccacattggaatctgtggccct
ggtacctgctacaacaccttggggaactatacctgcgtgtgtcctcctgagtacatgcag
gtcaacggaggaaacaactgcatggatatgaggaagagcgtgtgttaccgcaactttaac
gacacgtgtgagaacgagctgtcgttcaacatgaccaagaagatgtgctgctgtgcctac
aacgttggcaaggcctggaacaagccctgtgaagcctgccctacccctgccacctcggag
taccagttactgtgtgggaaccaggctcctgggttcatcatagatatccacacaggcaag
cccatcgatattgatgagtgtcgagagatcccggggatatgtgccaacggagtgtgtatc
aaccagataggaagcttccgctgtgaatgtcccgtgggtttcagctataacaatatactg
ctcatctgtgaagatattgacgagtgtaacagtggagacaacctgtgccaacgcaacgcc
aactgtatcaacatcccagggagctaccgctgcgagtgctcgccaggcttcaagctgtcc
cccagcggggcctgcgtggaccgtaacgagtgccaggagatccctaacgtgtgtagccac
ggagagtgtatcgacacccagggcagctaccgctgtctctgccacaacggtttcaaggcc
accgccgaccagaccatgtgcatggatatcgatgagtgtgacagacagccgtgtgggaac
ggaacctgtaagaacacagtgggctcctacaactgtctctgcttctctggcttcgagctc
acgcacaacaatgactgcatggacattgatgagtgcagtgcgttggtgggtcaggtgtgt
aggaacggccagtgtatcaacggcctgggctccttccagtgtctctgtcaggaaggctac
gaactcaccctagacggaaagaactgtgttgatatcaatgaatgtgtgagtcttcctggg
acctgctctcctggaatctgtcagaacctggatggatccttccgctgtatctgcccagct
ggatacgaggtccagaacgatcagtgtatagatatcaacgagtgtgaggtggagcccaat
atctgccagtttggcacgtgcaccaacaccccaggaagcttccagtgtatctgccagaat
ggcttcgtcctgtctgacaatggacgccgctgctttgatactagagagagcttctgcttc
acccgctttgagtctggcaagtgttctgtacctaaagccttcaacaccaccaaggccaag
tgctgctgcagcaagatgccaggcgagggctggggagacccctgcgagctgtgcccacgc
gatagcgacgcagcctttgacagcctgtgtccctacggccatggagctttgcctggacga
ggggacgcccgtgaggatatgaatgagtgtctggacaacccaggcgtctgtcagaacggt
gtctgtatcaacacggatggatcgttccgctgcgagtgtccctttgggtacaacctggac
tacactgggatcaactgtgttgacactgatgagtgctctataggaaacccctgtggtaat
gggacctgtactaacgtgttgggaggcttcgagtgctcctgtcatgaaggcttcgaaccc
ggacctatgatgacctgtgaagatatcaacgagtgttctctgaaccccctgctgtgtgcc
ttccgctgtgtcaatacttttggttcgtacgagtgcatgtgtccctcgggctacgtgctg
cgagatgaccaccgcatgtgcagagaccaggatgagtgttcagaggggctggatgactgt
gagtccaaggacatgtcctgtaagaacctgattggcacctttatgtgtatctgcccccct
ggcctgcagcacagacctgacggagagggctgcatggacctgaatgagtgtcgtgcaaag
cctggcatctgtaagaacgggcgctgtgagaacacagtgggaagctaccgctgtgtgtgt
aacgagggcttccagcccagctccaccggaacggactgtatcgataaccgacagggcttc
tgtttcaccgaggtgctccagactatgtgccagcagggctccaccaataggaacagtgtc
accaaatctgagtgctgctgcaacctcggacgtggctggggaccccagtgtgagctctgc
cctctgcctggcacagtgcagtacaagaggatgtgcccactgggacccgggtacaccacc
gacggcagagacatcaatgagtgcacggtgatgccagacctgtgtaagaacggccagtgc
atcaacaccatcggatcgttccgctgccactgcaacgtgggttataccaccgacttcacc
ggcacctcctgcattgatatggatgagtgttccgcatctcccaggccctgtaacttcctg
tgtaagaacacagagggcagctacctgtgctcctgccccagaggatacactctgcagcct
gacggaaagacctgcaaagatctggatgagtgttccaccaagcagcacaactgtcagttc
ctgtgtgtcaacaccatcggagggtttacatgcaagtgtcctgcaggtttcacccagcac
cagaccgcctgcattgacaacaatgagtgtaatgggcagaacagtgtgtgtggctccaga
gcctcctgtgtcaacactcccggcagcttcaactgtgactgtgggaaaggcttttctctg
gacactactggcctggagtgtgaagatgtggatgagtgtggtagtaaccatcgctgtcag
catggctgtcagaacatgatgggaggtttccgctgtggctgtcctcagggctatgtgcaa
cactaccagtggaaccagtgtgtggatgagaacgagtgttcgggtgtgtctgtgtgtggc
tcggcctcctgctacaacaccctgggcagctttaagtgtgtgtgtccatccggttttgac
tttgagctgggtgggggtgggtgccaggatgtcaatgagtgttccatgggcagtaacccc
tgcagcttcggctgctccaacacagacggaggatacctgtgtggctgtcctggaggttac
tacagggctggacagggtcattgtatttcaggtcagggcttccaggaccagtttagctca
gagggagatgatgaggacagtctgtctccagaggcctgctacgaatgtaagatcaacgga
gacgtcggcaagaagggccgacacagacgtcactctgctggagacaacgacctcaaggag
gtgagcatggccagcctagacacccaggagtccatccccatgaacctgagcctggcctcg
ctgcaaaacaaggagcccctgctggagctgctgccagccctggagcccctggagcaccat
gtgcgctacgtcatcacccacggcaaccaggacgagcacttccgcctgctggaacgccac
aatgggaagagcgtgctgaggttgggcaggaagccacctccccctggctcctaccgcctg
gagatcgctagtctgcccctgttcgggccgcggcgcttccgacagctggaggaggaacac
gacagcgactacctgctgggagagataggagacgccctgcgcatcaagctgcacatccac
ctgaactga
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