Oncorhynchus kisutch (coho salmon): 109889214
Help
Entry
109889214 CDS
T09179
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109889214
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109889214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
109889214
NCBI-ProteinID:
XP_020336057
Ensembl:
ENSOKIG00005003865
UniProt:
A0A8C7D3U3
LinkDB
All DBs
Position
LG4:complement(19826856..19933274)
Genome browser
AA seq
1654 aa
AA seq
DB search
MPSLPSPSPAMDGENYLHPEGPQLDSSIFEVASSNMESYLYPSGSWASFSQQSGGYNAHC
PMQSGNQQYHLNAPMPDLDMFSHSGFHDDFLNLPRNGDFPQNLSCIDDLSNSLFSSPADS
LSDYTDAQAFIPTDNLAHVPTIWDINTPAQSQLELNANRFQDLNSLEDIAAIISTPPLGG
YQQTQRNQTPAEEEAEEEEEETEELGHVDTYADYKPSKSTIGISHPDIVVETNTLSSVPP
PDITYTLSIPDSTINCGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKGRTV
AGIILENYLKGRKKALWFSVSNDLKYDAERDLKDIDAPTIPVHALNKIKYGDTATSEGVL
FATYSALIGESQAGGQHRTRLKQILDWCKPGFDGVIVFDECHKAKNATSTKMGKAVLDLQ
HNLPLARVVYASATGASEPKNMIYMSRLGIWGEGTPFKTFDDFLHAIEKRGVGAMEIVAM
DMKVSGMYIARQLSFSGVSFRIEEIGLDDDFKLVYNKAAKLWAEALAVFMRAADALCLVS
RKSLWGQFWSSHQRFFKYLCIAAKVRCLVELAKKELKAGKCIVIGLQSTGEARTREVLDE
NDGHLDRFVSAAEGVFKALVQKHFPSEKQRREKARGNKRKRKPRGRQPKFPKHTMVHLGG
VINISDDSSTDTDGMDTDSNSSPDSLMDNNDDVIFVQHTSCHTASIEKMKQSLLNKIADL
GKELPLNTLDELIDQFGGPEMVSEMTGRKGRVVRRPDGSVRYESRAEQSHTIDHINLKEK
DRFMCGEKMVAIISEAASSGISLQADKRVKNQRRRVHITLELPWSADRAIQQFGRTHRSN
QVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTKA
LDKITKAILGHIESKVSPPKGYPGGDALFFRDMKHGMMDVGIFCKEPRFGLSTEKDCSIT
KFLNRILGLEVHKQNSLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDEIYEEKQETF
MTVGNPQDGQVVLYKISVDRGMPWEEAYEKVQNLNSPDEGFYLSHKLRGNHPCVLLAEQG
RGRNFIVYKPNIGKQAHPESLDNLQLRYRKVTPDHAKDSWESQFNFSFGKCSHANWNGKC
KKIEEGQECLQGMRLRQYHMLCGALLRVWKYVADVVSDITCSSILQIVRLKTKNSNKQVG
IKIPENCVARVRQELLKMDEEVKRRRKEKEQQRAQEQQRAQEQRLAEERQLQNQHLLAKL
YSQRQTLNHSFNNQNLSQGLKTQHLSLAQANPLQVKPLLQPKPSQLKPQLGPVNQLPSMA
SPTSHFSNFPHHFPSLHLLQPDPSSSSMPPRTGEEVLDLTVSPSPSPDSKERGLVLDCLT
RDGFGLDSLILLSELAAQNTAHKLQQPLQPLPPLTKPQQLLSPQQIQLQSPQQIQPQLQS
PQQIHPQLQSPQQIHPQLQSPQQIQLQSPQQIQLQSPQQIQPQLQSPQQIQPQLQLPQQI
QPQLQSPQQIQPQLQSPPQIQPQLQSPQQIQQRLDSPTLINSDHQDYYDILKLLEDPDHL
PYSLSSQTTTNPSTSSNTVAHVSSGLLSSPSTPSSSLFSPSSLAPSEQQPLPLANGHCST
DALINVREVLDNMLRTSADRQTVIHYRLPEWDSV
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcctcccatcaccctcaccggccatggacggggagaactacctgcacccagag
gggccacagctggacagcagcattttcgaagttgcctcttccaatatggagagttatctg
tatccctctggttcctgggcatcattttcacagcagtctggaggctacaacgcacactgc
cctatgcaatctggaaaccagcaataccacttgaatgctcccatgcccgatttggacatg
ttcagccattcagggttccatgacgatttcctcaacctccccaggaacggagacttccct
cagaacctgtcctgcatcgatgacctctccaactctctgttctcctctccggccgactcg
ctgtcagactacaccgatgcccaggccttcatccccacagataacctggcccacgtgccc
acgatatgggacataaacacaccagcacagagccagctggagctgaatgccaacaggttt
caggatttgaacagtttggaggatatcgctgccattatcagcaccccacctttgggagga
taccagcagactcagagaaaccagactccggcagaagaggaggcagaggaggaggaggaa
gagacagaggagctgggacatgtagacacctacgctgactacaaaccatccaaatccacc
atagggatctcccacccagacatagtggtggagaccaacacgctgtccagcgtccctcca
cctgacatcacctacactctgtccattcctgactccaccatcaactgtggcctgctctct
gccctgcagctggaggccatcatatacgcatgccagcaacacgaggtaattctgcagaac
aaccagagagcaggcttcctgataggagacggggccggagtagggaaaggccgcacagtg
gccggcatcatcctggagaattacctaaaggggaggaagaaagcgctatggtttagtgta
tccaatgacctgaaatacgacgcagagagagatctgaaagacatagatgctcccaccatt
cctgtgcatgccttaaacaagataaagtatggagacacagctacctcagaaggagtcctg
tttgcgacatactctgcactgatcggggagagccaagcaggtgggcagcaccgcaccaga
ctcaagcagatcctggactggtgcaagcccggctttgatggagttattgtgtttgacgaa
tgccacaaggccaagaatgctacgtccaccaagatgggcaaggccgtgctggacctgcag
cacaacctgccgctggccagggtggtttacgccagtgccacaggtgcctctgagccaaag
aacatgatctatatgagccgcctggggatctggggcgagggcacgcccttcaagaccttt
gacgacttcctgcacgccatcgagaagaggggtgtaggcgcgatggagattgttgccatg
gacatgaaggtgagtgggatgtacatcgcccggcaactgagcttctcaggggtgtccttc
cgcatcgaggagatcggtctggacgacgacttcaaactggtctacaacaaagctgccaaa
ctgtgggcggaggcgctggccgtgttcatgcgtgcagcggacgcgctgtgtctggtcagc
aggaagtccctgtggggtcagttctggtcttcccaccagcgcttcttcaaatacctctgc
atcgccgccaaggttcgctgcctggtggagctggccaagaaagaactgaaagctggcaag
tgcatcgtgattggtctacagtccacaggagaggcccgaaccagagaggtcctggatgag
aacgatgggcacctggacagattcgtatctgcagcagagggtgtgttcaaagctctggta
cagaaacactttccctccgagaagcagaggagagagaaggcacgtggaaacaagagaaaa
cgtaagcccaggggccggcagcccaaattcccaaagcacaccatggttcatctggggggt
gtgatcaacatcagtgacgacagcagcacggacacggacggcatggacaccgactccaac
tcctcgccagactccctgatggacaataacgatgacgtcatcttcgtccagcacaccagc
tgtcacacagccagtatagagaagatgaagcagagcctcctgaacaagatcgctgacctg
ggaaaggaactacctctgaacactctggacgagctcattgaccagtttggaggaccagag
atggtatcggagatgacgggtcgtaagggtcgcgtggtgcggcgtcctgacggaagcgtg
cgctacgagtcgcgtgcagagcagagccataccatagaccacatcaacctcaaggagaag
gaccgcttcatgtgtggagagaagatggtggccatcatctcagaggcagccagctcaggc
atctccttgcaggcagacaagcgggtgaagaaccagcgtcggagggtccacataacccta
gagctgccctggagtgcagacagagccatccagcagtttggtcgtacccatcgctctaac
caggtgacggctccagagtacatcttcctcatctctgagctggccggggaaagacgcttc
gcctccattgtggccaagagactggagagcctgggtgcattgacccacggtgacaggaga
gccacagagtccagagacctgagcaaatacaactttgaaaacaagtacggtaccaaggct
ctggataagatcacgaaagccatcctgggccacatcgagagcaaggtgtcccctcccaaa
ggttaccccgggggtgatgctctgttcttcagagacatgaagcatggcatgatggatgtg
ggtatcttctgcaaggagccacggtttggtctcagcactgagaaagactgcagcatcacc
aagttcctcaacaggatcctgggcctggaggtccacaagcagaactctctgttccagtac
ttcaccgacaactttgactacctgatcgagaaggacaaaaaggagggcaaatacgacatg
ggaatcctagatctggccccaggtaatgatgaaatctacgaggagaagcaagagaccttc
atgacagtgggaaacccccaggacggacaggtcgtgctctacaagatcagcgtggacaga
ggtatgccctgggaggaggcctatgagaaggtccagaacctcaacagtcctgacgagggc
ttctacctctcacacaagttgcgggggaaccacccgtgtgtgctgctggcggagcagggt
cgagggaggaacttcatcgtctacaagcccaacatcgggaagcaggcccacccagagagc
ctggacaacctgcagctacgctaccgcaaggtgactccagaccatgccaaggacagctgg
gagagccagttcaacttctcctttgggaaatgtagccatgctaactggaacgggaagtgt
aagaagatcgaggagggtcaggagtgtctgcagggaatgcgtctgcgccagtaccacatg
ctgtgtggtgcgctactgcgcgtctggaagtatgtggctgacgtggtctctgacatcacc
tgctccagcatccttcagatcgtacgcctcaaaaccaaaaatagtaacaagcaagtcggt
atcaagatcccagagaactgtgtggcccgagtgcggcaggaacttctcaaaatggacgag
gaggtgaagagaaggcgcaaggagaaggagcagcagcgcgcccaggagcagcagcgcgcc
caggagcagcggctagccgaggagcggcagcttcagaaccaacacctgctggccaagctt
tacagccagagacagaccctgaaccacagcttcaacaaccagaacttgtcgcagggcctc
aagacccaacacctgagcctggcccaggccaatcctctacaggtcaagcctctactccag
cccaaaccttcacagctcaaaccccagctcggtccagtcaaccagctccccagcatggcc
agccccacctcccacttctccaatttcccccaccacttcccctccctgcacctcctgcag
cccgacccctcctcctcctccatgccccctcggaccggggaggaggtcttagacctgacg
gtgagcccctctccctccccagacagcaaagagagaggcctggtcctcgactgcctgacc
agagacggctttggcctggactctctgatattgctgagcgagctcgccgcccagaacact
gcacacaaactgcagcaacctctacagccactgccaccactgacaaagccacagcagcta
ctgtcgccacagcagatacagctacagtcgccacagcagatacaaccacagctacagtca
ccacagcagatacatccacagctacagtcgccacagcagatacacccacagctacagtcg
ccacagcagatacagctacagtcgccacagcagatacagctacagtcgccacagcagata
caaccacagctacagtcgccacagcagatacagccacagctacagttgccacagcagata
caaccacagctacagtcaccacagcagatacaaccacagctacagtcgccaccgcagata
caaccacagctgcagtcaccacagcagatacagcaacggttggacagtccgactctaatc
aacagcgaccaccaggactactatgacatcctcaaactgctggaagatccagaccatctg
ccttactctctgtctagccagacaactactaacccctccacttcctccaacacagtggct
catgtctcgtccggcctcctctcttccccctctaccccctcctcctctctcttctctcct
tcgtccctggccccctcagaacagcaaccgctccctctggccaacggccactgcagcacg
gacgccctcattaatgtgcgcgaagtactggacaacatgctgcggaccagcgcagaccgg
cagacggttatccattaccggctgcctgaatgggactctgtgtaa
DBGET
integrated database retrieval system
