Oncorhynchus kisutch (coho salmon): 109889275
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Entry
109889275 CDS
T09179
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03020
RNA polymerase
oki03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109889275 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
109889275 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109889275 (polr2c)
03400 DNA repair and recombination proteins [BR:
oki03400
]
109889275 (polr2c)
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109889275 (polr2c)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109889275 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
109889275
NCBI-ProteinID:
XP_020336185
Ensembl:
ENSOKIG00005037822
LinkDB
All DBs
Position
LG4:24004894..24010110
Genome browser
AA seq
275 aa
AA seq
DB search
MPYANQPIVKITELTDENVKFVIENTDLSVANSIRRVFMSEVATIAIDWIQIDANSSVIH
DEFIAHRVGLIPLTSDDVVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNHPRVIPVTSKSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVYPRPEEWPKSEYSEIEEDEVQAPFDPNGKPERFYYNVETCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgctaaccagccaatagtgaagatcacagaactgacggatgagaatgttaaa
tttgtcattgagaacaccgacctgtcggttgcgaattccatccgacgtgtctttatgtca
gaggttgcaacaatagctattgattggattcaaattgatgcaaattcttctgtgatccac
gacgagtttattgctcacagagtgggtcttattccccttaccagtgatgatgttgtggac
aagatgcagtactccagagactgtacatgtgacgatttctgcccagaatgctctgttgaa
ctgacactggacgttcgctgcacagaggaccagactcgccatgtgacctcacgagacctg
ctgtccaaccaccctcgagttattcctgtgacctccaagagtcgagacaatgatcccaat
gactatgttgaacaggatgacattttgctggtgaagcttaggaagggtcaggagctgcgt
ctcagagcttatgccaaaaagggttttggcaaggagcatgccaagtggaaccctacagca
ggggtgtcctttgagtatgacccagacaatgcactgaggcacactgtttatccacggcca
gaggaatggccaaagagtgaatactcagagattgaggaggatgaggtgcaagcacccttt
gaccccaatggaaaacctgagaggttctattacaacgtggagacatgtggctcactgcga
ccggagactatcgtcatgtctgctctggcagtgctgaaaaagaaactgagtgatttacag
actcagctgagccacgaaatccagagtgatgtcctcacgatcaactga
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