Oncorhynchus kisutch (coho salmon): 109889280
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Entry
109889280 CDS
T09179
Symbol
sntb2
Name
(RefSeq) beta-2-syntrophin
KO
K24064
beta-syntrophin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109889280 (sntb2)
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Gene cluster
GFIT
Motif
Pfam:
PH_17
PDZ
PH
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
109889280
NCBI-ProteinID:
XP_020336195
Ensembl:
ENSOKIG00005039167
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Position
LG4:24170983..24179780
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AA seq
587 aa
AA seq
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MAVWTRADKNGQLDLLLRDRWIRVAAELTRETFTLTAETEISGHGNNLDYTNSAGLRNGT
SNGNDPGLASGNSNRGQTSNPELHPNHGALGRSGSPARGGINRGHYDGFNSPSPGKYNRD
NGTNSDFGSPGSSYGSPGSSFSSRHGETSINLESGASEAVRKVRVVKQESGGLGISIKGG
RENRMPILISKIFPGLAADQSRALRVGDAILSVNGNDLREATHDLAVQALKKAGKEVTLE
VKYIREVSPLFKKPSLVADLPWDGVRPQSPNFSGSEDSGSPKHSGAKDRKVILLKMCFIS
RNLTMPDLENRLLELHSPDGQHTVVMRCKDGPSAHSWFTAIHTNIAALLPQTLAHINSYL
GSSTTGSHPQLKHISWLAEQVQLDGGRHQFRPIVMALTEKDILLFESVPWNREAWSTPML
THPLLATRLVHSGSARSSPAQGADLVFATRTGTGRGIESHVFRVETHWDLSSWTRALVQG
AHAAAELIKEVSIGCMLNRQDVRLILHYEKGFTVTREPGETAGGAVLFRYPFEKLKMSAD
DGIRNLYLDFGGPEGEMVFDLHSGPKPMVFVLHSFLSAKLTRLGLLT
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctggacacgagcggacaaaaatggtcaattagatcttttgctccgggaccgc
tggattcgggtagcggccgaattgacccgcgagactttcacattaacggccgaaacagag
ataagcggacacgggaacaacttggattacaccaattcagctggcctgcggaatggaacg
tctaacggaaacgacccgggtttagcgtcgggaaattcgaaccgtggtcaaacatcaaac
ccagaactacatccgaaccatggtgcgctaggacgaagcggtagcccagcgcgcgggggc
atcaaccggggtcactacgacggttttaatagccccagccctggcaagtataatcgtgat
aacggtacgaactctgattttggcagcccggggtccagttacggtagtcctggatctagc
ttcagttccaggcatggcgaaacttccatcaatttagaatccggcgcatcagaagctgtg
cgtaaagttagagttgtaaaacaagagtctggcgggttggggatcagtatcaaggggggt
cgggaaaaccgaatgcccatcctcatatccaagatcttccccggacttgcagctgatcag
agtcgggctcttcgggtcggcgacgcgatcctgtcagtcaatggaaatgacctcagggag
gctacgcacgatctagcggtgcaggctctaaaaaaggccgggaaagaggttacgcttgag
gttaaatatatcagagaggtttccccactgtttaagaagccctccttggtggcagacctg
ccgtgggatggggtgcgtcctcagtcccccaacttcagtggcagtgaggactctgggtcc
cccaaacacagtggggccaaggacaggaaggtcatcctcctcaaaatgtgctttatcagc
agaaacttgaccatgcctgacctggagaacaggctcttggagctgcactcccctgatggc
cagcacacggtagtgatgcgctgtaaggatggccccagcgcccactcctggttcacagcc
atccacaccaacattgctgccctgctgccccagactctggcccacatcaactcctatctg
ggctccagcaccactgggtcacacccccaactcaaacacatcagctggctggcagaacag
gtccagctggatggtgggcggcaccagttccgaccaatcgtcatggcactgacagagaaa
gatatcctgctgtttgaatcagtgccatggaaccgcgaagcctggtccacacccatgctc
acacacccactacttgccacaagactggtgcactctggcagtgcccgcagttccccggca
cagggggcagacctggtgtttgccactcggacgggtacagggcggggcatcgagtcccat
gtgttccgggtggagacacactgggacctgtcctcgtggacccgggcccttgtgcagggg
gcgcatgctgccgcagaactcattaaggaggtctccattggttgcatgctgaacaggcag
gacgttcgcctcatactgcactatgagaagggcttcactgtgacccgggagccaggagag
actgcagggggtgctgtgctcttcagataccccttcgagaagctcaagatgtctgcagat
gacgggatccgcaacctctatctggactttgggggtccagagggtgaaatggtgtttgac
ctgcactctggccccaagcccatggtgtttgttcttcattccttcctgtctgccaaactg
actcgtctgggcctgctgacgtga
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